RNA–Protein interactions for RNA: ENST00000621790.4

TARDBP-226, Transcript of TAR DNA binding protein, human

TSL 5 BASIC

Gene TARDBP, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-226	ENST00000621790	ST18	O60284	1047 aa		13.78	□□□□□ -0.2
TARDBP-226	ENST00000621790	MCM2	P49736	904 aa		13.78	□□□□□ -0.2
TARDBP-226	ENST00000621790	PLCD1	P51178	756 aa		13.78	□□□□□ -0.2
TARDBP-226	ENST00000621790	HIRA	P54198	1017 aa	Predicted RBP	13.78	□□□□□ -0.2
TARDBP-226	ENST00000621790	CACNB3	P54284	484 aa		13.78	□□□□□ -0.2
TARDBP-226	ENST00000621790	GABPA	Q06546	454 aa		13.78	□□□□□ -0.2
TARDBP-226	ENST00000621790	RASA3	Q14644	834 aa		13.78	□□□□□ -0.2
TARDBP-226	ENST00000621790	CCDC178	Q5BJE1	867 aa		13.78	□□□□□ -0.2
TARDBP-226	ENST00000621790	PPP4R3B	Q5MIZ7	849 aa		13.78	□□□□□ -0.2
TARDBP-226	ENST00000621790	ANGEL2	Q5VTE6	544 aa	Known RBP	13.78	□□□□□ -0.2
TARDBP-226	ENST00000621790	RUFY3	Q7L099	469 aa		13.78	□□□□□ -0.2
TARDBP-226	ENST00000621790	DHX32	Q7L7V1	743 aa	Known RBP	13.78	□□□□□ -0.2
TARDBP-226	ENST00000621790	TBC1D10C	Q8IV04	446 aa		13.78	□□□□□ -0.2
TARDBP-226	ENST00000621790	FBXL16	Q8N461	479 aa		13.78	□□□□□ -0.2
TARDBP-226	ENST00000621790	CCDC17	Q96LX7	622 aa		13.78	□□□□□ -0.2
TARDBP-226	ENST00000621790	JAKMIP1	Q96N16	626 aa	Known RBP	13.78	□□□□□ -0.2
TARDBP-226	ENST00000621790	TRIM34	Q9BYJ4	488 aa		13.78	□□□□□ -0.2
TARDBP-226	ENST00000621790	DEFB129	Q9H1M3	183 aa		13.78	□□□□□ -0.2
TARDBP-226	ENST00000621790	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	13.78	□□□□□ -0.2
TARDBP-226	ENST00000621790	SAP30BP	Q9UHR5	308 aa	Known RBP	13.78	□□□□□ -0.2
TARDBP-226	ENST00000621790	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	13.78	□□□□□ -0.2
TARDBP-226	ENST00000621790	CNTNAP1	P78357	1384 aa		13.78	□□□□□ -0.2
TARDBP-226	ENST00000621790	DDX60L	Q5H9U9	1706 aa	Known RBP	13.78	□□□□□ -0.2
TARDBP-226	ENST00000621790	POTEC	B2RU33	542 aa		13.77	□□□□□ -0.21
TARDBP-226	ENST00000621790	CAST	P20810	708 aa	Known RBP	13.77	□□□□□ -0.21
TARDBP-226	ENST00000621790	MCM5	P33992	734 aa		13.77	□□□□□ -0.21
TARDBP-226	ENST00000621790	MAP3K10	Q02779	954 aa		13.77	□□□□□ -0.21
TARDBP-226	ENST00000621790	CTDSPL2	Q05D32	466 aa		13.77	□□□□□ -0.21
TARDBP-226	ENST00000621790	ANKRD1	Q15327	319 aa		13.77	□□□□□ -0.21
TARDBP-226	ENST00000621790	SULF1	Q8IWU6	871 aa		13.77	□□□□□ -0.21
TARDBP-226	ENST00000621790	ZNF444	Q8N0Y2	327 aa	Predicted RBP	13.77	□□□□□ -0.21
TARDBP-226	ENST00000621790	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	13.77	□□□□□ -0.21
TARDBP-226	ENST00000621790	CSRNP1	Q96S65	589 aa		13.77	□□□□□ -0.21
TARDBP-226	ENST00000621790	NBPF3	Q9H094	633 aa		13.77	□□□□□ -0.21
TARDBP-226	ENST00000621790	MKNK2	Q9HBH9	465 aa		13.77	□□□□□ -0.21
TARDBP-226	ENST00000621790	GGA3	Q9NZ52	723 aa		13.77	□□□□□ -0.21
TARDBP-226	ENST00000621790	MYH1	P12882	1939 aa		13.76	□□□□□ -0.21
TARDBP-226	ENST00000621790	LAMB1	P07942	1786 aa		13.76	□□□□□ -0.21
TARDBP-226	ENST00000621790	CYP2D7	A0A087X1C5	515 aa		13.76	□□□□□ -0.21
TARDBP-226	ENST00000621790	DDTL	A6NHG4	134 aa	Predicted RBP	13.76	□□□□□ -0.21
TARDBP-226	ENST00000621790	CYP2D6	P10635	497 aa		13.76	□□□□□ -0.21
TARDBP-226	ENST00000621790	RPS6KB1	P23443	525 aa		13.76	□□□□□ -0.21
TARDBP-226	ENST00000621790	CDK8	P49336	464 aa		13.76	□□□□□ -0.21
TARDBP-226	ENST00000621790	SART3	Q15020	963 aa	Known RBP	13.76	□□□□□ -0.21
TARDBP-226	ENST00000621790	ADCK5	Q3MIX3	580 aa		13.76	□□□□□ -0.21
TARDBP-226	ENST00000621790	SUPT20HL1	Q3ZLR7	823 aa		13.76	□□□□□ -0.21
TARDBP-226	ENST00000621790	DCAF15	Q66K64	600 aa		13.76	□□□□□ -0.21
TARDBP-226	ENST00000621790	STOX1	Q6ZVD7	989 aa		13.76	□□□□□ -0.21
TARDBP-226	ENST00000621790	SH3BP5L	Q7L8J4	393 aa		13.76	□□□□□ -0.21
TARDBP-226	ENST00000621790	TMEM87B	Q96K49	555 aa		13.76	□□□□□ -0.21
TARDBP-226	ENST00000621790	BAZ2A	Q9UIF9	1905 aa	Known RBP	13.76	□□□□□ -0.21
TARDBP-226	ENST00000621790	ANP32A	P39687	249 aa	Known RBP	13.75	□□□□□ -0.21
TARDBP-226	ENST00000621790	NEK4	P51957	841 aa		13.75	□□□□□ -0.21
TARDBP-226	ENST00000621790	TATDN1	Q6P1N9	297 aa		13.75	□□□□□ -0.21
TARDBP-226	ENST00000621790	CDC37L1	Q7L3B6	337 aa		13.75	□□□□□ -0.21
TARDBP-226	ENST00000621790	IQCA1	Q86XH1	822 aa		13.75	□□□□□ -0.21
TARDBP-226	ENST00000621790	ZFPM1	Q8IX07	1006 aa		13.75	□□□□□ -0.21
TARDBP-226	ENST00000621790	MB21D2	Q8IYB1	491 aa	Predicted RBP	13.75	□□□□□ -0.21
TARDBP-226	ENST00000621790	TMTC2	Q8N394	836 aa		13.75	□□□□□ -0.21
TARDBP-226	ENST00000621790	SNX21	Q969T3	373 aa		13.75	□□□□□ -0.21
TARDBP-226	ENST00000621790	TOMM22	Q9NS69	142 aa		13.75	□□□□□ -0.21
TARDBP-226	ENST00000621790	GINM1	Q9NU53	330 aa		13.75	□□□□□ -0.21
TARDBP-226	ENST00000621790	PDRG1	Q9NUG6	133 aa		13.75	□□□□□ -0.21
TARDBP-226	ENST00000621790	TCP11L1	Q9NUJ3	509 aa		13.75	□□□□□ -0.21
TARDBP-226	ENST00000621790	ERICH2	A1L162	156 aa		13.74	□□□□□ -0.21
TARDBP-226	ENST00000621790	EXOSC10	Q01780	885 aa	Known RBP	13.74	□□□□□ -0.21
TARDBP-226	ENST00000621790	LDHD	Q86WU2	507 aa		13.74	□□□□□ -0.21
TARDBP-226	ENST00000621790	TEPSIN	Q96N21	525 aa		13.74	□□□□□ -0.21
TARDBP-226	ENST00000621790	TMEM39B	Q9GZU3	492 aa		13.74	□□□□□ -0.21
TARDBP-226	ENST00000621790	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	13.74	□□□□□ -0.21
TARDBP-226	ENST00000621790	RRAGC	Q9HB90	399 aa		13.74	□□□□□ -0.21
TARDBP-226	ENST00000621790	ZSWIM5	Q9P217	1185 aa		13.74	□□□□□ -0.21
TARDBP-226	ENST00000621790	RBM19	Q9Y4C8	960 aa	Known RBP	13.74	□□□□□ -0.21
TARDBP-226	ENST00000621790	TAF6L	Q9Y6J9	622 aa		13.74	□□□□□ -0.21
TARDBP-226	ENST00000621790	NEDD4	P46934	1319 aa		13.73	□□□□□ -0.21
TARDBP-226	ENST00000621790	TSPY2	A6NKD2	308 aa		13.73	□□□□□ -0.21
TARDBP-226	ENST00000621790		B4E1Z4	1266 aa		13.73	□□□□□ -0.21
TARDBP-226	ENST00000621790	RANBP6	O60518	1105 aa	Known RBP	13.73	□□□□□ -0.21
TARDBP-226	ENST00000621790	KDM4A	O75164	1064 aa		13.73	□□□□□ -0.21
TARDBP-226	ENST00000621790	RASA1	P20936	1047 aa		13.73	□□□□□ -0.21
TARDBP-226	ENST00000621790	NF2	P35240	595 aa		13.73	□□□□□ -0.21
TARDBP-226	ENST00000621790	EAPP	Q56P03	285 aa	Predicted RBP	13.73	□□□□□ -0.21
TARDBP-226	ENST00000621790	KRT26	Q7Z3Y9	468 aa		13.73	□□□□□ -0.21
TARDBP-226	ENST00000621790	CHMP4C	Q96CF2	233 aa		13.73	□□□□□ -0.21
TARDBP-226	ENST00000621790	DYNLL2	Q96FJ2	89 aa		13.73	□□□□□ -0.21
TARDBP-226	ENST00000621790	TTC14	Q96N46	770 aa		13.73	□□□□□ -0.21
TARDBP-226	ENST00000621790	UBAC1	Q9BSL1	405 aa		13.73	□□□□□ -0.21
TARDBP-226	ENST00000621790	AGXT2	Q9BYV1	514 aa		13.73	□□□□□ -0.21
TARDBP-226	ENST00000621790	PLIN4	Q96Q06	1357 aa		13.72	□□□□□ -0.21
TARDBP-226	ENST00000621790	GOLGB1	Q14789	3259 aa	Known RBP	13.72	□□□□□ -0.21
TARDBP-226	ENST00000621790	ASTN2	O75129	1339 aa	Predicted RBP	13.72	□□□□□ -0.21
TARDBP-226	ENST00000621790	PRC1	O43663	620 aa		13.72	□□□□□ -0.21
TARDBP-226	ENST00000621790	TSPY3	P0CV98	308 aa		13.72	□□□□□ -0.21
TARDBP-226	ENST00000621790	TSPY8	P0CW00	308 aa		13.72	□□□□□ -0.21
TARDBP-226	ENST00000621790	LIFR	P42702	1097 aa		13.72	□□□□□ -0.21
TARDBP-226	ENST00000621790	FGD1	P98174	961 aa		13.72	□□□□□ -0.21
TARDBP-226	ENST00000621790	BECN1	Q14457	450 aa		13.72	□□□□□ -0.21
TARDBP-226	ENST00000621790	CERKL	Q49MI3	558 aa	Predicted RBP	13.72	□□□□□ -0.21
TARDBP-226	ENST00000621790	RRP12	Q5JTH9	1297 aa	Known RBP	13.72	□□□□□ -0.21
TARDBP-226	ENST00000621790	NEDD1	Q8NHV4	660 aa		13.72	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms