RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 CLIC6Q96NY7 704 aa11.07□□□□□ -0.64
IGHV3-54-201ENST00000622166 CDC5LQ99459 802 aaKnown RBP11.07□□□□□ -0.64
IGHV3-54-201ENST00000622166 FEZ1Q99689 392 aa11.07□□□□□ -0.64
IGHV3-54-201ENST00000622166 MYL10Q9BUA6 226 aa11.07□□□□□ -0.64
IGHV3-54-201ENST00000622166 SEC31BQ9NQW1 1179 aa11.07□□□□□ -0.64
IGHV3-54-201ENST00000622166 HOOK1Q9UJC3 728 aaKnown RBP11.07□□□□□ -0.64
IGHV3-54-201ENST00000622166 FBXO2Q9UK22 296 aaPredicted RBP11.07□□□□□ -0.64
IGHV3-54-201ENST00000622166 KCNH3Q9ULD8 1083 aa11.07□□□□□ -0.64
IGHV3-54-201ENST00000622166 SLC4A4Q9Y6R1 1079 aa11.07□□□□□ -0.64
IGHV3-54-201ENST00000622166 ZNF831Q5JPB2 1677 aa11.07□□□□□ -0.64
IGHV3-54-201ENST00000622166 ZNF804BA4D1E1 1349 aa11.07□□□□□ -0.64
IGHV3-54-201ENST00000622166 NRAPQ86VF7 1730 aa11.06□□□□□ -0.64
IGHV3-54-201ENST00000622166 CCP110O43303 1012 aa11.06□□□□□ -0.64
IGHV3-54-201ENST00000622166 TDO2P48775 406 aa11.06□□□□□ -0.64
IGHV3-54-201ENST00000622166 SARSP49591 514 aaKnown RBP11.06□□□□□ -0.64
IGHV3-54-201ENST00000622166 BCAMP50895 628 aa11.06□□□□□ -0.64
IGHV3-54-201ENST00000622166 PNOCQ13519 176 aa11.06□□□□□ -0.64
IGHV3-54-201ENST00000622166 SEC23AQ15436 765 aa11.06□□□□□ -0.64
IGHV3-54-201ENST00000622166 LONRF3Q496Y0 759 aa11.06□□□□□ -0.64
IGHV3-54-201ENST00000622166 NT5DC1Q5TFE4 455 aa11.06□□□□□ -0.64
IGHV3-54-201ENST00000622166 FCHSD1Q86WN1 690 aa11.06□□□□□ -0.64
IGHV3-54-201ENST00000622166 FOXP4Q8IVH2 680 aaPredicted RBP11.06□□□□□ -0.64
IGHV3-54-201ENST00000622166 VSTM4Q8IW00 320 aa11.06□□□□□ -0.64
IGHV3-54-201ENST00000622166 DIS3L2Q8IYB7 885 aaKnown RBP11.06□□□□□ -0.64
IGHV3-54-201ENST00000622166 ZMYND15Q9H091 742 aa11.06□□□□□ -0.64
IGHV3-54-201ENST00000622166 TMX1Q9H3N1 280 aa11.06□□□□□ -0.64
IGHV3-54-201ENST00000622166 PCDHA5Q9Y5H7 936 aa11.06□□□□□ -0.64
IGHV3-54-201ENST00000622166 MYH14Q7Z406 1995 aaKnown RBP11.05□□□□□ -0.64
IGHV3-54-201ENST00000622166 ERICH2A1L162 156 aa11.05□□□□□ -0.64
IGHV3-54-201ENST00000622166 BTBD18B2RXH4 712 aa11.05□□□□□ -0.64
IGHV3-54-201ENST00000622166 COL5A3P25940 1745 aaPredicted RBP11.05□□□□□ -0.64
IGHV3-54-201ENST00000622166 LMOD1P29536 600 aaPredicted RBP11.05□□□□□ -0.64
IGHV3-54-201ENST00000622166 GUCY1A2P33402 732 aa11.05□□□□□ -0.64
IGHV3-54-201ENST00000622166 CRKLP46109 303 aaKnown RBP11.05□□□□□ -0.64
IGHV3-54-201ENST00000622166 CHRNDQ07001 517 aa11.05□□□□□ -0.64
IGHV3-54-201ENST00000622166 PPARAQ07869 468 aa11.05□□□□□ -0.64
IGHV3-54-201ENST00000622166 CACNA1SQ13698 1873 aa11.05□□□□□ -0.64
IGHV3-54-201ENST00000622166 CT47A1Q5JQC4 288 aaPredicted RBP11.05□□□□□ -0.64
IGHV3-54-201ENST00000622166 KANK3Q6NY19 840 aa11.05□□□□□ -0.64
IGHV3-54-201ENST00000622166 ZNF654Q8IZM8 581 aa11.05□□□□□ -0.64
IGHV3-54-201ENST00000622166 TRIML1Q8N9V2 468 aa11.05□□□□□ -0.64
IGHV3-54-201ENST00000622166 FANCBQ8NB91 859 aa11.05□□□□□ -0.64
IGHV3-54-201ENST00000622166 CNNM3Q8NE01 707 aa11.05□□□□□ -0.64
IGHV3-54-201ENST00000622166 PPP1R13BQ96KQ4 1090 aa11.05□□□□□ -0.64
IGHV3-54-201ENST00000622166 RNF26Q9BY78 433 aaPredicted RBP11.05□□□□□ -0.64
IGHV3-54-201ENST00000622166 L2HGDHQ9H9P8 463 aa11.05□□□□□ -0.64
IGHV3-54-201ENST00000622166 TRMT1Q9NXH9 659 aaKnown RBP11.05□□□□□ -0.64
IGHV3-54-201ENST00000622166 MAN1B1Q9UKM7 699 aa11.05□□□□□ -0.64
IGHV3-54-201ENST00000622166 CEP131Q9UPN4 1083 aa11.05□□□□□ -0.64
IGHV3-54-201ENST00000622166 SRPRBQ9Y5M8 271 aaKnown RBP11.05□□□□□ -0.64
IGHV3-54-201ENST00000622166 SCN7AQ01118 1682 aa11.04□□□□□ -0.64
IGHV3-54-201ENST00000622166 ROBO1Q9Y6N7 1651 aa11.04□□□□□ -0.64
IGHV3-54-201ENST00000622166 DUOX1Q9NRD9 1551 aa11.04□□□□□ -0.64
IGHV3-54-201ENST00000622166 CASZ1Q86V15 1759 aa11.04□□□□□ -0.64
IGHV3-54-201ENST00000622166 SNAP23O00161 211 aa11.04□□□□□ -0.64
IGHV3-54-201ENST00000622166 RGL2O15211 777 aa11.04□□□□□ -0.64
IGHV3-54-201ENST00000622166 SLU7O95391 586 aaKnown RBP11.04□□□□□ -0.64
IGHV3-54-201ENST00000622166 FGRP09769 529 aa11.04□□□□□ -0.64
IGHV3-54-201ENST00000622166 PCP11498 1178 aaKnown RBP11.04□□□□□ -0.64
IGHV3-54-201ENST00000622166 ATP1A3P13637 1013 aa11.04□□□□□ -0.64
IGHV3-54-201ENST00000622166 CYP7A1P22680 504 aa11.04□□□□□ -0.64
IGHV3-54-201ENST00000622166 UBASH3AP57075 661 aa11.04□□□□□ -0.64
IGHV3-54-201ENST00000622166 TBX2Q13207 712 aaPredicted RBP11.04□□□□□ -0.64
IGHV3-54-201ENST00000622166 UBE4AQ14139 1066 aa11.04□□□□□ -0.64
IGHV3-54-201ENST00000622166 MORC3Q14149 939 aa11.04□□□□□ -0.64
IGHV3-54-201ENST00000622166 TMED8Q6PL24 325 aaPredicted RBP11.04□□□□□ -0.64
IGHV3-54-201ENST00000622166 MLKLQ8NB16 471 aa11.04□□□□□ -0.64
IGHV3-54-201ENST00000622166 ZNF397Q8NF99 534 aaPredicted RBP11.04□□□□□ -0.64
IGHV3-54-201ENST00000622166 ENOX1Q8TC92 643 aaKnown RBP11.04□□□□□ -0.64
IGHV3-54-201ENST00000622166 ZNF592Q92610 1267 aa11.04□□□□□ -0.64
IGHV3-54-201ENST00000622166 DPF2Q92785 391 aa11.04□□□□□ -0.64
IGHV3-54-201ENST00000622166 OGFRQ9NZT2 677 aa11.04□□□□□ -0.64
IGHV3-54-201ENST00000622166 LRP2BPQ9P2M1 347 aa11.04□□□□□ -0.64
IGHV3-54-201ENST00000622166 DACH1Q9UI36 760 aa11.04□□□□□ -0.64
IGHV3-54-201ENST00000622166 THRAP3Q9Y2W1 955 aaKnown RBP11.04□□□□□ -0.64
IGHV3-54-201ENST00000622166 MAGEB6P1A0A0J9YX57 407 aa11.03□□□□□ -0.64
IGHV3-54-201ENST00000622166 UBE2Q2LH0YL09 131 aa11.03□□□□□ -0.64
IGHV3-54-201ENST00000622166 ZBTB22O15209 634 aa11.03□□□□□ -0.64
IGHV3-54-201ENST00000622166 PRPF3O43395 683 aaKnown RBP11.03□□□□□ -0.64
IGHV3-54-201ENST00000622166 BMP6P22004 513 aa11.03□□□□□ -0.64
IGHV3-54-201ENST00000622166 PDE4BQ07343 736 aa11.03□□□□□ -0.64
IGHV3-54-201ENST00000622166 FUT2Q10981 343 aa11.03□□□□□ -0.64
IGHV3-54-201ENST00000622166 ITPK1Q13572 414 aa11.03□□□□□ -0.64
IGHV3-54-201ENST00000622166 POSTNQ15063 836 aa11.03□□□□□ -0.64
IGHV3-54-201ENST00000622166 SF3B3Q15393 1217 aaKnown RBP11.03□□□□□ -0.64
IGHV3-54-201ENST00000622166 CCDC93Q567U6 631 aa11.03□□□□□ -0.64
IGHV3-54-201ENST00000622166 UTP14CQ5TAP6 766 aaKnown RBP11.03□□□□□ -0.64
IGHV3-54-201ENST00000622166 ISM2Q6H9L7 571 aa11.03□□□□□ -0.64
IGHV3-54-201ENST00000622166 SPATA20Q8TB22 786 aa11.03□□□□□ -0.64
IGHV3-54-201ENST00000622166 ESR2Q92731 530 aa11.03□□□□□ -0.64
IGHV3-54-201ENST00000622166 SYTL4Q96C24 671 aaPredicted RBP11.03□□□□□ -0.64
IGHV3-54-201ENST00000622166 RIOK1Q9BRS2 568 aaKnown RBP11.03□□□□□ -0.64
IGHV3-54-201ENST00000622166 BRIP1Q9BX63 1249 aa11.03□□□□□ -0.64
IGHV3-54-201ENST00000622166 GNL3LQ9NVN8 582 aaKnown RBP11.03□□□□□ -0.64
IGHV3-54-201ENST00000622166 FANCLQ9NW38 375 aa11.03□□□□□ -0.64
IGHV3-54-201ENST00000622166 AATFQ9NY61 560 aaKnown RBP eCLIP11.03□□□□□ -0.64
IGHV3-54-201ENST00000622166 SERTAD1Q9UHV2 236 aa11.03□□□□□ -0.64
IGHV3-54-201ENST00000622166 ZNF215Q9UL58 517 aaPredicted RBP11.03□□□□□ -0.64
IGHV3-54-201ENST00000622166 KCNJ14Q9UNX9 436 aa11.03□□□□□ -0.64
IGHV3-54-201ENST00000622166 PHLPP2Q6ZVD8 1323 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms