RNA–Protein interactions for RNA: ENST00000624822.1

LINC01560-202, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

Gene LINC01560, Length 1,238 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-202ENST00000624822 MOB2Q70IA6 237 aa11.55□□□□□ -0.56
LINC01560-202ENST00000624822 ARMC9Q7Z3E5 817 aa11.55□□□□□ -0.56
LINC01560-202ENST00000624822 SAPCD2Q86UD0 394 aa11.55□□□□□ -0.56
LINC01560-202ENST00000624822 CCDC136Q96JN2 1154 aa11.55□□□□□ -0.56
LINC01560-202ENST00000624822 FSD1Q9BTV5 496 aa11.55□□□□□ -0.56
LINC01560-202ENST00000624822 FAM198AQ9UFP1 575 aa11.55□□□□□ -0.56
LINC01560-202ENST00000624822 RPAP1Q9BWH6 1393 aaPredicted RBP11.54□□□□□ -0.56
LINC01560-202ENST00000624822 MAGEB6P1A0A0J9YX57 407 aa11.54□□□□□ -0.56
LINC01560-202ENST00000624822 RASSF10A6NK89 507 aa11.54□□□□□ -0.56
LINC01560-202ENST00000624822 TRIM6-TRIM34B2RNG4 842 aa11.54□□□□□ -0.56
LINC01560-202ENST00000624822 UBE2Q2LH0YL09 131 aa11.54□□□□□ -0.56
LINC01560-202ENST00000624822 ENTPD3O75355 529 aa11.54□□□□□ -0.56
LINC01560-202ENST00000624822 ADD2P35612 726 aa11.54□□□□□ -0.56
LINC01560-202ENST00000624822 USP5P45974 858 aa11.54□□□□□ -0.56
LINC01560-202ENST00000624822 IREB2P48200 963 aaKnown RBP11.54□□□□□ -0.56
LINC01560-202ENST00000624822 RHBDL3P58872 404 aa11.54□□□□□ -0.56
LINC01560-202ENST00000624822 LRRFIP1Q32MZ4 808 aaKnown RBP11.54□□□□□ -0.56
LINC01560-202ENST00000624822 CYP4F22Q6NT55 531 aa11.54□□□□□ -0.56
LINC01560-202ENST00000624822 TMED8Q6PL24 325 aaPredicted RBP11.54□□□□□ -0.56
LINC01560-202ENST00000624822 CERS3Q8IU89 383 aa11.54□□□□□ -0.56
LINC01560-202ENST00000624822 KBTBD3Q8NAB2 608 aa11.54□□□□□ -0.56
LINC01560-202ENST00000624822 TGFBRAP1Q8WUH2 860 aa11.54□□□□□ -0.56
LINC01560-202ENST00000624822 KLRG1Q96E93 195 aa11.54□□□□□ -0.56
LINC01560-202ENST00000624822 HOOK2Q96ED9 719 aa11.54□□□□□ -0.56
LINC01560-202ENST00000624822 TEPSINQ96N21 525 aa11.54□□□□□ -0.56
LINC01560-202ENST00000624822 IDI2Q9BXS1 227 aa11.54□□□□□ -0.56
LINC01560-202ENST00000624822 DDX4Q9NQI0 724 aaKnown RBP11.54□□□□□ -0.56
LINC01560-202ENST00000624822 RFX7Q2KHR2 1363 aa11.54□□□□□ -0.56
LINC01560-202ENST00000624822 SIPA1L1O43166 1804 aa11.53□□□□□ -0.56
LINC01560-202ENST00000624822 WDHD1O75717 1129 aaPredicted RBP11.53□□□□□ -0.56
LINC01560-202ENST00000624822 ECE1P42892 770 aa11.53□□□□□ -0.56
LINC01560-202ENST00000624822 ZNF157P51786 506 aaPredicted RBP11.53□□□□□ -0.56
LINC01560-202ENST00000624822 PPP4CP60510 307 aa11.53□□□□□ -0.56
LINC01560-202ENST00000624822 SLFNL1Q499Z3 407 aa11.53□□□□□ -0.56
LINC01560-202ENST00000624822 DCAF15Q66K64 600 aa11.53□□□□□ -0.56
LINC01560-202ENST00000624822 RGMBQ6NW40 437 aa11.53□□□□□ -0.56
LINC01560-202ENST00000624822 MAPKAPK5Q8IW41 473 aa11.53□□□□□ -0.56
LINC01560-202ENST00000624822 PLEKHM2Q8IWE5 1019 aa11.53□□□□□ -0.56
LINC01560-202ENST00000624822 ZFPM1Q8IX07 1006 aa11.53□□□□□ -0.56
LINC01560-202ENST00000624822 RILPL2Q969X0 211 aa11.53□□□□□ -0.56
LINC01560-202ENST00000624822 CSRNP1Q96S65 589 aa11.53□□□□□ -0.56
LINC01560-202ENST00000624822 STAP2Q9UGK3 403 aa11.53□□□□□ -0.56
LINC01560-202ENST00000624822 LAMB1P07942 1786 aa11.53□□□□□ -0.56
LINC01560-202ENST00000624822 DOCK1Q14185 1865 aa11.53□□□□□ -0.56
LINC01560-202ENST00000624822 DDX60LQ5H9U9 1706 aaKnown RBP11.52□□□□□ -0.56
LINC01560-202ENST00000624822 TCRBV5S4A2TA0A5A2 114 aa11.52□□□□□ -0.57
LINC01560-202ENST00000624822 CHGBP05060 677 aa11.52□□□□□ -0.57
LINC01560-202ENST00000624822 SLC4A8Q2Y0W8 1093 aa11.52□□□□□ -0.57
LINC01560-202ENST00000624822 CENPQQ7L2Z9 268 aaPredicted RBP11.52□□□□□ -0.57
LINC01560-202ENST00000624822 MIGA2Q7L4E1 593 aa11.52□□□□□ -0.57
LINC01560-202ENST00000624822 AIDAQ96BJ3 306 aa11.52□□□□□ -0.57
LINC01560-202ENST00000624822 CAPNS2Q96L46 248 aa11.52□□□□□ -0.57
LINC01560-202ENST00000624822 CRNKL1Q9BZJ0 848 aaKnown RBP11.52□□□□□ -0.57
LINC01560-202ENST00000624822 OSBPL5Q9H0X9 879 aaPredicted RBP11.52□□□□□ -0.57
LINC01560-202ENST00000624822 ARMT1Q9H993 441 aa11.52□□□□□ -0.57
LINC01560-202ENST00000624822 FLT1P17948 1338 aa11.52□□□□□ -0.57
LINC01560-202ENST00000624822 WDR33Q9C0J8 1336 aaKnown RBP11.52□□□□□ -0.57
LINC01560-202ENST00000624822 THSD7BQ9C0I4 1608 aa11.51□□□□□ -0.57
LINC01560-202ENST00000624822 DDTLA6NHG4 134 aaPredicted RBP11.51□□□□□ -0.57
LINC01560-202ENST00000624822 RNF113AO15541 343 aaKnown RBP11.51□□□□□ -0.57
LINC01560-202ENST00000624822 USP2O75604 605 aaPredicted RBP11.51□□□□□ -0.57
LINC01560-202ENST00000624822 MBD4O95243 580 aa11.51□□□□□ -0.57
LINC01560-202ENST00000624822 ZFYP08048 801 aaPredicted RBP11.51□□□□□ -0.57
LINC01560-202ENST00000624822 VEGFBP49765 207 aa11.51□□□□□ -0.57
LINC01560-202ENST00000624822 UBE3CQ15386 1083 aa11.51□□□□□ -0.57
LINC01560-202ENST00000624822 LCORLQ8N3X6 602 aa11.51□□□□□ -0.57
LINC01560-202ENST00000624822 EVI5LQ96CN4 794 aa11.51□□□□□ -0.57
LINC01560-202ENST00000624822 HHIPL1Q96JK4 782 aa11.51□□□□□ -0.57
LINC01560-202ENST00000624822 TRIM34Q9BYJ4 488 aa11.51□□□□□ -0.57
LINC01560-202ENST00000624822 SAP30BPQ9UHR5 308 aaKnown RBP11.51□□□□□ -0.57
LINC01560-202ENST00000624822 STK24Q9Y6E0 443 aa11.51□□□□□ -0.57
LINC01560-202ENST00000624822 COL2A1P02458 1487 aaPredicted RBP11.51□□□□□ -0.57
LINC01560-202ENST00000624822 HLA-DOAP06340 250 aa11.5□□□□□ -0.57
LINC01560-202ENST00000624822 PDE4AP27815 886 aa11.5□□□□□ -0.57
LINC01560-202ENST00000624822 ANKRD13AQ8IZ07 590 aa11.5□□□□□ -0.57
LINC01560-202ENST00000624822 DNAJC5GQ8N7S2 189 aa11.5□□□□□ -0.57
LINC01560-202ENST00000624822 FBXO22Q8NEZ5 403 aa11.5□□□□□ -0.57
LINC01560-202ENST00000624822 SDR42E1Q8WUS8 393 aa11.5□□□□□ -0.57
LINC01560-202ENST00000624822 APPBP2Q92624 585 aa11.5□□□□□ -0.57
LINC01560-202ENST00000624822 WRNIP1Q96S55 665 aa11.5□□□□□ -0.57
LINC01560-202ENST00000624822 RIOK1Q9BRS2 568 aaKnown RBP11.5□□□□□ -0.57
LINC01560-202ENST00000624822 ZNF341Q9BYN7 854 aa11.5□□□□□ -0.57
LINC01560-202ENST00000624822 PUS7LQ9H0K6 701 aaKnown RBP11.5□□□□□ -0.57
LINC01560-202ENST00000624822 OSBPL3Q9H4L5 887 aa11.5□□□□□ -0.57
LINC01560-202ENST00000624822 CSADQ9Y600 493 aa11.5□□□□□ -0.57
LINC01560-202ENST00000624822 AOC2O75106 756 aa11.49□□□□□ -0.57
LINC01560-202ENST00000624822 MAP3K11Q16584 847 aa11.49□□□□□ -0.57
LINC01560-202ENST00000624822 SH3BP5LQ7L8J4 393 aa11.49□□□□□ -0.57
LINC01560-202ENST00000624822 RASAL3Q86YV0 1011 aa11.49□□□□□ -0.57
LINC01560-202ENST00000624822 CRACR2BQ8N4Y2 399 aaPredicted RBP11.49□□□□□ -0.57
LINC01560-202ENST00000624822 CCDC102AQ96A19 550 aa11.49□□□□□ -0.57
LINC01560-202ENST00000624822 SLC10A4Q96EP9 437 aa11.49□□□□□ -0.57
LINC01560-202ENST00000624822 DDRGK1Q96HY6 314 aa11.49□□□□□ -0.57
LINC01560-202ENST00000624822 CLMNQ96JQ2 1002 aa11.49□□□□□ -0.57
LINC01560-202ENST00000624822 DHX36Q9H2U1 1008 aaKnown RBP11.49□□□□□ -0.57
LINC01560-202ENST00000624822 ELP3Q9H9T3 547 aa11.49□□□□□ -0.57
LINC01560-202ENST00000624822 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.49□□□□□ -0.57
LINC01560-202ENST00000624822 PALD1Q9ULE6 856 aa11.49□□□□□ -0.57
LINC01560-202ENST00000624822 SLC4A4Q9Y6R1 1079 aa11.49□□□□□ -0.57
LINC01560-202ENST00000624822 ATRNL1Q5VV63 1379 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms