RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 FRMPD2Q68DX3 1309 aaPredicted RBP10.44□□□□□ -0.74
HDAC9-229ENST00000622668 PNPLA7Q6ZV29 1317 aa10.44□□□□□ -0.74
HDAC9-229ENST00000622668 FOXP4Q8IVH2 680 aaPredicted RBP10.44□□□□□ -0.74
HDAC9-229ENST00000622668 ERMNQ8TAM6 284 aa10.44□□□□□ -0.74
HDAC9-229ENST00000622668 FAM84BQ96KN1 310 aaPredicted RBP10.44□□□□□ -0.74
HDAC9-229ENST00000622668 UIMC1Q96RL1 719 aa10.44□□□□□ -0.74
HDAC9-229ENST00000622668 HAUS7Q99871 368 aa10.44□□□□□ -0.74
HDAC9-229ENST00000622668 GPR108Q9NPR9 543 aa10.44□□□□□ -0.74
HDAC9-229ENST00000622668 RAD50Q92878 1312 aa10.44□□□□□ -0.74
HDAC9-229ENST00000622668 PDILTQ8N807 584 aa10.44□□□□□ -0.74
HDAC9-229ENST00000622668 CALML4Q96GE6 196 aa10.44□□□□□ -0.74
HDAC9-229ENST00000622668 CAMKK2Q96RR4 588 aa10.44□□□□□ -0.74
HDAC9-229ENST00000622668 ZHX1Q9UKY1 873 aaPredicted RBP10.44□□□□□ -0.74
HDAC9-229ENST00000622668 CAMTA1Q9Y6Y1 1673 aa10.44□□□□□ -0.74
HDAC9-229ENST00000622668 CXCL9Q07325 125 aa10.44□□□□□ -0.74
HDAC9-229ENST00000622668 NCBP1Q09161 790 aaKnown RBP10.44□□□□□ -0.74
HDAC9-229ENST00000622668 ODF2Q5BJF6 829 aa10.44□□□□□ -0.74
HDAC9-229ENST00000622668 TTC16Q8NEE8 873 aa10.44□□□□□ -0.74
HDAC9-229ENST00000622668 BICD1Q96G01 975 aa10.44□□□□□ -0.74
HDAC9-229ENST00000622668 NBPF3Q9H094 633 aa10.44□□□□□ -0.74
HDAC9-229ENST00000622668 MAGEC2Q9UBF1 373 aaPredicted RBP10.44□□□□□ -0.74
HDAC9-229ENST00000622668 hCG_1642624A0A1W2PR95 340 aa10.43□□□□□ -0.74
HDAC9-229ENST00000622668 PRKAB2O43741 272 aa10.43□□□□□ -0.74
HDAC9-229ENST00000622668 GOLGA8HP0CJ92 632 aa10.43□□□□□ -0.74
HDAC9-229ENST00000622668 CPA1P15085 419 aa10.43□□□□□ -0.74
HDAC9-229ENST00000622668 UBE3CQ15386 1083 aa10.43□□□□□ -0.74
HDAC9-229ENST00000622668 KANSL2Q9H9L4 492 aa10.43□□□□□ -0.74
HDAC9-229ENST00000622668 V9GY48 417 aaPredicted RBP10.43□□□□□ -0.74
HDAC9-229ENST00000622668 NRKQ7Z2Y5 1582 aa10.43□□□□□ -0.74
HDAC9-229ENST00000622668 CHMP2AO43633 222 aa10.43□□□□□ -0.74
HDAC9-229ENST00000622668 CCPG1Q9ULG6 757 aa10.43□□□□□ -0.74
HDAC9-229ENST00000622668 TESPA1A2RU30 521 aaPredicted RBP10.43□□□□□ -0.74
HDAC9-229ENST00000622668 DDX39AO00148 427 aaKnown RBP10.43□□□□□ -0.74
HDAC9-229ENST00000622668 SORBS3O60504 671 aa10.43□□□□□ -0.74
HDAC9-229ENST00000622668 JAKMIP3Q5VZ66 844 aa10.43□□□□□ -0.74
HDAC9-229ENST00000622668 GLG1Q92896 1179 aa10.43□□□□□ -0.74
HDAC9-229ENST00000622668 COA7Q96BR5 231 aa10.43□□□□□ -0.74
HDAC9-229ENST00000622668 DYNLL2Q96FJ2 89 aa10.43□□□□□ -0.74
HDAC9-229ENST00000622668 MYOZ2Q9NPC6 264 aa10.43□□□□□ -0.74
HDAC9-229ENST00000622668 UBN2Q6ZU65 1347 aa10.43□□□□□ -0.74
HDAC9-229ENST00000622668 UBE2Q2LH0YL09 131 aa10.42□□□□□ -0.74
HDAC9-229ENST00000622668 RBM25P49756 843 aaKnown RBP10.42□□□□□ -0.74
HDAC9-229ENST00000622668 NLGN2Q8NFZ4 835 aa10.42□□□□□ -0.74
HDAC9-229ENST00000622668 ADARB2Q9NS39 739 aaKnown RBP10.42□□□□□ -0.74
HDAC9-229ENST00000622668 CYP2D7A0A087X1C5 515 aa10.42□□□□□ -0.74
HDAC9-229ENST00000622668 EEPD1Q7L9B9 569 aa10.42□□□□□ -0.74
HDAC9-229ENST00000622668 PNMA1Q8ND90 353 aa10.42□□□□□ -0.74
HDAC9-229ENST00000622668 DRC1Q96MC2 740 aa10.42□□□□□ -0.74
HDAC9-229ENST00000622668 DEFB129Q9H1M3 183 aa10.42□□□□□ -0.74
HDAC9-229ENST00000622668 AZI2Q9H6S1 392 aa10.42□□□□□ -0.74
HDAC9-229ENST00000622668 HOXD10P28358 340 aa10.42□□□□□ -0.74
HDAC9-229ENST00000622668 SYCP1Q15431 976 aa10.42□□□□□ -0.74
HDAC9-229ENST00000622668 LCORLQ8N3X6 602 aa10.42□□□□□ -0.74
HDAC9-229ENST00000622668 TMEM87BQ96K49 555 aa10.42□□□□□ -0.74
HDAC9-229ENST00000622668 TMEM106CQ9BVX2 250 aa10.42□□□□□ -0.74
HDAC9-229ENST00000622668 MLXIPQ9HAP2 919 aa10.42□□□□□ -0.74
HDAC9-229ENST00000622668 SWAP70Q9UH65 585 aa10.42□□□□□ -0.74
HDAC9-229ENST00000622668 PRPF40AO75400 957 aaKnown RBP10.41□□□□□ -0.74
HDAC9-229ENST00000622668 CAPN15O75808 1086 aa10.41□□□□□ -0.74
HDAC9-229ENST00000622668 MCAMP43121 646 aa10.41□□□□□ -0.74
HDAC9-229ENST00000622668 LETM2Q2VYF4 491 aa10.41□□□□□ -0.74
HDAC9-229ENST00000622668 SH3RF3Q8TEJ3 882 aaPredicted RBP10.41□□□□□ -0.74
HDAC9-229ENST00000622668 PDGFDQ9GZP0 370 aaPredicted RBP10.41□□□□□ -0.74
HDAC9-229ENST00000622668 TNPO2O14787 897 aaKnown RBP10.41□□□□□ -0.74
HDAC9-229ENST00000622668 TRIM21P19474 475 aaKnown RBP10.41□□□□□ -0.74
HDAC9-229ENST00000622668 RPS12P25398 132 aaKnown RBP10.41□□□□□ -0.74
HDAC9-229ENST00000622668 SYCP3Q8IZU3 236 aa10.41□□□□□ -0.74
HDAC9-229ENST00000622668 RAET1EQ8TD07 263 aa10.41□□□□□ -0.74
HDAC9-229ENST00000622668 SLC4A9Q96Q91 983 aa10.41□□□□□ -0.74
HDAC9-229ENST00000622668 PHLPP1O60346 1717 aa10.41□□□□□ -0.74
HDAC9-229ENST00000622668 FGAP02671 866 aa10.41□□□□□ -0.74
HDAC9-229ENST00000622668 BACH2Q9BYV9 841 aa10.41□□□□□ -0.74
HDAC9-229ENST00000622668 PIH1D3Q9NQM4 214 aaKnown RBP10.41□□□□□ -0.74
HDAC9-229ENST00000622668 TFIP11Q9UBB9 837 aaKnown RBP10.41□□□□□ -0.74
HDAC9-229ENST00000622668 PPLO60437 1756 aa10.41□□□□□ -0.74
HDAC9-229ENST00000622668 A0A0D9SFI3 127 aa10.41□□□□□ -0.74
HDAC9-229ENST00000622668 ARHGEF16Q5VV41 709 aa10.41□□□□□ -0.74
HDAC9-229ENST00000622668 POTEB2H3BUK9 544 aa10.4□□□□□ -0.74
HDAC9-229ENST00000622668 TBCAO75347 108 aaKnown RBP10.4□□□□□ -0.74
HDAC9-229ENST00000622668 PDE4DQ08499 809 aa10.4□□□□□ -0.74
HDAC9-229ENST00000622668 TNPO1Q92973 898 aaKnown RBP10.4□□□□□ -0.74
HDAC9-229ENST00000622668 RBM28Q9NW13 759 aaKnown RBP10.4□□□□□ -0.74
HDAC9-229ENST00000622668 GBA2Q9HCG7 927 aaPredicted RBP10.4□□□□□ -0.74
HDAC9-229ENST00000622668 USP17L5A8MUK1 530 aa10.4□□□□□ -0.75
HDAC9-229ENST00000622668 GJB2P29033 226 aa10.4□□□□□ -0.75
HDAC9-229ENST00000622668 GNPTABQ3T906 1256 aa10.4□□□□□ -0.75
HDAC9-229ENST00000622668 KCTD1Q719H9 257 aa10.4□□□□□ -0.75
HDAC9-229ENST00000622668 TOP1P11387 765 aaKnown RBP10.39□□□□□ -0.75
HDAC9-229ENST00000622668 AP5M1Q9H0R1 490 aa10.39□□□□□ -0.75
HDAC9-229ENST00000622668 CEMIPQ8WUJ3 1361 aa10.39□□□□□ -0.75
HDAC9-229ENST00000622668 TNKSO95271 1327 aa10.39□□□□□ -0.75
HDAC9-229ENST00000622668 KLRF2D3W0D1 207 aa10.39□□□□□ -0.75
HDAC9-229ENST00000622668 HSPD1P10809 573 aaKnown RBP10.39□□□□□ -0.75
HDAC9-229ENST00000622668 NAP1L1P55209 391 aaKnown RBP10.39□□□□□ -0.75
HDAC9-229ENST00000622668 FOXO4P98177 505 aa10.39□□□□□ -0.75
HDAC9-229ENST00000622668 FBXO11Q86XK2 927 aa10.39□□□□□ -0.75
HDAC9-229ENST00000622668 GLIS2Q9BZE0 524 aaPredicted RBP10.39□□□□□ -0.75
HDAC9-229ENST00000622668 USP17L10C9JJH3 530 aa10.39□□□□□ -0.75
HDAC9-229ENST00000622668 TTLL1O95922 423 aa10.39□□□□□ -0.75
HDAC9-229ENST00000622668 BMP3P12645 472 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms