RNA–Protein interactions for RNA: ENST00000622533.4

CHD1L-210, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5

Gene CHD1L, Length 2,937 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-210ENST00000622533 TRIM29Q14134 588 aa14.87□□□□□ -0.03
CHD1L-210ENST00000622533 TTF1Q15361 905 aaPredicted RBP14.87□□□□□ -0.03
CHD1L-210ENST00000622533 PUS3Q9BZE2 481 aaKnown RBP14.87□□□□□ -0.03
CHD1L-210ENST00000622533 GOLGA6L9A6NEM1 432 aa14.86□□□□□ -0.03
CHD1L-210ENST00000622533 CUTAO60888 179 aa14.86□□□□□ -0.03
CHD1L-210ENST00000622533 CNNM3Q8NE01 707 aa14.86□□□□□ -0.03
CHD1L-210ENST00000622533 ISCA1Q9BUE6 129 aa14.86□□□□□ -0.03
CHD1L-210ENST00000622533 PLA2G12BQ9BX93 195 aa14.86□□□□□ -0.03
CHD1L-210ENST00000622533 BRMS1Q9HCU9 246 aa14.86□□□□□ -0.03
CHD1L-210ENST00000622533 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.86□□□□□ -0.03
CHD1L-210ENST00000622533 MROH7-TTC4A0A0A0MT08 1334 aa14.86□□□□□ -0.03
CHD1L-210ENST00000622533 MAP3K15Q6ZN16 1313 aa14.86□□□□□ -0.03
CHD1L-210ENST00000622533 WDHD1O75717 1129 aaPredicted RBP14.86□□□□□ -0.03
CHD1L-210ENST00000622533 CORO7P57737 925 aa14.86□□□□□ -0.03
CHD1L-210ENST00000622533 TRIM28Q13263 835 aaKnown RBP14.86□□□□□ -0.03
CHD1L-210ENST00000622533 RESP18Q5W5W9 173 aa14.86□□□□□ -0.03
CHD1L-210ENST00000622533 VPS37DQ86XT2 251 aa14.86□□□□□ -0.03
CHD1L-210ENST00000622533 RAB11FIP4Q86YS3 637 aa14.86□□□□□ -0.03
CHD1L-210ENST00000622533 TMEM87BQ96K49 555 aa14.86□□□□□ -0.03
CHD1L-210ENST00000622533 ZBTB3Q9H5J0 574 aa14.86□□□□□ -0.03
CHD1L-210ENST00000622533 ATRNO75882 1429 aa14.86□□□□□ -0.03
CHD1L-210ENST00000622533 PPM1EQ8WY54 764 aa14.86□□□□□ -0.03
CHD1L-210ENST00000622533 DDX17Q92841 729 aaKnown RBP14.86□□□□□ -0.03
CHD1L-210ENST00000622533 ZNF512BQ96KM6 892 aaPredicted RBP14.86□□□□□ -0.03
CHD1L-210ENST00000622533 PUS7LQ9H0K6 701 aaKnown RBP14.86□□□□□ -0.03
CHD1L-210ENST00000622533 PRR29P0C7W0 189 aa14.85□□□□□ -0.03
CHD1L-210ENST00000622533 ZAP70P43403 619 aa14.85□□□□□ -0.03
CHD1L-210ENST00000622533 CCDC102BQ68D86 513 aa14.85□□□□□ -0.03
CHD1L-210ENST00000622533 SRGAP1Q7Z6B7 1085 aa14.85□□□□□ -0.03
CHD1L-210ENST00000622533 DEF6Q9H4E7 631 aa14.85□□□□□ -0.03
CHD1L-210ENST00000622533 MYH7P12883 1935 aa14.85□□□□□ -0.03
CHD1L-210ENST00000622533 KRT40Q6A162 431 aa14.85□□□□□ -0.03
CHD1L-210ENST00000622533 TC2NQ8N9U0 490 aa14.85□□□□□ -0.03
CHD1L-210ENST00000622533 L1RE1Q9UN81 338 aa14.85□□□□□ -0.03
CHD1L-210ENST00000622533 SH2B2O14492 632 aaPredicted RBP14.84□□□□□ -0.03
CHD1L-210ENST00000622533 A1BGP04217 495 aa14.84□□□□□ -0.03
CHD1L-210ENST00000622533 ATF3P18847 181 aa14.84□□□□□ -0.03
CHD1L-210ENST00000622533 ADORA1P30542 326 aa14.84□□□□□ -0.03
CHD1L-210ENST00000622533 IFIT5Q13325 482 aaKnown RBP14.84□□□□□ -0.03
CHD1L-210ENST00000622533 TCIRG1Q13488 830 aa14.84□□□□□ -0.03
CHD1L-210ENST00000622533 PTPAQ15257 358 aa14.84□□□□□ -0.03
CHD1L-210ENST00000622533 WASF1Q92558 559 aa14.84□□□□□ -0.03
CHD1L-210ENST00000622533 DACH1Q9UI36 760 aa14.84□□□□□ -0.03
CHD1L-210ENST00000622533 KCPQ6ZWJ8 1503 aa14.84□□□□□ -0.03
CHD1L-210ENST00000622533 RPS6KA5O75582 802 aa14.84□□□□□ -0.03
CHD1L-210ENST00000622533 EIF3JO75822 258 aaKnown RBP14.84□□□□□ -0.03
CHD1L-210ENST00000622533 PCCAP05165 728 aaPredicted RBP14.84□□□□□ -0.03
CHD1L-210ENST00000622533 VSNL1P62760 191 aa14.84□□□□□ -0.03
CHD1L-210ENST00000622533 FAM204AQ9H8W3 233 aa14.84□□□□□ -0.03
CHD1L-210ENST00000622533 DCCP43146 1447 aa14.84□□□□□ -0.03
CHD1L-210ENST00000622533 TNS3Q68CZ2 1445 aa14.84□□□□□ -0.03
CHD1L-210ENST00000622533 STK36Q9NRP7 1315 aa14.84□□□□□ -0.03
CHD1L-210ENST00000622533 SOWAHDA6NJG2 315 aa14.83□□□□□ -0.03
CHD1L-210ENST00000622533 CDC27P30260 824 aa14.83□□□□□ -0.03
CHD1L-210ENST00000622533 PDE4BQ07343 736 aa14.83□□□□□ -0.03
CHD1L-210ENST00000622533 CASP8Q14790 479 aa14.83□□□□□ -0.03
CHD1L-210ENST00000622533 SHC4Q6S5L8 630 aa14.83□□□□□ -0.03
CHD1L-210ENST00000622533 ZCRB1Q8TBF4 217 aaKnown RBP14.83□□□□□ -0.03
CHD1L-210ENST00000622533 PAPPAQ13219 1627 aa14.83□□□□□ -0.03
CHD1L-210ENST00000622533 CSF1RP07333 972 aa14.83□□□□□ -0.04
CHD1L-210ENST00000622533 ADD2P35612 726 aa14.83□□□□□ -0.04
CHD1L-210ENST00000622533 UBE3CQ15386 1083 aa14.83□□□□□ -0.04
CHD1L-210ENST00000622533 HSP90B2PQ58FF3 399 aa14.83□□□□□ -0.04
CHD1L-210ENST00000622533 MAP3K14Q99558 947 aa14.83□□□□□ -0.04
CHD1L-210ENST00000622533 IARSP41252 1262 aaKnown RBP14.82□□□□□ -0.04
CHD1L-210ENST00000622533 APOA5Q6Q788 366 aa14.82□□□□□ -0.04
CHD1L-210ENST00000622533 MICALL1Q8N3F8 863 aa14.82□□□□□ -0.04
CHD1L-210ENST00000622533 HNRNPLLQ8WVV9 542 aaKnown RBP14.82□□□□□ -0.04
CHD1L-210ENST00000622533 MKRN1Q9UHC7 482 aaKnown RBP14.82□□□□□ -0.04
CHD1L-210ENST00000622533 ZBTB43O43298 467 aa14.82□□□□□ -0.04
CHD1L-210ENST00000622533 STX10O60499 249 aa14.82□□□□□ -0.04
CHD1L-210ENST00000622533 TBX2Q13207 712 aaPredicted RBP14.82□□□□□ -0.04
CHD1L-210ENST00000622533 NKX1-1Q15270 411 aaPredicted RBP14.82□□□□□ -0.04
CHD1L-210ENST00000622533 SGMS1Q86VZ5 419 aa14.82□□□□□ -0.04
CHD1L-210ENST00000622533 GOLGB1Q14789 3259 aaKnown RBP14.82□□□□□ -0.04
CHD1L-210ENST00000622533 LRRIQ3A6PVS8 624 aaPredicted RBP14.82□□□□□ -0.04
CHD1L-210ENST00000622533 ERLIN1O75477 346 aa14.82□□□□□ -0.04
CHD1L-210ENST00000622533 SCARF1Q14162 830 aa14.82□□□□□ -0.04
CHD1L-210ENST00000622533 KRI1Q8N9T8 703 aaKnown RBP14.82□□□□□ -0.04
CHD1L-210ENST00000622533 KCNH3Q9ULD8 1083 aa14.82□□□□□ -0.04
CHD1L-210ENST00000622533 PSEN1P49768 467 aa14.81□□□□□ -0.04
CHD1L-210ENST00000622533 CHRNA2Q15822 529 aa14.81□□□□□ -0.04
CHD1L-210ENST00000622533 ZBTB38Q8NAP3 1195 aaPredicted RBP14.81□□□□□ -0.04
CHD1L-210ENST00000622533 TNS2Q63HR2 1409 aa14.81□□□□□ -0.04
CHD1L-210ENST00000622533 USP5P45974 858 aa14.81□□□□□ -0.04
CHD1L-210ENST00000622533 SAFBQ15424 915 aaKnown RBP eCLIP14.81□□□□□ -0.04
CHD1L-210ENST00000622533 KIF4BQ2VIQ3 1234 aa14.81□□□□□ -0.04
CHD1L-210ENST00000622533 METTL24Q5JXM2 366 aa14.81□□□□□ -0.04
CHD1L-210ENST00000622533 ZNF569Q5MCW4 686 aa14.81□□□□□ -0.04
CHD1L-210ENST00000622533 KIF6Q6ZMV9 814 aa14.81□□□□□ -0.04
CHD1L-210ENST00000622533 CPLX3Q8WVH0 158 aa14.81□□□□□ -0.04
CHD1L-210ENST00000622533 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.81□□□□□ -0.04
CHD1L-210ENST00000622533 RAB21Q9UL25 225 aa14.81□□□□□ -0.04
CHD1L-210ENST00000622533 TBC1D2BQ9UPU7 963 aa14.81□□□□□ -0.04
CHD1L-210ENST00000622533 FOXN1O15353 648 aa14.8□□□□□ -0.04
CHD1L-210ENST00000622533 LIFRP42702 1097 aa14.8□□□□□ -0.04
CHD1L-210ENST00000622533 SSRP1Q08945 709 aaKnown RBP14.8□□□□□ -0.04
CHD1L-210ENST00000622533 ALX1Q15699 326 aa14.8□□□□□ -0.04
CHD1L-210ENST00000622533 SLC9C2Q5TAH2 1124 aa14.8□□□□□ -0.04
CHD1L-210ENST00000622533 NFXL1Q6ZNB6 911 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms