RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 ADAM30Q9UKF2 790 aa7.35□□□□□ -1.23
CPNE3-213ENST00000622183 HIF3AQ9Y2N7 669 aa7.35□□□□□ -1.23
CPNE3-213ENST00000622183 MSRB2Q9Y3D2 182 aa7.35□□□□□ -1.23
CPNE3-213ENST00000622183 PRAMEF27A3QJZ7 478 aa7.34□□□□□ -1.23
CPNE3-213ENST00000622183 GNB5O14775 395 aa7.34□□□□□ -1.23
CPNE3-213ENST00000622183 FANCGO15287 622 aa7.34□□□□□ -1.23
CPNE3-213ENST00000622183 WISP1O95388 367 aa7.34□□□□□ -1.23
CPNE3-213ENST00000622183 GUCY2CP25092 1073 aa7.34□□□□□ -1.23
CPNE3-213ENST00000622183 GRK4P32298 578 aa7.34□□□□□ -1.23
CPNE3-213ENST00000622183 FXNQ16595 210 aa7.34□□□□□ -1.23
CPNE3-213ENST00000622183 KIAA1211Q6ZU35 1233 aa7.34□□□□□ -1.23
CPNE3-213ENST00000622183 SVOPQ8N4V2 548 aa7.34□□□□□ -1.23
CPNE3-213ENST00000622183 DEPDC7Q96QD5 511 aa7.34□□□□□ -1.23
CPNE3-213ENST00000622183 PLVAPQ9BX97 442 aa7.34□□□□□ -1.23
CPNE3-213ENST00000622183 WNT10AQ9GZT5 417 aa7.34□□□□□ -1.23
CPNE3-213ENST00000622183 CRIM1Q9NZV1 1036 aa7.34□□□□□ -1.23
CPNE3-213ENST00000622183 CSADQ9Y600 493 aa7.34□□□□□ -1.23
CPNE3-213ENST00000622183 A0A1W2PQH9 124 aa7.33□□□□□ -1.24
CPNE3-213ENST00000622183 SLC22A31A6NKX4 558 aa7.33□□□□□ -1.24
CPNE3-213ENST00000622183 PIK3R2O00459 728 aa7.33□□□□□ -1.24
CPNE3-213ENST00000622183 TMPRSS2O15393 492 aa7.33□□□□□ -1.24
CPNE3-213ENST00000622183 DNAJA2O60884 412 aa7.33□□□□□ -1.24
CPNE3-213ENST00000622183 ARHGEF15O94989 841 aa7.33□□□□□ -1.24
CPNE3-213ENST00000622183 PGRP06401 933 aa7.33□□□□□ -1.24
CPNE3-213ENST00000622183 ELNP15502 786 aa7.33□□□□□ -1.24
CPNE3-213ENST00000622183 SNRPNP63162 240 aaKnown RBP7.33□□□□□ -1.24
CPNE3-213ENST00000622183 PPM1JQ5JR12 505 aa7.33□□□□□ -1.24
CPNE3-213ENST00000622183 ZBTB37Q5TC79 503 aa7.33□□□□□ -1.24
CPNE3-213ENST00000622183 CDCP2Q5VXM1 449 aa7.33□□□□□ -1.24
CPNE3-213ENST00000622183 OVOS1Q6IE37 1185 aa7.33□□□□□ -1.24
CPNE3-213ENST00000622183 SDE2Q6IQ49 451 aa7.33□□□□□ -1.24
CPNE3-213ENST00000622183 TREML4Q6UXN2 200 aa7.33□□□□□ -1.24
CPNE3-213ENST00000622183 TTC6Q86TZ1 520 aa7.33□□□□□ -1.24
CPNE3-213ENST00000622183 JAZF1Q86VZ6 243 aa7.33□□□□□ -1.24
CPNE3-213ENST00000622183 ATG4CQ96DT6 458 aa7.33□□□□□ -1.24
CPNE3-213ENST00000622183 CCDC113Q9H0I3 377 aa7.33□□□□□ -1.24
CPNE3-213ENST00000622183 RNF208Q9H0X6 261 aa7.33□□□□□ -1.24
CPNE3-213ENST00000622183 PPP1R9AQ9ULJ8 1098 aa7.33□□□□□ -1.24
CPNE3-213ENST00000622183 FAM221BA6H8Z2 402 aa7.32□□□□□ -1.24
CPNE3-213ENST00000622183 NME1P15531 152 aaKnown RBP7.32□□□□□ -1.24
CPNE3-213ENST00000622183 NTF4P34130 210 aa7.32□□□□□ -1.24
CPNE3-213ENST00000622183 ETF1P62495 437 aaKnown RBP7.32□□□□□ -1.24
CPNE3-213ENST00000622183 TRIM28Q13263 835 aaKnown RBP7.32□□□□□ -1.24
CPNE3-213ENST00000622183 PPP2R5EQ16537 467 aa7.32□□□□□ -1.24
CPNE3-213ENST00000622183 AKAP4Q5JQC9 854 aa7.32□□□□□ -1.24
CPNE3-213ENST00000622183 NUTM2GQ5VZR2 741 aa7.32□□□□□ -1.24
CPNE3-213ENST00000622183 INTS3Q68E01 1043 aaKnown RBP7.32□□□□□ -1.24
CPNE3-213ENST00000622183 IGF2-ASQ6U949 168 aa7.32□□□□□ -1.24
CPNE3-213ENST00000622183 ACAD11Q709F0 780 aa7.32□□□□□ -1.24
CPNE3-213ENST00000622183 NLRC3Q7RTR2 1065 aa7.32□□□□□ -1.24
CPNE3-213ENST00000622183 NLGN1Q8N2Q7 840 aa7.32□□□□□ -1.24
CPNE3-213ENST00000622183 ZSCAN1Q8NBB4 408 aa7.32□□□□□ -1.24
CPNE3-213ENST00000622183 SMG8Q8ND04 991 aaKnown RBP7.32□□□□□ -1.24
CPNE3-213ENST00000622183 ZNF775Q96BV0 537 aaPredicted RBP7.32□□□□□ -1.24
CPNE3-213ENST00000622183 MRPL18Q9H0U6 180 aaKnown RBP7.32□□□□□ -1.24
CPNE3-213ENST00000622183 CNNM2Q9H8M5 875 aa7.32□□□□□ -1.24
CPNE3-213ENST00000622183 DISC1Q9NRI5 854 aa7.32□□□□□ -1.24
CPNE3-213ENST00000622183 MKL2Q9ULH7 1088 aa7.32□□□□□ -1.24
CPNE3-213ENST00000622183 SLC12A7Q9Y666 1083 aa7.32□□□□□ -1.24
CPNE3-213ENST00000622183 ADH5P11766 374 aa7.31□□□□□ -1.24
CPNE3-213ENST00000622183 LCE2AQ5TA79 106 aaPredicted RBP7.31□□□□□ -1.24
CPNE3-213ENST00000622183 LARP1BQ659C4 914 aaKnown RBP7.31□□□□□ -1.24
CPNE3-213ENST00000622183 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.31□□□□□ -1.24
CPNE3-213ENST00000622183 RNF214Q8ND24 703 aa7.31□□□□□ -1.24
CPNE3-213ENST00000622183 MICAL1Q8TDZ2 1067 aa7.31□□□□□ -1.24
CPNE3-213ENST00000622183 ACSF2Q96CM8 615 aaPredicted RBP7.31□□□□□ -1.24
CPNE3-213ENST00000622183 ATXN3LQ9H3M9 355 aa7.31□□□□□ -1.24
CPNE3-213ENST00000622183 CYP4F12Q9HCS2 524 aa7.31□□□□□ -1.24
CPNE3-213ENST00000622183 ST7Q9NRC1 585 aa7.31□□□□□ -1.24
CPNE3-213ENST00000622183 PICK1Q9NRD5 415 aa7.31□□□□□ -1.24
CPNE3-213ENST00000622183 MAPK8IP1Q9UQF2 711 aa7.31□□□□□ -1.24
CPNE3-213ENST00000622183 CCDC85CA6NKD9 419 aa7.3□□□□□ -1.24
CPNE3-213ENST00000622183 TNFRSF10CO14798 259 aa7.3□□□□□ -1.24
CPNE3-213ENST00000622183 TIAF1O95411 115 aa7.3□□□□□ -1.24
CPNE3-213ENST00000622183 ACRP10323 421 aa7.3□□□□□ -1.24
CPNE3-213ENST00000622183 RASGRF1Q13972 1273 aa7.3□□□□□ -1.24
CPNE3-213ENST00000622183 ARSHQ5FYA8 562 aa7.3□□□□□ -1.24
CPNE3-213ENST00000622183 MCATQ8IVS2 390 aaKnown RBP7.3□□□□□ -1.24
CPNE3-213ENST00000622183 MRPL41Q8IXM3 137 aaKnown RBP7.3□□□□□ -1.24
CPNE3-213ENST00000622183 SLFN12Q8IYM2 578 aa7.3□□□□□ -1.24
CPNE3-213ENST00000622183 FANCD2OSQ96PS1 177 aa7.3□□□□□ -1.24
CPNE3-213ENST00000622183 KLHL3Q9UH77 587 aa7.3□□□□□ -1.24
CPNE3-213ENST00000622183 AP4E1Q9UPM8 1137 aa7.3□□□□□ -1.24
CPNE3-213ENST00000622183 MRPL42Q9Y6G3 142 aaKnown RBP7.3□□□□□ -1.24
CPNE3-213ENST00000622183 FAM229AH3BQW9 127 aa7.29□□□□□ -1.24
CPNE3-213ENST00000622183 PDPK1O15530 556 aa7.29□□□□□ -1.24
CPNE3-213ENST00000622183 YARSP54577 528 aaKnown RBP7.29□□□□□ -1.24
CPNE3-213ENST00000622183 SOX4Q06945 474 aaPredicted RBP7.29□□□□□ -1.24
CPNE3-213ENST00000622183 PRRT3Q5FWE3 981 aa7.29□□□□□ -1.24
CPNE3-213ENST00000622183 UNC5AQ6ZN44 842 aa7.29□□□□□ -1.24
CPNE3-213ENST00000622183 HID1Q8IV36 788 aa7.29□□□□□ -1.24
CPNE3-213ENST00000622183 TMEM130Q8N3G9 435 aa7.29□□□□□ -1.24
CPNE3-213ENST00000622183 ZNF507Q8TCN5 953 aa7.29□□□□□ -1.24
CPNE3-213ENST00000622183 TMEM87BQ96K49 555 aa7.29□□□□□ -1.24
CPNE3-213ENST00000622183 SLC9A7Q96T83 725 aa7.29□□□□□ -1.24
CPNE3-213ENST00000622183 GSX1Q9H4S2 264 aaPredicted RBP7.29□□□□□ -1.24
CPNE3-213ENST00000622183 NOP53Q9NZM5 478 aaKnown RBP7.29□□□□□ -1.24
CPNE3-213ENST00000622183 TJP2Q9UDY2 1190 aa7.29□□□□□ -1.24
CPNE3-213ENST00000622183 CHURC1-FNTBB4DL54 471 aa7.28□□□□□ -1.24
CPNE3-213ENST00000622183 GJB6O95452 261 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms