RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 TLDC1Q6P9B6 456 aa8.51□□□□□ -1.05
TRIM49B-202ENST00000622138 ZNF790Q6PG37 636 aa8.51□□□□□ -1.05
TRIM49B-202ENST00000622138 STOX1Q6ZVD7 989 aa8.51□□□□□ -1.05
TRIM49B-202ENST00000622138 MICALCLQ6ZW33 695 aa8.51□□□□□ -1.05
TRIM49B-202ENST00000622138 BRF1Q92994 677 aa8.51□□□□□ -1.05
TRIM49B-202ENST00000622138 SYTL4Q96C24 671 aaPredicted RBP8.51□□□□□ -1.05
TRIM49B-202ENST00000622138 DBNDD2Q9BQY9 259 aa8.51□□□□□ -1.05
TRIM49B-202ENST00000622138 LRRC2Q9BYS8 371 aa8.51□□□□□ -1.05
TRIM49B-202ENST00000622138 ALDH8A1Q9H2A2 487 aaPredicted RBP8.51□□□□□ -1.05
TRIM49B-202ENST00000622138 ABCB6Q9NP58 842 aa8.51□□□□□ -1.05
TRIM49B-202ENST00000622138 FPGT-TNNI3KV9GXZ4 949 aa8.51□□□□□ -1.05
TRIM49B-202ENST00000622138 AFDNP55196 1824 aaKnown RBP8.51□□□□□ -1.05
TRIM49B-202ENST00000622138 LAMA4Q16363 1823 aa8.51□□□□□ -1.05
TRIM49B-202ENST00000622138 A0A0G2JLW4 131 aa8.51□□□□□ -1.05
TRIM49B-202ENST00000622138 ARHGAP6O43182 974 aa8.51□□□□□ -1.05
TRIM49B-202ENST00000622138 PPFIA2O75334 1257 aa8.51□□□□□ -1.05
TRIM49B-202ENST00000622138 MAGEA8P43361 318 aa8.51□□□□□ -1.05
TRIM49B-202ENST00000622138 FOSBP53539 338 aa8.51□□□□□ -1.05
TRIM49B-202ENST00000622138 PTPN12Q05209 780 aaKnown RBP8.51□□□□□ -1.05
TRIM49B-202ENST00000622138 BRAPQ7Z569 592 aa8.51□□□□□ -1.05
TRIM49B-202ENST00000622138 AOPEPQ8N6M6 819 aa8.51□□□□□ -1.05
TRIM49B-202ENST00000622138 ZNF496Q96IT1 587 aaPredicted RBP8.51□□□□□ -1.05
TRIM49B-202ENST00000622138 METTL22Q9BUU2 404 aaPredicted RBP8.51□□□□□ -1.05
TRIM49B-202ENST00000622138 SLC52A2Q9HAB3 445 aa8.51□□□□□ -1.05
TRIM49B-202ENST00000622138 KLC4Q9NSK0 619 aa8.51□□□□□ -1.05
TRIM49B-202ENST00000622138 ARFGEF2Q9Y6D5 1785 aa8.5□□□□□ -1.05
TRIM49B-202ENST00000622138 CUTAO60888 179 aa8.5□□□□□ -1.05
TRIM49B-202ENST00000622138 CYP21A2P08686 494 aa8.5□□□□□ -1.05
TRIM49B-202ENST00000622138 ATP5JP18859 108 aa8.5□□□□□ -1.05
TRIM49B-202ENST00000622138 RAB27AP51159 221 aa8.5□□□□□ -1.05
TRIM49B-202ENST00000622138 PPFIA1Q13136 1202 aa8.5□□□□□ -1.05
TRIM49B-202ENST00000622138 DRP2Q13474 957 aa8.5□□□□□ -1.05
TRIM49B-202ENST00000622138 SETDB1Q15047 1291 aa8.5□□□□□ -1.05
TRIM49B-202ENST00000622138 ANKRD1Q15327 319 aa8.5□□□□□ -1.05
TRIM49B-202ENST00000622138 C1QTNF12Q5T7M4 302 aa8.5□□□□□ -1.05
TRIM49B-202ENST00000622138 Q6ZUG5 572 aa8.5□□□□□ -1.05
TRIM49B-202ENST00000622138 DDX46Q7L014 1031 aaKnown RBP8.5□□□□□ -1.05
TRIM49B-202ENST00000622138 FTOQ9C0B1 505 aaKnown RBP eCLIP8.5□□□□□ -1.05
TRIM49B-202ENST00000622138 XPO4Q9C0E2 1151 aaKnown RBP8.5□□□□□ -1.05
TRIM49B-202ENST00000622138 VCPKMTQ9H867 229 aa8.5□□□□□ -1.05
TRIM49B-202ENST00000622138 COPRSQ9NQ92 184 aa8.5□□□□□ -1.05
TRIM49B-202ENST00000622138 HMG20BQ9P0W2 317 aa8.5□□□□□ -1.05
TRIM49B-202ENST00000622138 ZNF142P52746 1687 aaPredicted RBP8.5□□□□□ -1.05
TRIM49B-202ENST00000622138 EME2A4GXA9 379 aaPredicted RBP8.49□□□□□ -1.05
TRIM49B-202ENST00000622138 ATP5J2-PTCD1G3V325 749 aa8.49□□□□□ -1.05
TRIM49B-202ENST00000622138 MYO1FO00160 1098 aa8.49□□□□□ -1.05
TRIM49B-202ENST00000622138 EIF3HO15372 352 aaKnown RBP eCLIP8.49□□□□□ -1.05
TRIM49B-202ENST00000622138 MEFVO15553 781 aaPredicted RBP8.49□□□□□ -1.05
TRIM49B-202ENST00000622138 PTCD1O75127 700 aaKnown RBP8.49□□□□□ -1.05
TRIM49B-202ENST00000622138 RASSF9O75901 435 aa8.49□□□□□ -1.05
TRIM49B-202ENST00000622138 SLC8A1P32418 973 aa8.49□□□□□ -1.05
TRIM49B-202ENST00000622138 ZC3H6P61129 1189 aaKnown RBP8.49□□□□□ -1.05
TRIM49B-202ENST00000622138 GNG11P61952 73 aa8.49□□□□□ -1.05
TRIM49B-202ENST00000622138 UBE3BQ7Z3V4 1068 aa8.49□□□□□ -1.05
TRIM49B-202ENST00000622138 RPUSD2Q8IZ73 545 aaKnown RBP8.49□□□□□ -1.05
TRIM49B-202ENST00000622138 FAM76AQ8TAV0 307 aa8.49□□□□□ -1.05
TRIM49B-202ENST00000622138 MKL1Q969V6 931 aa8.49□□□□□ -1.05
TRIM49B-202ENST00000622138 DHX58Q96C10 678 aa8.49□□□□□ -1.05
TRIM49B-202ENST00000622138 SAAL1Q96ER3 474 aa8.49□□□□□ -1.05
TRIM49B-202ENST00000622138 THOC1Q96FV9 657 aaKnown RBP8.49□□□□□ -1.05
TRIM49B-202ENST00000622138 PNKPQ96T60 521 aa8.49□□□□□ -1.05
TRIM49B-202ENST00000622138 ANAPC4Q9UJX5 808 aa8.49□□□□□ -1.05
TRIM49B-202ENST00000622138 PPP2R2CQ9Y2T4 447 aa8.49□□□□□ -1.05
TRIM49B-202ENST00000622138 A0A087WWV3 80 aa8.49□□□□□ -1.05
TRIM49B-202ENST00000622138 PPFIA3O75145 1194 aa8.49□□□□□ -1.05
TRIM49B-202ENST00000622138 WDHD1O75717 1129 aaPredicted RBP8.49□□□□□ -1.05
TRIM49B-202ENST00000622138 AP1G2O75843 785 aa8.49□□□□□ -1.05
TRIM49B-202ENST00000622138 SYF2O95926 243 aaKnown RBP8.49□□□□□ -1.05
TRIM49B-202ENST00000622138 PHKG2P15735 406 aa8.49□□□□□ -1.05
TRIM49B-202ENST00000622138 MCM3P25205 808 aa8.49□□□□□ -1.05
TRIM49B-202ENST00000622138 NEXNQ0ZGT2 675 aa8.49□□□□□ -1.05
TRIM49B-202ENST00000622138 SNCBQ16143 134 aa8.49□□□□□ -1.05
TRIM49B-202ENST00000622138 WDR93Q6P2C0 686 aa8.49□□□□□ -1.05
TRIM49B-202ENST00000622138 ANKLE2Q86XL3 938 aa8.49□□□□□ -1.05
TRIM49B-202ENST00000622138 HOOK2Q96ED9 719 aa8.49□□□□□ -1.05
TRIM49B-202ENST00000622138 RSRC1Q96IZ7 334 aaKnown RBP8.49□□□□□ -1.05
TRIM49B-202ENST00000622138 NEK1Q96PY6 1258 aa8.49□□□□□ -1.05
TRIM49B-202ENST00000622138 CHCHD3Q9NX63 227 aaKnown RBP8.49□□□□□ -1.05
TRIM49B-202ENST00000622138 CBFA2T2O43439 604 aa8.48□□□□□ -1.05
TRIM49B-202ENST00000622138 PHACTR2O75167 634 aa8.48□□□□□ -1.05
TRIM49B-202ENST00000622138 CTDNEP1O95476 244 aa8.48□□□□□ -1.05
TRIM49B-202ENST00000622138 IRAK1P51617 712 aa8.48□□□□□ -1.05
TRIM49B-202ENST00000622138 CDR1P51861 262 aa8.48□□□□□ -1.05
TRIM49B-202ENST00000622138 CASP7P55210 303 aa8.48□□□□□ -1.05
TRIM49B-202ENST00000622138 RABL6Q3YEC7 729 aaPredicted RBP8.48□□□□□ -1.05
TRIM49B-202ENST00000622138 TRIM74Q86UV6 250 aa8.48□□□□□ -1.05
TRIM49B-202ENST00000622138 TRIM73Q86UV7 250 aa8.48□□□□□ -1.05
TRIM49B-202ENST00000622138 IGSF22Q8N9C0 903 aa8.48□□□□□ -1.05
TRIM49B-202ENST00000622138 OR8K1Q8NGG5 319 aa8.48□□□□□ -1.05
TRIM49B-202ENST00000622138 BCAS4Q8TDM0 211 aa8.48□□□□□ -1.05
TRIM49B-202ENST00000622138 PARD3BQ8TEW8 1205 aa8.48□□□□□ -1.05
TRIM49B-202ENST00000622138 WDR24Q96S15 920 aa8.48□□□□□ -1.05
TRIM49B-202ENST00000622138 CRACR2AQ9BSW2 395 aa8.48□□□□□ -1.05
TRIM49B-202ENST00000622138 KIF9Q9HAQ2 790 aa8.48□□□□□ -1.05
TRIM49B-202ENST00000622138 IFNKQ9P0W0 207 aa8.48□□□□□ -1.05
TRIM49B-202ENST00000622138 CDC23Q9UJX2 597 aa8.48□□□□□ -1.05
TRIM49B-202ENST00000622138 GGA2Q9UJY4 613 aa8.48□□□□□ -1.05
TRIM49B-202ENST00000622138 ABCC6O95255 1503 aa8.48□□□□□ -1.05
TRIM49B-202ENST00000622138 GRIN2DO15399 1336 aa8.48□□□□□ -1.05
TRIM49B-202ENST00000622138 ALS2Q96Q42 1657 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms