RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 SLF1Q9BQI6 1058 aa17.21■□□□□ 0.35
PMS1-221ENST00000624204 DIP2CQ9Y2E4 1556 aa17.21■□□□□ 0.35
PMS1-221ENST00000624204 GOLGA6CA6NDK9 693 aa17.21■□□□□ 0.35
PMS1-221ENST00000624204 GOLGA6DP0CG33 693 aa17.21■□□□□ 0.35
PMS1-221ENST00000624204 INPP5BP32019 993 aa17.21■□□□□ 0.35
PMS1-221ENST00000624204 TRDNQ13061 729 aa17.21■□□□□ 0.35
PMS1-221ENST00000624204 MAP9Q49MG5 647 aa17.21■□□□□ 0.35
PMS1-221ENST00000624204 MICU3Q86XE3 530 aa17.21■□□□□ 0.35
PMS1-221ENST00000624204 SMYD4Q8IYR2 804 aaPredicted RBP17.21■□□□□ 0.35
PMS1-221ENST00000624204 GOLGA6AQ9NYA3 693 aa17.21■□□□□ 0.35
PMS1-221ENST00000624204 HPCAL4Q9UM19 191 aa17.21■□□□□ 0.35
PMS1-221ENST00000624204 SH3TC1Q8TE82 1336 aa17.21■□□□□ 0.35
PMS1-221ENST00000624204 USP8P40818 1118 aa17.21■□□□□ 0.34
PMS1-221ENST00000624204 TUBB2AQ13885 445 aa17.21■□□□□ 0.34
PMS1-221ENST00000624204 UBE3BQ7Z3V4 1068 aa17.21■□□□□ 0.34
PMS1-221ENST00000624204 ENOX1Q8TC92 643 aaKnown RBP17.21■□□□□ 0.34
PMS1-221ENST00000624204 TUBB2BQ9BVA1 445 aa17.21■□□□□ 0.34
PMS1-221ENST00000624204 ESF1Q9H501 851 aaKnown RBP17.21■□□□□ 0.34
PMS1-221ENST00000624204 SERTAD1Q9UHV2 236 aa17.21■□□□□ 0.34
PMS1-221ENST00000624204 SHTN1A0MZ66 631 aa17.2■□□□□ 0.34
PMS1-221ENST00000624204 DNA2P51530 1060 aa17.2■□□□□ 0.34
PMS1-221ENST00000624204 SETQ01105 290 aaPredicted RBP17.2■□□□□ 0.34
PMS1-221ENST00000624204 ATP2B2Q01814 1243 aa17.2■□□□□ 0.34
PMS1-221ENST00000624204 MLKLQ8NB16 471 aa17.2■□□□□ 0.34
PMS1-221ENST00000624204 HDAC6Q9UBN7 1215 aa17.2■□□□□ 0.34
PMS1-221ENST00000624204 HPS5Q9UPZ3 1129 aa17.2■□□□□ 0.34
PMS1-221ENST00000624204 AKAP12Q02952 1782 aa17.2■□□□□ 0.34
PMS1-221ENST00000624204 MAST3O60307 1309 aa17.2■□□□□ 0.34
PMS1-221ENST00000624204 PPP6R2O75170 966 aa17.2■□□□□ 0.34
PMS1-221ENST00000624204 PRPF6O94906 941 aaKnown RBP17.2■□□□□ 0.34
PMS1-221ENST00000624204 TUBBP07437 444 aa17.2■□□□□ 0.34
PMS1-221ENST00000624204 PTPN12Q05209 780 aaKnown RBP17.2■□□□□ 0.34
PMS1-221ENST00000624204 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.2■□□□□ 0.34
PMS1-221ENST00000624204 ABTB2Q8N961 1025 aa17.2■□□□□ 0.34
PMS1-221ENST00000624204 ANKRD24Q8TF21 1146 aa17.2■□□□□ 0.34
PMS1-221ENST00000624204 JPH2Q9BR39 696 aaPredicted RBP17.2■□□□□ 0.34
PMS1-221ENST00000624204 HELLSQ9NRZ9 838 aa17.2■□□□□ 0.34
PMS1-221ENST00000624204 TTF2Q9UNY4 1162 aaKnown RBP17.2■□□□□ 0.34
PMS1-221ENST00000624204 CDHR2Q9BYE9 1310 aa17.2■□□□□ 0.34
PMS1-221ENST00000624204 CLGNO14967 610 aa17.19■□□□□ 0.34
PMS1-221ENST00000624204 TRIM29Q14134 588 aa17.19■□□□□ 0.34
PMS1-221ENST00000624204 RASGRP2Q7LDG7 609 aa17.19■□□□□ 0.34
PMS1-221ENST00000624204 N4BP2Q86UW6 1770 aaPredicted RBP17.19■□□□□ 0.34
PMS1-221ENST00000624204 SRGAP2O75044 1071 aa17.19■□□□□ 0.34
PMS1-221ENST00000624204 PTPAQ15257 358 aa17.19■□□□□ 0.34
PMS1-221ENST00000624204 IMMTQ16891 758 aaKnown RBP17.19■□□□□ 0.34
PMS1-221ENST00000624204 KCTD19Q17RG1 926 aaPredicted RBP17.19■□□□□ 0.34
PMS1-221ENST00000624204 CAPN7Q9Y6W3 813 aa17.19■□□□□ 0.34
PMS1-221ENST00000624204 MFAP3LO75121 409 aa17.19■□□□□ 0.34
PMS1-221ENST00000624204 CDC25AP30304 524 aa17.19■□□□□ 0.34
PMS1-221ENST00000624204 NAA15Q9BXJ9 866 aaKnown RBP17.19■□□□□ 0.34
PMS1-221ENST00000624204 TRIM10Q9UDY6 481 aa17.19■□□□□ 0.34
PMS1-221ENST00000624204 SUFUQ9UMX1 484 aa17.19■□□□□ 0.34
PMS1-221ENST00000624204 FXR1P51114 621 aaKnown RBP eCLIP17.18■□□□□ 0.34
PMS1-221ENST00000624204 IRAK1P51617 712 aa17.18■□□□□ 0.34
PMS1-221ENST00000624204 GRIN1Q05586 938 aa17.18■□□□□ 0.34
PMS1-221ENST00000624204 GCKRQ14397 625 aa17.18■□□□□ 0.34
PMS1-221ENST00000624204 FILIP1LQ4L180 1135 aa17.18■□□□□ 0.34
PMS1-221ENST00000624204 CMTR1Q8N1G2 835 aaKnown RBP17.18■□□□□ 0.34
PMS1-221ENST00000624204 CAGE1Q8TC20 777 aa17.18■□□□□ 0.34
PMS1-221ENST00000624204 PSMB7Q99436 277 aa17.18■□□□□ 0.34
PMS1-221ENST00000624204 DENND2AQ9ULE3 1009 aa17.18■□□□□ 0.34
PMS1-221ENST00000624204 NEURL1BA8MQ27 555 aa17.18■□□□□ 0.34
PMS1-221ENST00000624204 ZMYM1Q5SVZ6 1142 aa17.18■□□□□ 0.34
PMS1-221ENST00000624204 KCNV1Q6PIU1 500 aa17.18■□□□□ 0.34
PMS1-221ENST00000624204 KRI1Q8N9T8 703 aaKnown RBP17.18■□□□□ 0.34
PMS1-221ENST00000624204 COG1Q8WTW3 980 aa17.18■□□□□ 0.34
PMS1-221ENST00000624204 MED15Q96RN5 788 aa17.18■□□□□ 0.34
PMS1-221ENST00000624204 NUP88Q99567 741 aaPredicted RBP17.18■□□□□ 0.34
PMS1-221ENST00000624204 COPRSQ9NQ92 184 aa17.18■□□□□ 0.34
PMS1-221ENST00000624204 CEMIPQ8WUJ3 1361 aa17.18■□□□□ 0.34
PMS1-221ENST00000624204 A0A1B0GTH6 734 aa17.18■□□□□ 0.34
PMS1-221ENST00000624204 M0R2C6 588 aa17.18■□□□□ 0.34
PMS1-221ENST00000624204 GNGT1P63211 74 aa17.18■□□□□ 0.34
PMS1-221ENST00000624204 NFXL1Q6ZNB6 911 aa17.18■□□□□ 0.34
PMS1-221ENST00000624204 MAPK8IP1Q9UQF2 711 aa17.18■□□□□ 0.34
PMS1-221ENST00000624204 WDR93Q6P2C0 686 aa17.17■□□□□ 0.34
PMS1-221ENST00000624204 GSCP56915 257 aaPredicted RBP17.17■□□□□ 0.34
PMS1-221ENST00000624204 CAPS2Q9BXY5 557 aa17.17■□□□□ 0.34
PMS1-221ENST00000624204 LRRC37A3O60309 1634 aa17.17■□□□□ 0.34
PMS1-221ENST00000624204 GOLGA6BA6NDN3 693 aa17.17■□□□□ 0.34
PMS1-221ENST00000624204 SSBP05455 408 aaKnown RBP eCLIP17.17■□□□□ 0.34
PMS1-221ENST00000624204 AARSP49588 968 aaKnown RBP eCLIP17.17■□□□□ 0.34
PMS1-221ENST00000624204 USP14P54578 494 aa17.17■□□□□ 0.34
PMS1-221ENST00000624204 C1orf141Q5JVX7 400 aa17.17■□□□□ 0.34
PMS1-221ENST00000624204 CNGA4Q8IV77 575 aa17.17■□□□□ 0.34
PMS1-221ENST00000624204 VIPAS39Q9H9C1 493 aa17.17■□□□□ 0.34
PMS1-221ENST00000624204 FRMD3A2A2Y4 597 aa17.16■□□□□ 0.34
PMS1-221ENST00000624204 IFIT1P09914 478 aaKnown RBP17.16■□□□□ 0.34
PMS1-221ENST00000624204 METAP2P50579 478 aaKnown RBP eCLIP17.16■□□□□ 0.34
PMS1-221ENST00000624204 GBP6Q6ZN66 633 aa17.16■□□□□ 0.34
PMS1-221ENST00000624204 MMS19Q96T76 1030 aa17.16■□□□□ 0.34
PMS1-221ENST00000624204 WWC3Q9ULE0 1092 aa17.16■□□□□ 0.34
PMS1-221ENST00000624204 XAGE3Q8WTP9 111 aa17.16■□□□□ 0.34
PMS1-221ENST00000624204 RNF113AO15541 343 aaKnown RBP17.15■□□□□ 0.34
PMS1-221ENST00000624204 ZEB2O60315 1214 aa17.15■□□□□ 0.34
PMS1-221ENST00000624204 ATP2C2O75185 946 aa17.15■□□□□ 0.34
PMS1-221ENST00000624204 GYPCP04921 128 aa17.15■□□□□ 0.34
PMS1-221ENST00000624204 CPLX2Q6PUV4 134 aaKnown RBP17.15■□□□□ 0.34
PMS1-221ENST00000624204 COPS6Q7L5N1 327 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms