RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 VTI1BQ9UEU0 232 aa7.93□□□□□ -1.14
BRCA1-229ENST00000621897 VSIG10LQ86VR7 867 aa7.92□□□□□ -1.14
BRCA1-229ENST00000621897 WFDC3Q8IUB2 231 aa7.92□□□□□ -1.14
BRCA1-229ENST00000621897 PLD6Q8N2A8 252 aaKnown RBP7.92□□□□□ -1.14
BRCA1-229ENST00000621897 PHC3Q8NDX5 983 aa7.92□□□□□ -1.14
BRCA1-229ENST00000621897 HEXIM2Q96MH2 286 aaKnown RBP7.92□□□□□ -1.14
BRCA1-229ENST00000621897 MRS2Q9HD23 443 aa7.92□□□□□ -1.14
BRCA1-229ENST00000621897 ANGEL1Q9UNK9 670 aaKnown RBP7.92□□□□□ -1.14
BRCA1-229ENST00000621897 GFRA2O00451 464 aa7.91□□□□□ -1.14
BRCA1-229ENST00000621897 LMNB1P20700 586 aa7.91□□□□□ -1.14
BRCA1-229ENST00000621897 NKG7Q16617 165 aa7.91□□□□□ -1.14
BRCA1-229ENST00000621897 CDC37L1Q7L3B6 337 aa7.91□□□□□ -1.14
BRCA1-229ENST00000621897 ARMCX6Q7L4S7 300 aa7.91□□□□□ -1.14
BRCA1-229ENST00000621897 FAM214BQ7L5A3 538 aa7.91□□□□□ -1.14
BRCA1-229ENST00000621897 GIPC2Q8TF65 315 aa7.91□□□□□ -1.14
BRCA1-229ENST00000621897 BCL2L13Q9BXK5 485 aa7.91□□□□□ -1.14
BRCA1-229ENST00000621897 WNT10AQ9GZT5 417 aa7.91□□□□□ -1.14
BRCA1-229ENST00000621897 MIR1-1HGQ9H1L0 117 aa7.91□□□□□ -1.14
BRCA1-229ENST00000621897 PRDM10Q9NQV6 1147 aa7.91□□□□□ -1.14
BRCA1-229ENST00000621897 SNCAIPQ9Y6H5 919 aa7.91□□□□□ -1.14
BRCA1-229ENST00000621897 RBAK-RBAKDNI3L0D1 243 aa7.9□□□□□ -1.14
BRCA1-229ENST00000621897 SLBPQ14493 270 aaKnown RBP eCLIP7.9□□□□□ -1.14
BRCA1-229ENST00000621897 ZNF574Q6ZN55 896 aaPredicted RBP7.9□□□□□ -1.14
BRCA1-229ENST00000621897 ABI1Q8IZP0 508 aa7.9□□□□□ -1.14
BRCA1-229ENST00000621897 ZNF507Q8TCN5 953 aa7.9□□□□□ -1.14
BRCA1-229ENST00000621897 EOMESO95936 686 aa7.89□□□□□ -1.15
BRCA1-229ENST00000621897 GRK4P32298 578 aa7.89□□□□□ -1.15
BRCA1-229ENST00000621897 OXCT1P55809 520 aa7.89□□□□□ -1.15
BRCA1-229ENST00000621897 ETF1P62495 437 aaKnown RBP7.89□□□□□ -1.15
BRCA1-229ENST00000621897 TMCO4Q5TGY1 634 aa7.89□□□□□ -1.15
BRCA1-229ENST00000621897 KCT2Q8NC54 265 aa7.89□□□□□ -1.15
BRCA1-229ENST00000621897 BCL7CQ8WUZ0 217 aaPredicted RBP7.89□□□□□ -1.15
BRCA1-229ENST00000621897 JARID2Q92833 1246 aaPredicted RBP7.89□□□□□ -1.15
BRCA1-229ENST00000621897 PLAGL2Q9UPG8 496 aa7.89□□□□□ -1.15
BRCA1-229ENST00000621897 ZBTB7CA1YPR0 619 aa7.88□□□□□ -1.15
BRCA1-229ENST00000621897 CEACAM5P06731 702 aa7.88□□□□□ -1.15
BRCA1-229ENST00000621897 BNIP3Q12983 259 aa7.88□□□□□ -1.15
BRCA1-229ENST00000621897 BNC2Q6ZN30 1099 aaPredicted RBP7.88□□□□□ -1.15
BRCA1-229ENST00000621897 SPRED2Q7Z698 418 aa7.88□□□□□ -1.15
BRCA1-229ENST00000621897 FLCNQ8NFG4 579 aa7.88□□□□□ -1.15
BRCA1-229ENST00000621897 NETO1Q8TDF5 533 aa7.88□□□□□ -1.15
BRCA1-229ENST00000621897 PAK6Q9NQU5 681 aaPredicted RBP7.88□□□□□ -1.15
BRCA1-229ENST00000621897 LRIG2O94898 1065 aa7.87□□□□□ -1.15
BRCA1-229ENST00000621897 SLITRK5O94991 958 aa7.87□□□□□ -1.15
BRCA1-229ENST00000621897 RLBP1P12271 317 aa7.87□□□□□ -1.15
BRCA1-229ENST00000621897 ITIH2P19823 946 aa7.87□□□□□ -1.15
BRCA1-229ENST00000621897 IRAK1P51617 712 aa7.87□□□□□ -1.15
BRCA1-229ENST00000621897 MCTP1Q6DN14 999 aa7.87□□□□□ -1.15
BRCA1-229ENST00000621897 RHOVQ96L33 236 aa7.87□□□□□ -1.15
BRCA1-229ENST00000621897 FOXQ1Q9C009 403 aa7.87□□□□□ -1.15
BRCA1-229ENST00000621897 ADGRE2Q9UHX3 823 aa7.87□□□□□ -1.15
BRCA1-229ENST00000621897 CNTNAP4Q9C0A0 1308 aa7.86□□□□□ -1.15
BRCA1-229ENST00000621897 PF4P02776 101 aa7.86□□□□□ -1.15
BRCA1-229ENST00000621897 CAP2P40123 477 aa7.86□□□□□ -1.15
BRCA1-229ENST00000621897 CD96P40200 585 aa7.86□□□□□ -1.15
BRCA1-229ENST00000621897 RPL6Q02878 288 aaKnown RBP7.86□□□□□ -1.15
BRCA1-229ENST00000621897 CAMK2GQ13555 558 aaPredicted RBP7.86□□□□□ -1.15
BRCA1-229ENST00000621897 MRPL58Q14197 206 aaKnown RBP7.86□□□□□ -1.15
BRCA1-229ENST00000621897 TSNAXIP1Q2TAA8 658 aa7.86□□□□□ -1.15
BRCA1-229ENST00000621897 HID1Q8IV36 788 aa7.86□□□□□ -1.15
BRCA1-229ENST00000621897 HOMEZQ8IX15 550 aa7.86□□□□□ -1.15
BRCA1-229ENST00000621897 TP53INP2Q8IXH6 220 aa7.86□□□□□ -1.15
BRCA1-229ENST00000621897 FBXL18Q96ME1 805 aa7.86□□□□□ -1.15
BRCA1-229ENST00000621897 KRTAP4-8Q9BYQ9 185 aa7.86□□□□□ -1.15
BRCA1-229ENST00000621897 MKNK2Q9HBH9 465 aa7.86□□□□□ -1.15
BRCA1-229ENST00000621897 F13A1P00488 732 aa7.85□□□□□ -1.15
BRCA1-229ENST00000621897 GBP2P32456 591 aaPredicted RBP7.85□□□□□ -1.15
BRCA1-229ENST00000621897 LMNB2Q03252 620 aa7.85□□□□□ -1.15
BRCA1-229ENST00000621897 IFI16Q16666 785 aaKnown RBP7.85□□□□□ -1.15
BRCA1-229ENST00000621897 PRAMEF13Q5VWM6 474 aa7.85□□□□□ -1.15
BRCA1-229ENST00000621897 ARHGAP27Q6ZUM4 889 aa7.85□□□□□ -1.15
BRCA1-229ENST00000621897 RIN3Q8TB24 985 aa7.85□□□□□ -1.15
BRCA1-229ENST00000621897 XAGE3Q8WTP9 111 aa7.85□□□□□ -1.15
BRCA1-229ENST00000621897 TMEM74Q96NL1 305 aa7.85□□□□□ -1.15
BRCA1-229ENST00000621897 MIPEPQ99797 713 aa7.85□□□□□ -1.15
BRCA1-229ENST00000621897 DPH2Q9BQC3 489 aaPredicted RBP7.85□□□□□ -1.15
BRCA1-229ENST00000621897 RSRP1Q9BUV0 290 aa7.85□□□□□ -1.15
BRCA1-229ENST00000621897 TJP2Q9UDY2 1190 aa7.85□□□□□ -1.15
BRCA1-229ENST00000621897 SLC5A6Q9Y289 635 aa7.85□□□□□ -1.15
BRCA1-229ENST00000621897 CORINQ9Y5Q5 1042 aa7.85□□□□□ -1.15
BRCA1-229ENST00000621897 COL17A1Q9UMD9 1497 aaPredicted RBP7.84□□□□□ -1.15
BRCA1-229ENST00000621897 FAM221AA4D161 298 aa7.84□□□□□ -1.15
BRCA1-229ENST00000621897 IGF2BP3O00425 579 aaKnown RBP eCLIP7.84□□□□□ -1.15
BRCA1-229ENST00000621897 PGRP06401 933 aa7.84□□□□□ -1.15
BRCA1-229ENST00000621897 FAM160A1Q05DH4 1040 aa7.84□□□□□ -1.15
BRCA1-229ENST00000621897 ZNF326Q5BKZ1 582 aaKnown RBP7.84□□□□□ -1.15
BRCA1-229ENST00000621897 TNKS2Q9H2K2 1166 aa7.84□□□□□ -1.15
BRCA1-229ENST00000621897 COPRSQ9NQ92 184 aa7.84□□□□□ -1.15
BRCA1-229ENST00000621897 GTF2IRD1Q9UHL9 959 aa7.84□□□□□ -1.15
BRCA1-229ENST00000621897 TACC3Q9Y6A5 838 aa7.84□□□□□ -1.15
BRCA1-229ENST00000621897 CILPO75339 1184 aa7.83□□□□□ -1.16
BRCA1-229ENST00000621897 CST3P01034 146 aaPredicted RBP7.83□□□□□ -1.16
BRCA1-229ENST00000621897 CD8BP10966 210 aa7.83□□□□□ -1.16
BRCA1-229ENST00000621897 ZNF16P17020 682 aaPredicted RBP7.83□□□□□ -1.16
BRCA1-229ENST00000621897 TAL1P17542 331 aaPredicted RBP7.83□□□□□ -1.16
BRCA1-229ENST00000621897 MFAP1P55081 439 aaKnown RBP7.83□□□□□ -1.16
BRCA1-229ENST00000621897 NKPD1Q17RQ9 610 aa7.83□□□□□ -1.16
BRCA1-229ENST00000621897 CCDC84Q86UT8 332 aaPredicted RBP7.83□□□□□ -1.16
BRCA1-229ENST00000621897 RELL1Q8IUW5 271 aa7.83□□□□□ -1.16
BRCA1-229ENST00000621897 SPACA3Q8IXA5 215 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms