RNA–Protein interactions for RNA: ENST00000621217.4

GGA3-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 4,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-222ENST00000621217 RBM17Q96I25 401 aaKnown RBP10.36□□□□□ -0.75
GGA3-222ENST00000621217 LLPHQ9BRT6 129 aaKnown RBP10.36□□□□□ -0.75
GGA3-222ENST00000621217 MAPK8IP1Q9UQF2 711 aa10.36□□□□□ -0.75
GGA3-222ENST00000621217 THRAP3Q9Y2W1 955 aaKnown RBP10.36□□□□□ -0.75
GGA3-222ENST00000621217 BTBD18B2RXH4 712 aa10.35□□□□□ -0.75
GGA3-222ENST00000621217 COBLO75128 1261 aa10.35□□□□□ -0.75
GGA3-222ENST00000621217 CIAO1O76071 339 aa10.35□□□□□ -0.75
GGA3-222ENST00000621217 ZNF174Q15697 407 aa10.35□□□□□ -0.75
GGA3-222ENST00000621217 CDK5RAP3Q96JB5 506 aa10.35□□□□□ -0.75
GGA3-222ENST00000621217 CNNM2Q9H8M5 875 aa10.35□□□□□ -0.75
GGA3-222ENST00000621217 SEC63Q9UGP8 760 aaKnown RBP10.35□□□□□ -0.75
GGA3-222ENST00000621217 UBN2Q6ZU65 1347 aa10.35□□□□□ -0.75
GGA3-222ENST00000621217 CCDC194A0A1B0GVG4 234 aa10.35□□□□□ -0.75
GGA3-222ENST00000621217 RFX5P48382 616 aaPredicted RBP10.35□□□□□ -0.75
GGA3-222ENST00000621217 GOLGA8FQ08AF8 430 aa10.35□□□□□ -0.75
GGA3-222ENST00000621217 GOLGA8DPQ0D2H9 430 aa10.35□□□□□ -0.75
GGA3-222ENST00000621217 PAXIP1Q6ZW49 1069 aaPredicted RBP10.35□□□□□ -0.75
GGA3-222ENST00000621217 CERKQ8TCT0 537 aa10.35□□□□□ -0.75
GGA3-222ENST00000621217 SMARCE1Q969G3 411 aa10.35□□□□□ -0.75
GGA3-222ENST00000621217 VPS54Q9P1Q0 977 aa10.35□□□□□ -0.75
GGA3-222ENST00000621217 POLR2DO15514 142 aaKnown RBP10.35□□□□□ -0.75
GGA3-222ENST00000621217 RABL6Q3YEC7 729 aaPredicted RBP10.35□□□□□ -0.75
GGA3-222ENST00000621217 CCDC102AQ96A19 550 aa10.35□□□□□ -0.75
GGA3-222ENST00000621217 DBNDD1Q9H9R9 158 aa10.35□□□□□ -0.75
GGA3-222ENST00000621217 RPS6KA4O75676 772 aa10.34□□□□□ -0.75
GGA3-222ENST00000621217 SNW1Q13573 536 aaKnown RBP10.34□□□□□ -0.75
GGA3-222ENST00000621217 ZYXQ15942 572 aaKnown RBP10.34□□□□□ -0.75
GGA3-222ENST00000621217 FILIP1LQ4L180 1135 aa10.34□□□□□ -0.75
GGA3-222ENST00000621217 AKNAD1Q5T1N1 836 aa10.34□□□□□ -0.75
GGA3-222ENST00000621217 GPIHBP1Q8IV16 184 aa10.34□□□□□ -0.75
GGA3-222ENST00000621217 CARMIL3Q8ND23 1372 aa10.34□□□□□ -0.75
GGA3-222ENST00000621217 MMP10P09238 476 aa10.34□□□□□ -0.75
GGA3-222ENST00000621217 ADD2P35612 726 aa10.34□□□□□ -0.75
GGA3-222ENST00000621217 TXLNAP40222 546 aa10.34□□□□□ -0.75
GGA3-222ENST00000621217 ST3GAL1Q11201 340 aa10.34□□□□□ -0.75
GGA3-222ENST00000621217 DNAI1Q9UI46 699 aa10.34□□□□□ -0.75
GGA3-222ENST00000621217 ANKRD26Q9UPS8 1709 aa10.34□□□□□ -0.75
GGA3-222ENST00000621217 GOLGA8HP0CJ92 632 aa10.34□□□□□ -0.75
GGA3-222ENST00000621217 PFKFB1P16118 471 aa10.34□□□□□ -0.75
GGA3-222ENST00000621217 MCM7P33993 719 aa10.34□□□□□ -0.75
GGA3-222ENST00000621217 TFAP4Q01664 338 aa10.34□□□□□ -0.75
GGA3-222ENST00000621217 DPCR1Q3MIW9 517 aa10.34□□□□□ -0.75
GGA3-222ENST00000621217 FBXO18Q8NFZ0 1043 aa10.34□□□□□ -0.75
GGA3-222ENST00000621217 ZNF274Q96GC6 653 aaPredicted RBP10.34□□□□□ -0.75
GGA3-222ENST00000621217 ZNF287Q9HBT7 754 aa10.34□□□□□ -0.75
GGA3-222ENST00000621217 MINPP1Q9UNW1 487 aa10.34□□□□□ -0.75
GGA3-222ENST00000621217 BAZ2BQ9UIF8 2168 aaKnown RBP10.33□□□□□ -0.75
GGA3-222ENST00000621217 PPARAQ07869 468 aa10.33□□□□□ -0.76
GGA3-222ENST00000621217 NFIXQ14938 502 aa10.33□□□□□ -0.76
GGA3-222ENST00000621217 TTF2Q9UNY4 1162 aaKnown RBP10.33□□□□□ -0.76
GGA3-222ENST00000621217 RIPOR2Q9Y4F9 1068 aa10.33□□□□□ -0.76
GGA3-222ENST00000621217 SPATA31A5Q5VU36 1347 aa10.33□□□□□ -0.76
GGA3-222ENST00000621217 SPATA31A7Q8IWB4 1347 aa10.33□□□□□ -0.76
GGA3-222ENST00000621217 OVOS2A0A0G2JMS6 1433 aa10.33□□□□□ -0.76
GGA3-222ENST00000621217 VWA3AA6NCI4 1184 aa10.33□□□□□ -0.76
GGA3-222ENST00000621217 GNAT2P19087 354 aa10.33□□□□□ -0.76
GGA3-222ENST00000621217 NAP1L1P55209 391 aaKnown RBP10.33□□□□□ -0.76
GGA3-222ENST00000621217 XPO4Q9C0E2 1151 aaKnown RBP10.33□□□□□ -0.76
GGA3-222ENST00000621217 GPCPD1Q9NPB8 672 aa10.33□□□□□ -0.76
GGA3-222ENST00000621217 CPDO75976 1380 aa10.33□□□□□ -0.76
GGA3-222ENST00000621217 CBFA2T2O43439 604 aa10.33□□□□□ -0.76
GGA3-222ENST00000621217 CAMTA2O94983 1202 aa10.33□□□□□ -0.76
GGA3-222ENST00000621217 GABPB1Q06547 395 aaPredicted RBP10.33□□□□□ -0.76
GGA3-222ENST00000621217 SYT10Q6XYQ8 523 aa10.33□□□□□ -0.76
GGA3-222ENST00000621217 GBP3Q9H0R5 595 aa10.33□□□□□ -0.76
GGA3-222ENST00000621217 GOLPH3LQ9H4A5 285 aa10.33□□□□□ -0.76
GGA3-222ENST00000621217 STK32BQ9NY57 414 aa10.33□□□□□ -0.76
GGA3-222ENST00000621217 KCNH3Q9ULD8 1083 aa10.33□□□□□ -0.76
GGA3-222ENST00000621217 COL5A2P05997 1499 aaPredicted RBP10.33□□□□□ -0.76
GGA3-222ENST00000621217 PEAK1Q9H792 1746 aa10.33□□□□□ -0.76
GGA3-222ENST00000621217 KRT18P05783 430 aaKnown RBP10.33□□□□□ -0.76
GGA3-222ENST00000621217 RXRBP28702 533 aa10.33□□□□□ -0.76
GGA3-222ENST00000621217 NKX1-1Q15270 411 aaPredicted RBP10.33□□□□□ -0.76
GGA3-222ENST00000621217 BRAPQ7Z569 592 aa10.33□□□□□ -0.76
GGA3-222ENST00000621217 SLF2Q8IX21 1173 aa10.33□□□□□ -0.76
GGA3-222ENST00000621217 CACTINQ8WUQ7 758 aaKnown RBP10.33□□□□□ -0.76
GGA3-222ENST00000621217 EEF2KMTQ96G04 330 aa10.33□□□□□ -0.76
GGA3-222ENST00000621217 PDLIM2Q96JY6 352 aa10.33□□□□□ -0.76
GGA3-222ENST00000621217 NARFQ9UHQ1 456 aa10.33□□□□□ -0.76
GGA3-222ENST00000621217 H0YIN7 160 aa10.32□□□□□ -0.76
GGA3-222ENST00000621217 NEMFO60524 1076 aa10.32□□□□□ -0.76
GGA3-222ENST00000621217 ERCC3P19447 782 aa10.32□□□□□ -0.76
GGA3-222ENST00000621217 CACNB3P54284 484 aa10.32□□□□□ -0.76
GGA3-222ENST00000621217 NR5A1Q13285 461 aa10.32□□□□□ -0.76
GGA3-222ENST00000621217 INTS5Q6P9B9 1019 aaKnown RBP10.32□□□□□ -0.76
GGA3-222ENST00000621217 APOA5Q6Q788 366 aa10.32□□□□□ -0.76
GGA3-222ENST00000621217 TBC1D10CQ8IV04 446 aa10.32□□□□□ -0.76
GGA3-222ENST00000621217 GRAMD1CQ8IYS0 662 aa10.32□□□□□ -0.76
GGA3-222ENST00000621217 CAMTA1Q9Y6Y1 1673 aa10.32□□□□□ -0.76
GGA3-222ENST00000621217 USP17L8P0C7I0 530 aa10.32□□□□□ -0.76
GGA3-222ENST00000621217 MNAT1P51948 309 aa10.32□□□□□ -0.76
GGA3-222ENST00000621217 GSTO1P78417 241 aa10.32□□□□□ -0.76
GGA3-222ENST00000621217 OGFOD1Q8N543 542 aa10.32□□□□□ -0.76
GGA3-222ENST00000621217 CAGE1Q8TC20 777 aa10.32□□□□□ -0.76
GGA3-222ENST00000621217 DYNLL2Q96FJ2 89 aa10.32□□□□□ -0.76
GGA3-222ENST00000621217 CCDC43Q96MW1 224 aaKnown RBP10.32□□□□□ -0.76
GGA3-222ENST00000621217 RASSF4Q9H2L5 321 aa10.32□□□□□ -0.76
GGA3-222ENST00000621217 GPR108Q9NPR9 543 aa10.32□□□□□ -0.76
GGA3-222ENST00000621217 RNF216Q9NWF9 866 aaPredicted RBP10.32□□□□□ -0.76
GGA3-222ENST00000621217 ZSWIM5Q9P217 1185 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms