RNA–Protein interactions for RNA: ENST00000622755.4

CBWD3-218, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,413 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-218ENST00000622755 FOXP4Q8IVH2 680 aaPredicted RBP14.92□□□□□ -0.02
CBWD3-218ENST00000622755 GCC1Q96CN9 775 aa14.92□□□□□ -0.02
CBWD3-218ENST00000622755 HAUS7Q99871 368 aa14.92□□□□□ -0.02
CBWD3-218ENST00000622755 FLT1P17948 1338 aa14.91□□□□□ -0.02
CBWD3-218ENST00000622755 FOCADQ5VW36 1801 aa14.91□□□□□ -0.02
CBWD3-218ENST00000622755 IGF2BP3O00425 579 aaKnown RBP eCLIP14.91□□□□□ -0.02
CBWD3-218ENST00000622755 IRF6O14896 467 aa14.91□□□□□ -0.02
CBWD3-218ENST00000622755 SMARCA5O60264 1052 aaPredicted RBP14.91□□□□□ -0.02
CBWD3-218ENST00000622755 DOCK1Q14185 1865 aa14.91□□□□□ -0.02
CBWD3-218ENST00000622755 CTU1Q7Z7A3 348 aaKnown RBP14.91□□□□□ -0.02
CBWD3-218ENST00000622755 ZNF296Q8WUU4 475 aaPredicted RBP14.91□□□□□ -0.02
CBWD3-218ENST00000622755 ERO1AQ96HE7 468 aa14.91□□□□□ -0.02
CBWD3-218ENST00000622755 AS3MTQ9HBK9 375 aa14.91□□□□□ -0.02
CBWD3-218ENST00000622755 CXCL11O14625 94 aa14.9□□□□□ -0.02
CBWD3-218ENST00000622755 PDE6AP16499 860 aa14.9□□□□□ -0.02
CBWD3-218ENST00000622755 MAP3K10Q02779 954 aa14.9□□□□□ -0.02
CBWD3-218ENST00000622755 KIF22Q14807 665 aa14.9□□□□□ -0.02
CBWD3-218ENST00000622755 SH3BP5LQ7L8J4 393 aa14.9□□□□□ -0.02
CBWD3-218ENST00000622755 FASTKD5Q7L8L6 764 aaKnown RBP14.9□□□□□ -0.02
CBWD3-218ENST00000622755 ADGRA1Q86SQ6 560 aa14.9□□□□□ -0.02
CBWD3-218ENST00000622755 BRI3BPQ8WY22 251 aa14.9□□□□□ -0.02
CBWD3-218ENST00000622755 MS4A4AQ96JQ5 239 aa14.9□□□□□ -0.02
CBWD3-218ENST00000622755 ZHX2Q9Y6X8 837 aa14.9□□□□□ -0.02
CBWD3-218ENST00000622755 ZNF532Q9HCE3 1301 aa14.89□□□□□ -0.03
CBWD3-218ENST00000622755 DYNLL1P63167 89 aaKnown RBP14.89□□□□□ -0.03
CBWD3-218ENST00000622755 CRHR2Q13324 411 aa14.89□□□□□ -0.03
CBWD3-218ENST00000622755 ABHD8Q96I13 439 aa14.89□□□□□ -0.03
CBWD3-218ENST00000622755 MCOLN1Q9GZU1 580 aa14.89□□□□□ -0.03
CBWD3-218ENST00000622755 RWDD1Q9H446 243 aaPredicted RBP14.89□□□□□ -0.03
CBWD3-218ENST00000622755 GINM1Q9NU53 330 aa14.89□□□□□ -0.03
CBWD3-218ENST00000622755 SAP30BPQ9UHR5 308 aaKnown RBP14.89□□□□□ -0.03
CBWD3-218ENST00000622755 PCDHB15Q9Y5E8 787 aa14.89□□□□□ -0.03
CBWD3-218ENST00000622755 CDK5RAP2Q96SN8 1893 aa14.89□□□□□ -0.03
CBWD3-218ENST00000622755 MYH1P12882 1939 aa14.89□□□□□ -0.03
CBWD3-218ENST00000622755 TTC41PQ6P2S7 1318 aa14.89□□□□□ -0.03
CBWD3-218ENST00000622755 MYH7P12883 1935 aa14.88□□□□□ -0.03
CBWD3-218ENST00000622755 PHF20L1A8MW92 1017 aa14.88□□□□□ -0.03
CBWD3-218ENST00000622755 POLR3DP05423 398 aaPredicted RBP14.88□□□□□ -0.03
CBWD3-218ENST00000622755 ASNSP08243 561 aa14.88□□□□□ -0.03
CBWD3-218ENST00000622755 PTPRAP18433 802 aa14.88□□□□□ -0.03
CBWD3-218ENST00000622755 PALD1Q9ULE6 856 aa14.88□□□□□ -0.03
CBWD3-218ENST00000622755 KCNH4Q9UQ05 1017 aa14.88□□□□□ -0.03
CBWD3-218ENST00000622755 CAP2P40123 477 aa14.87□□□□□ -0.03
CBWD3-218ENST00000622755 SP3Q02447 781 aa14.87□□□□□ -0.03
CBWD3-218ENST00000622755 HDAC1Q13547 482 aaPredicted RBP14.87□□□□□ -0.03
CBWD3-218ENST00000622755 ANKRD45Q5TZF3 282 aa14.87□□□□□ -0.03
CBWD3-218ENST00000622755 GADL1Q6ZQY3 521 aa14.87□□□□□ -0.03
CBWD3-218ENST00000622755 ANKRD23Q86SG2 305 aa14.87□□□□□ -0.03
CBWD3-218ENST00000622755 PARK7Q99497 189 aaKnown RBP14.87□□□□□ -0.03
CBWD3-218ENST00000622755 ATAD5Q96QE3 1844 aa14.86□□□□□ -0.03
CBWD3-218ENST00000622755 CCDC85CA6NKD9 419 aa14.86□□□□□ -0.03
CBWD3-218ENST00000622755 FAM196BA6NMK8 535 aa14.86□□□□□ -0.03
CBWD3-218ENST00000622755 USP17L5A8MUK1 530 aa14.86□□□□□ -0.03
CBWD3-218ENST00000622755 GLRX3O76003 335 aaKnown RBP14.86□□□□□ -0.03
CBWD3-218ENST00000622755 ZFYP08048 801 aaPredicted RBP14.86□□□□□ -0.03
CBWD3-218ENST00000622755 ADD2P35612 726 aa14.86□□□□□ -0.03
CBWD3-218ENST00000622755 PABPC4Q13310 644 aaKnown RBP eCLIP14.86□□□□□ -0.03
CBWD3-218ENST00000622755 UBE3CQ15386 1083 aa14.86□□□□□ -0.03
CBWD3-218ENST00000622755 PTPN18Q99952 460 aa14.86□□□□□ -0.03
CBWD3-218ENST00000622755 SERPINB13Q9UIV8 391 aa14.86□□□□□ -0.03
CBWD3-218ENST00000622755 PNMA3Q9UL41 463 aa14.86□□□□□ -0.03
CBWD3-218ENST00000622755 NAV1Q8NEY1 1877 aa14.86□□□□□ -0.03
CBWD3-218ENST00000622755 TRIM75PA6NK02 468 aa14.85□□□□□ -0.03
CBWD3-218ENST00000622755 BTBD19C9JJ37 291 aa14.85□□□□□ -0.03
CBWD3-218ENST00000622755 PDHXO00330 501 aa14.85□□□□□ -0.03
CBWD3-218ENST00000622755 FAM43AQ8N2R8 423 aa14.85□□□□□ -0.03
CBWD3-218ENST00000622755 EHD4Q9H223 541 aa14.85□□□□□ -0.03
CBWD3-218ENST00000622755 CABP5Q9NP86 173 aa14.85□□□□□ -0.03
CBWD3-218ENST00000622755 MCM9Q9NXL9 1143 aa14.85□□□□□ -0.03
CBWD3-218ENST00000622755 TAOK2Q9UL54 1235 aa14.85□□□□□ -0.03
CBWD3-218ENST00000622755 SUPT16HQ9Y5B9 1047 aaKnown RBP14.85□□□□□ -0.03
CBWD3-218ENST00000622755 TLR2O60603 784 aa14.84□□□□□ -0.03
CBWD3-218ENST00000622755 MX1P20591 662 aa14.84□□□□□ -0.03
CBWD3-218ENST00000622755 SLC4A8Q2Y0W8 1093 aa14.84□□□□□ -0.03
CBWD3-218ENST00000622755 KBTBD3Q8NAB2 608 aa14.84□□□□□ -0.03
CBWD3-218ENST00000622755 ZNF280CQ8ND82 737 aa14.84□□□□□ -0.03
CBWD3-218ENST00000622755 EDC3Q96F86 508 aaKnown RBP14.84□□□□□ -0.03
CBWD3-218ENST00000622755 RIOK1Q9BRS2 568 aaKnown RBP14.84□□□□□ -0.03
CBWD3-218ENST00000622755 ATP8A2Q9NTI2 1148 aa14.84□□□□□ -0.03
CBWD3-218ENST00000622755 TMOD4Q9NZQ9 345 aa14.84□□□□□ -0.03
CBWD3-218ENST00000622755 AFG3L2Q9Y4W6 797 aa14.84□□□□□ -0.03
CBWD3-218ENST00000622755 TRIM17Q9Y577 477 aa14.84□□□□□ -0.03
CBWD3-218ENST00000622755 A0A0G2JLL6 359 aaPredicted RBP14.83□□□□□ -0.03
CBWD3-218ENST00000622755 MBD4O95243 580 aa14.83□□□□□ -0.03
CBWD3-218ENST00000622755 FBXO46Q6PJ61 603 aaPredicted RBP14.83□□□□□ -0.03
CBWD3-218ENST00000622755 PRRT2Q7Z6L0 340 aaPredicted RBP14.83□□□□□ -0.03
CBWD3-218ENST00000622755 SMCR8Q8TEV9 937 aaPredicted RBP14.83□□□□□ -0.03
CBWD3-218ENST00000622755 EFCC1Q9HA90 598 aa14.83□□□□□ -0.03
CBWD3-218ENST00000622755 SLC45A1Q9Y2W3 748 aa14.83□□□□□ -0.03
CBWD3-218ENST00000622755 TCRBV5S4A2TA0A5A2 114 aa14.83□□□□□ -0.04
CBWD3-218ENST00000622755 SPP2Q13103 211 aa14.83□□□□□ -0.04
CBWD3-218ENST00000622755 LCORLQ8N3X6 602 aa14.83□□□□□ -0.04
CBWD3-218ENST00000622755 PROCA1Q8NCQ7 364 aaPredicted RBP14.83□□□□□ -0.04
CBWD3-218ENST00000622755 FSD1Q9BTV5 496 aa14.83□□□□□ -0.04
CBWD3-218ENST00000622755 ARMT1Q9H993 441 aa14.83□□□□□ -0.04
CBWD3-218ENST00000622755 GNRH1P01148 92 aa14.82□□□□□ -0.04
CBWD3-218ENST00000622755 GNAT2P19087 354 aa14.82□□□□□ -0.04
CBWD3-218ENST00000622755 OSBPP22059 807 aa14.82□□□□□ -0.04
CBWD3-218ENST00000622755 CERKLQ49MI3 558 aaPredicted RBP14.82□□□□□ -0.04
CBWD3-218ENST00000622755 METTL16Q86W50 562 aaKnown RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms