RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 LUC7LQ9NQ29 371 aaKnown RBP14.59□□□□□ -0.07
MSH6-215ENST00000622629 FANCLQ9NW38 375 aa14.59□□□□□ -0.07
MSH6-215ENST00000622629 RMND1Q9NWS8 449 aa14.59□□□□□ -0.07
MSH6-215ENST00000622629 PUF60Q9UHX1 559 aaKnown RBP14.59□□□□□ -0.07
MSH6-215ENST00000622629 PCDHA5Q9Y5H7 936 aa14.59□□□□□ -0.07
MSH6-215ENST00000622629 CALML3P27482 149 aa14.59□□□□□ -0.07
MSH6-215ENST00000622629 SPAG1Q07617 926 aa14.59□□□□□ -0.07
MSH6-215ENST00000622629 HLFQ16534 295 aa14.59□□□□□ -0.07
MSH6-215ENST00000622629 RAB34Q9BZG1 259 aa14.59□□□□□ -0.07
MSH6-215ENST00000622629 ARFGAP3Q9NP61 516 aa14.59□□□□□ -0.07
MSH6-215ENST00000622629 A0A1W2PQ27 194 aa14.58□□□□□ -0.07
MSH6-215ENST00000622629 A0A1W2PQ64 194 aa14.58□□□□□ -0.07
MSH6-215ENST00000622629 A0A1W2PQD8 194 aa14.58□□□□□ -0.07
MSH6-215ENST00000622629 USP17L12C9JPN9 530 aa14.58□□□□□ -0.07
MSH6-215ENST00000622629 USP17L21D6R901 530 aa14.58□□□□□ -0.07
MSH6-215ENST00000622629 PRKAB2O43741 272 aa14.58□□□□□ -0.07
MSH6-215ENST00000622629 ADD2P35612 726 aa14.58□□□□□ -0.07
MSH6-215ENST00000622629 ASIC1P78348 528 aa14.58□□□□□ -0.07
MSH6-215ENST00000622629 FAM47AQ5JRC9 791 aa14.58□□□□□ -0.07
MSH6-215ENST00000622629 IGSF22Q8N9C0 903 aa14.58□□□□□ -0.07
MSH6-215ENST00000622629 CARD6Q9BX69 1037 aa14.58□□□□□ -0.07
MSH6-215ENST00000622629 DENND2AQ9ULE3 1009 aa14.58□□□□□ -0.07
MSH6-215ENST00000622629 PSMA7O14818 248 aa14.58□□□□□ -0.08
MSH6-215ENST00000622629 KIF23Q02241 960 aaPredicted RBP14.58□□□□□ -0.08
MSH6-215ENST00000622629 PPARAQ07869 468 aa14.58□□□□□ -0.08
MSH6-215ENST00000622629 SLC39A14Q15043 492 aa14.58□□□□□ -0.08
MSH6-215ENST00000622629 MLKLQ8NB16 471 aa14.58□□□□□ -0.08
MSH6-215ENST00000622629 FANCBQ8NB91 859 aa14.58□□□□□ -0.08
MSH6-215ENST00000622629 PDIA6Q15084 440 aa14.58□□□□□ -0.08
MSH6-215ENST00000622629 ZNF569Q5MCW4 686 aa14.58□□□□□ -0.08
MSH6-215ENST00000622629 TTLL11Q8NHH1 800 aa14.58□□□□□ -0.08
MSH6-215ENST00000622629 ATG3Q9NT62 314 aa14.58□□□□□ -0.08
MSH6-215ENST00000622629 ZNF219Q9P2Y4 722 aaPredicted RBP14.58□□□□□ -0.08
MSH6-215ENST00000622629 HIBADHP31937 336 aaKnown RBP14.57□□□□□ -0.08
MSH6-215ENST00000622629 ZNF76P36508 570 aa14.57□□□□□ -0.08
MSH6-215ENST00000622629 MCAMP43121 646 aa14.57□□□□□ -0.08
MSH6-215ENST00000622629 GNAQP50148 359 aa14.57□□□□□ -0.08
MSH6-215ENST00000622629 ADKP55263 362 aaKnown RBP14.57□□□□□ -0.08
MSH6-215ENST00000622629 UBA5Q9GZZ9 404 aa14.57□□□□□ -0.08
MSH6-215ENST00000622629 INCENPQ9NQS7 918 aa14.57□□□□□ -0.08
MSH6-215ENST00000622629 EXOC1Q9NV70 894 aa14.57□□□□□ -0.08
MSH6-215ENST00000622629 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.57□□□□□ -0.083e-7■■■□□ 17.8
MSH6-215ENST00000622629 REREQ9P2R6 1566 aa14.57□□□□□ -0.08
MSH6-215ENST00000622629 TNKSO95271 1327 aa14.57□□□□□ -0.08
MSH6-215ENST00000622629 AKR1B15C9JRZ8 316 aaPredicted RBP14.57□□□□□ -0.08
MSH6-215ENST00000622629 SCARF1Q14162 830 aa14.57□□□□□ -0.08
MSH6-215ENST00000622629 DTHD1Q6ZMT9 781 aa14.57□□□□□ -0.08
MSH6-215ENST00000622629 CRACR2AQ9BSW2 395 aa14.57□□□□□ -0.08
MSH6-215ENST00000622629 UBXN1Q04323 297 aa14.57□□□□□ -0.08
MSH6-215ENST00000622629 TTC38Q5R3I4 469 aa14.57□□□□□ -0.08
MSH6-215ENST00000622629 GBP3Q9H0R5 595 aa14.57□□□□□ -0.08
MSH6-215ENST00000622629 PIH1D3Q9NQM4 214 aaKnown RBP14.57□□□□□ -0.08
MSH6-215ENST00000622629 POLR3EQ9NVU0 708 aa14.57□□□□□ -0.08
MSH6-215ENST00000622629 LDHBP07195 334 aaKnown RBP14.57□□□□□ -0.08
MSH6-215ENST00000622629 EVCP57679 992 aa14.57□□□□□ -0.08
MSH6-215ENST00000622629 AMPD3Q01432 767 aa14.57□□□□□ -0.08
MSH6-215ENST00000622629 PICALMQ13492 652 aa14.57□□□□□ -0.08
MSH6-215ENST00000622629 GNPATO15228 680 aa14.56□□□□□ -0.08
MSH6-215ENST00000622629 FOXO4P98177 505 aa14.56□□□□□ -0.08
MSH6-215ENST00000622629 FEZ1Q99689 392 aa14.56□□□□□ -0.08
MSH6-215ENST00000622629 JADE2Q9NQC1 790 aa14.56□□□□□ -0.08
MSH6-215ENST00000622629 ZSWIM5Q9P217 1185 aa14.56□□□□□ -0.08
MSH6-215ENST00000622629 SAP30BPQ9UHR5 308 aaKnown RBP14.56□□□□□ -0.08
MSH6-215ENST00000622629 CTNND2Q9UQB3 1225 aa14.56□□□□□ -0.08
MSH6-215ENST00000622629 MATR3P43243 847 aaKnown RBP eCLIP14.56□□□□□ -0.08
MSH6-215ENST00000622629 RBM6P78332 1123 aaKnown RBP14.56□□□□□ -0.08
MSH6-215ENST00000622629 DRC1Q96MC2 740 aa14.56□□□□□ -0.08
MSH6-215ENST00000622629 SRRTQ9BXP5 876 aaKnown RBP14.56□□□□□ -0.08
MSH6-215ENST00000622629 CENPHQ9H3R5 247 aa14.56□□□□□ -0.08
MSH6-215ENST00000622629 GUCA1BQ9UMX6 200 aa14.56□□□□□ -0.08
MSH6-215ENST00000622629 AKR1B10O60218 316 aa14.56□□□□□ -0.08
MSH6-215ENST00000622629 RABL6Q3YEC7 729 aaPredicted RBP14.56□□□□□ -0.08
MSH6-215ENST00000622629 ATG9AQ7Z3C6 839 aa14.56□□□□□ -0.08
MSH6-215ENST00000622629 RBM28Q9NW13 759 aaKnown RBP14.56□□□□□ -0.08
MSH6-215ENST00000622629 GOLGA8FQ08AF8 430 aa14.55□□□□□ -0.08
MSH6-215ENST00000622629 GOLGA8DPQ0D2H9 430 aa14.55□□□□□ -0.08
MSH6-215ENST00000622629 KRBA2Q6ZNG9 492 aa14.55□□□□□ -0.08
MSH6-215ENST00000622629 BLZF1Q9H2G9 400 aa14.55□□□□□ -0.08
MSH6-215ENST00000622629 GOLPH3LQ9H4A5 285 aa14.55□□□□□ -0.08
MSH6-215ENST00000622629 OGFRQ9NZT2 677 aa14.55□□□□□ -0.08
MSH6-215ENST00000622629 TUBB4AP04350 444 aa14.55□□□□□ -0.08
MSH6-215ENST00000622629 NR5A1Q13285 461 aa14.55□□□□□ -0.08
MSH6-215ENST00000622629 KIF20BQ96Q89 1820 aa14.55□□□□□ -0.08
MSH6-215ENST00000622629 SIGLEC1Q9BZZ2 1709 aa14.55□□□□□ -0.08
MSH6-215ENST00000622629 USO1O60763 962 aaKnown RBP14.55□□□□□ -0.08
MSH6-215ENST00000622629 CHRNDQ07001 517 aa14.55□□□□□ -0.08
MSH6-215ENST00000622629 ERCC6LQ2NKX8 1250 aa14.55□□□□□ -0.08
MSH6-215ENST00000622629 LETM2Q2VYF4 491 aa14.55□□□□□ -0.08
MSH6-215ENST00000622629 CCDC40Q4G0X9 1142 aa14.55□□□□□ -0.08
MSH6-215ENST00000622629 CT47A1Q5JQC4 288 aaPredicted RBP14.55□□□□□ -0.08
MSH6-215ENST00000622629 CERKQ8TCT0 537 aa14.55□□□□□ -0.08
MSH6-215ENST00000622629 TSG101Q99816 390 aa14.55□□□□□ -0.08
MSH6-215ENST00000622629 RTCBQ9Y3I0 505 aaKnown RBP14.55□□□□□ -0.08
MSH6-215ENST00000622629 ARHGAP6O43182 974 aa14.55□□□□□ -0.08
MSH6-215ENST00000622629 TSGA10IPQ3SY00 556 aa14.55□□□□□ -0.08
MSH6-215ENST00000622629 A0A0G2JLW4 131 aa14.54□□□□□ -0.08
MSH6-215ENST00000622629 IQCEQ6IPM2 695 aa14.54□□□□□ -0.08
MSH6-215ENST00000622629 DESI2Q9BSY9 194 aa14.54□□□□□ -0.08
MSH6-215ENST00000622629 SEPT11Q9NVA2 429 aaKnown RBP14.54□□□□□ -0.08
MSH6-215ENST00000622629 ZNF609O15014 1411 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms