RNA–Protein interactions for RNA: ENST00000624811.1

USH1C-211, Transcript of USH1 protein network component harmonin, humanhuman

Gene USH1C, Length 1,194 nt, Biotype TEC, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-211ENST00000624811 CYP2E1P05181 493 aaPredicted RBP16.83■□□□□ 0.28
USH1C-211ENST00000624811 ZAP70P43403 619 aa16.83■□□□□ 0.28
USH1C-211ENST00000624811 ADGRA1Q86SQ6 560 aa16.83■□□□□ 0.28
USH1C-211ENST00000624811 MYPNQ86TC9 1320 aa16.83■□□□□ 0.28
USH1C-211ENST00000624811 PIH1D3Q9NQM4 214 aaKnown RBP16.83■□□□□ 0.28
USH1C-211ENST00000624811 SRRDQ9UH36 339 aa16.83■□□□□ 0.28
USH1C-211ENST00000624811 DBNLQ9UJU6 430 aaKnown RBP16.83■□□□□ 0.28
USH1C-211ENST00000624811 ZBED9Q6R2W3 1325 aa16.82■□□□□ 0.28
USH1C-211ENST00000624811 TBC1D12O60347 775 aa16.82■□□□□ 0.28
USH1C-211ENST00000624811 NPM3O75607 178 aaKnown RBP16.82■□□□□ 0.28
USH1C-211ENST00000624811 BCRP11274 1271 aa16.82■□□□□ 0.28
USH1C-211ENST00000624811 RRP1BQ14684 758 aaKnown RBP16.82■□□□□ 0.28
USH1C-211ENST00000624811 MAPKAPK5Q8IW41 473 aa16.82■□□□□ 0.28
USH1C-211ENST00000624811 RAET1EQ8TD07 263 aa16.82■□□□□ 0.28
USH1C-211ENST00000624811 BRCA2P51587 3418 aa16.82■□□□□ 0.28
USH1C-211ENST00000624811 LOC285556D6RIA3 1793 aa16.82■□□□□ 0.28
USH1C-211ENST00000624811 COL2A1P02458 1487 aaPredicted RBP16.81■□□□□ 0.28
USH1C-211ENST00000624811 MYH1P12882 1939 aa16.81■□□□□ 0.28
USH1C-211ENST00000624811 BAG3O95817 575 aa16.81■□□□□ 0.28
USH1C-211ENST00000624811 MAP4K4O95819 1239 aaPredicted RBP16.81■□□□□ 0.28
USH1C-211ENST00000624811 HOXD10P28358 340 aa16.81■□□□□ 0.28
USH1C-211ENST00000624811 PRMT2P55345 433 aa16.81■□□□□ 0.28
USH1C-211ENST00000624811 FCGRTP55899 365 aa16.81■□□□□ 0.28
USH1C-211ENST00000624811 PRKCZQ05513 592 aa16.81■□□□□ 0.28
USH1C-211ENST00000624811 TREML2Q5T2D2 321 aa16.81■□□□□ 0.28
USH1C-211ENST00000624811 CEP85Q6P2H3 762 aa16.81■□□□□ 0.28
USH1C-211ENST00000624811 TGFBRAP1Q8WUH2 860 aa16.81■□□□□ 0.28
USH1C-211ENST00000624811 EAF2Q96CJ1 260 aaPredicted RBP16.81■□□□□ 0.28
USH1C-211ENST00000624811 EXOC6BQ9Y2D4 811 aa16.81■□□□□ 0.28
USH1C-211ENST00000624811 NOP58Q9Y2X3 529 aaKnown RBP16.81■□□□□ 0.28
USH1C-211ENST00000624811 NDUFB9Q9Y6M9 179 aa16.81■□□□□ 0.28
USH1C-211ENST00000624811 DYNLL1P63167 89 aaKnown RBP16.8■□□□□ 0.28
USH1C-211ENST00000624811 SPP2Q13103 211 aa16.8■□□□□ 0.28
USH1C-211ENST00000624811 MTFR1Q15390 333 aa16.8■□□□□ 0.28
USH1C-211ENST00000624811 SMCR8Q8TEV9 937 aaPredicted RBP16.8■□□□□ 0.28
USH1C-211ENST00000624811 BCL11AQ9H165 835 aa16.8■□□□□ 0.28
USH1C-211ENST00000624811 SAP30BPQ9UHR5 308 aaKnown RBP16.8■□□□□ 0.28
USH1C-211ENST00000624811 GABRQQ9UN88 632 aa16.8■□□□□ 0.28
USH1C-211ENST00000624811 DOCK3Q8IZD9 2030 aa16.8■□□□□ 0.28
USH1C-211ENST00000624811 CYP7A1P22680 504 aa16.79■□□□□ 0.28
USH1C-211ENST00000624811 CAP2P40123 477 aa16.79■□□□□ 0.28
USH1C-211ENST00000624811 BIN2Q9UBW5 565 aaPredicted RBP16.79■□□□□ 0.28
USH1C-211ENST00000624811 AGTPBP1Q9UPW5 1226 aa16.79■□□□□ 0.28
USH1C-211ENST00000624811 FLT1P17948 1338 aa16.78■□□□□ 0.28
USH1C-211ENST00000624811 APBB1O00213 710 aa16.78■□□□□ 0.28
USH1C-211ENST00000624811 IDH1O75874 414 aaKnown RBP16.78■□□□□ 0.28
USH1C-211ENST00000624811 PLCG2P16885 1265 aa16.78■□□□□ 0.28
USH1C-211ENST00000624811 GRK4P32298 578 aa16.78■□□□□ 0.28
USH1C-211ENST00000624811 HMGCS2P54868 508 aa16.78■□□□□ 0.28
USH1C-211ENST00000624811 AACSQ86V21 672 aa16.78■□□□□ 0.28
USH1C-211ENST00000624811 ANKRD13CQ8N6S4 541 aa16.78■□□□□ 0.28
USH1C-211ENST00000624811 ZNF512BQ96KM6 892 aaPredicted RBP16.78■□□□□ 0.28
USH1C-211ENST00000624811 PI4KBQ9UBF8 816 aa16.78■□□□□ 0.28
USH1C-211ENST00000624811 PALD1Q9ULE6 856 aa16.78■□□□□ 0.28
USH1C-211ENST00000624811 SLC45A1Q9Y2W3 748 aa16.78■□□□□ 0.28
USH1C-211ENST00000624811 MKI67P46013 3256 aaKnown RBP16.78■□□□□ 0.28
USH1C-211ENST00000624811 PPP4CP60510 307 aa16.77■□□□□ 0.28
USH1C-211ENST00000624811 SHROOM1Q2M3G4 852 aaPredicted RBP16.77■□□□□ 0.28
USH1C-211ENST00000624811 CRACR2BQ8N4Y2 399 aaPredicted RBP16.77■□□□□ 0.28
USH1C-211ENST00000624811 MIGA1Q8NAN2 632 aa16.77■□□□□ 0.28
USH1C-211ENST00000624811 ZNF280CQ8ND82 737 aa16.77■□□□□ 0.28
USH1C-211ENST00000624811 TRIM34Q9BYJ4 488 aa16.77■□□□□ 0.28
USH1C-211ENST00000624811 ANTXR1Q9H6X2 564 aa16.77■□□□□ 0.28
USH1C-211ENST00000624811 IL1RAPL2Q9NP60 686 aa16.77■□□□□ 0.28
USH1C-211ENST00000624811 HERC5Q9UII4 1024 aaKnown RBP16.77■□□□□ 0.28
USH1C-211ENST00000624811 USP17L5A8MUK1 530 aa16.76■□□□□ 0.27
USH1C-211ENST00000624811 TNPO2O14787 897 aaKnown RBP16.76■□□□□ 0.27
USH1C-211ENST00000624811 GDF11O95390 407 aa16.76■□□□□ 0.27
USH1C-211ENST00000624811 JAG1P78504 1218 aa16.76■□□□□ 0.27
USH1C-211ENST00000624811 MAGEB6Q8N7X4 407 aa16.76■□□□□ 0.27
USH1C-211ENST00000624811 DHX36Q9H2U1 1008 aaKnown RBP16.76■□□□□ 0.27
USH1C-211ENST00000624811 DNAJC18Q9H819 358 aa16.76■□□□□ 0.27
USH1C-211ENST00000624811 TAOK2Q9UL54 1235 aa16.76■□□□□ 0.27
USH1C-211ENST00000624811 CCL5P13501 91 aa16.75■□□□□ 0.27
USH1C-211ENST00000624811 ELNP15502 786 aa16.75■□□□□ 0.27
USH1C-211ENST00000624811 ERC1Q8IUD2 1116 aa16.75■□□□□ 0.27
USH1C-211ENST00000624811 PROCA1Q8NCQ7 364 aaPredicted RBP16.75■□□□□ 0.27
USH1C-211ENST00000624811 AS3MTQ9HBK9 375 aa16.75■□□□□ 0.27
USH1C-211ENST00000624811 PNMA3Q9UL41 463 aa16.75■□□□□ 0.27
USH1C-211ENST00000624811 ADCY3O60266 1144 aa16.74■□□□□ 0.27
USH1C-211ENST00000624811 USP5P45974 858 aa16.74■□□□□ 0.27
USH1C-211ENST00000624811 FLT3LGP49771 235 aa16.74■□□□□ 0.27
USH1C-211ENST00000624811 MTMR2Q13614 643 aa16.74■□□□□ 0.27
USH1C-211ENST00000624811 SHISA4Q96DD7 197 aa16.74■□□□□ 0.27
USH1C-211ENST00000624811 RNF208Q9H0X6 261 aa16.74■□□□□ 0.27
USH1C-211ENST00000624811 COG6Q9Y2V7 657 aa16.74■□□□□ 0.27
USH1C-211ENST00000624811 NAV1Q8NEY1 1877 aa16.73■□□□□ 0.27
USH1C-211ENST00000624811 HLA-DOAP06340 250 aa16.73■□□□□ 0.27
USH1C-211ENST00000624811 UBXN2AP68543 259 aa16.73■□□□□ 0.27
USH1C-211ENST00000624811 FOXP4Q8IVH2 680 aaPredicted RBP16.73■□□□□ 0.27
USH1C-211ENST00000624811 SLAIN1Q8ND83 568 aa16.73■□□□□ 0.27
USH1C-211ENST00000624811 RHPN1Q8TCX5 695 aa16.73■□□□□ 0.27
USH1C-211ENST00000624811 UNC93B1Q9H1C4 597 aa16.73■□□□□ 0.27
USH1C-211ENST00000624811 ASCC2Q9H1I8 757 aaPredicted RBP16.73■□□□□ 0.27
USH1C-211ENST00000624811 CEP290O15078 2479 aa16.72■□□□□ 0.27
USH1C-211ENST00000624811 ASNSP08243 561 aa16.72■□□□□ 0.27
USH1C-211ENST00000624811 PABPC4Q13310 644 aaKnown RBP eCLIP16.72■□□□□ 0.27
USH1C-211ENST00000624811 TBC1D2Q9BYX2 928 aa16.72■□□□□ 0.27
USH1C-211ENST00000624811 TMOD4Q9NZQ9 345 aa16.72■□□□□ 0.27
USH1C-211ENST00000624811 PEX10O60683 326 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms