RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 PLCH2O75038 1416 aa7.97□□□□□ -1.13
COLCA1-205ENST00000620864 DYTNA2CJ06 578 aa7.97□□□□□ -1.13
COLCA1-205ENST00000620864 H0YIN7 160 aa7.97□□□□□ -1.13
COLCA1-205ENST00000620864 ARHGAP4P98171 946 aa7.97□□□□□ -1.13
COLCA1-205ENST00000620864 UBXN1Q04323 297 aa7.97□□□□□ -1.13
COLCA1-205ENST00000620864 DENND2CQ68D51 928 aa7.97□□□□□ -1.13
COLCA1-205ENST00000620864 ANKRD13DQ6ZTN6 518 aa7.97□□□□□ -1.13
COLCA1-205ENST00000620864 ZNF335Q9H4Z2 1342 aaPredicted RBP7.97□□□□□ -1.13
COLCA1-205ENST00000620864 HLA-DOAP06340 250 aa7.97□□□□□ -1.13
COLCA1-205ENST00000620864 CFAP221Q4G0U5 840 aa7.97□□□□□ -1.13
COLCA1-205ENST00000620864 SIRT1Q96EB6 747 aa7.97□□□□□ -1.13
COLCA1-205ENST00000620864 BAIAP2L1Q9UHR4 511 aa7.97□□□□□ -1.13
COLCA1-205ENST00000620864 MRFAP1Q9Y605 127 aa7.97□□□□□ -1.13
COLCA1-205ENST00000620864 KIAA1107Q9UPP5 1409 aa7.97□□□□□ -1.13
COLCA1-205ENST00000620864 B4DLN1 442 aa7.97□□□□□ -1.13
COLCA1-205ENST00000620864 PSMD7P51665 324 aa7.97□□□□□ -1.13
COLCA1-205ENST00000620864 MRPL12P52815 198 aaKnown RBP7.97□□□□□ -1.13
COLCA1-205ENST00000620864 TRIM60Q495X7 471 aa7.97□□□□□ -1.13
COLCA1-205ENST00000620864 TMEM67Q5HYA8 995 aa7.97□□□□□ -1.13
COLCA1-205ENST00000620864 GIMAP6Q6P9H5 292 aa7.97□□□□□ -1.13
COLCA1-205ENST00000620864 TMTC1Q8IUR5 882 aa7.97□□□□□ -1.13
COLCA1-205ENST00000620864 USP6NLQ92738 828 aa7.97□□□□□ -1.13
COLCA1-205ENST00000620864 CENPKQ9BS16 269 aa7.97□□□□□ -1.13
COLCA1-205ENST00000620864 FAM204AQ9H8W3 233 aa7.97□□□□□ -1.13
COLCA1-205ENST00000620864 NIP7Q9Y221 180 aaKnown RBP eCLIP7.97□□□□□ -1.13
COLCA1-205ENST00000620864 E9PMD0 336 aa7.97□□□□□ -1.13
COLCA1-205ENST00000620864 FLOT1O75955 427 aa7.97□□□□□ -1.13
COLCA1-205ENST00000620864 HPDP32754 393 aaPredicted RBP7.97□□□□□ -1.13
COLCA1-205ENST00000620864 R3HDM1Q15032 1099 aaKnown RBP7.97□□□□□ -1.13
COLCA1-205ENST00000620864 GEN1Q17RS7 908 aa7.97□□□□□ -1.13
COLCA1-205ENST00000620864 KRT27Q7Z3Y8 459 aa7.97□□□□□ -1.13
COLCA1-205ENST00000620864 CCHCR1Q8TD31 782 aa7.97□□□□□ -1.13
COLCA1-205ENST00000620864 NLRP7Q8WX94 980 aa7.97□□□□□ -1.13
COLCA1-205ENST00000620864 ORAI2Q96SN7 254 aa7.97□□□□□ -1.13
COLCA1-205ENST00000620864 PHACTR2O75167 634 aa7.96□□□□□ -1.13
COLCA1-205ENST00000620864 NCBP1Q09161 790 aaKnown RBP7.96□□□□□ -1.13
COLCA1-205ENST00000620864 FAM71BQ8TC56 605 aa7.96□□□□□ -1.13
COLCA1-205ENST00000620864 MORC4Q8TE76 937 aa7.96□□□□□ -1.13
COLCA1-205ENST00000620864 RUNDC3BQ96NL0 473 aa7.96□□□□□ -1.13
COLCA1-205ENST00000620864 KAT14Q9H8E8 782 aa7.96□□□□□ -1.13
COLCA1-205ENST00000620864 F13A1P00488 732 aa7.96□□□□□ -1.13
COLCA1-205ENST00000620864 MYL5Q02045 173 aa7.96□□□□□ -1.13
COLCA1-205ENST00000620864 CCDC25Q86WR0 208 aa7.96□□□□□ -1.13
COLCA1-205ENST00000620864 EPS15L1Q9UBC2 864 aa7.96□□□□□ -1.13
COLCA1-205ENST00000620864 ABCC2Q92887 1545 aa7.96□□□□□ -1.13
COLCA1-205ENST00000620864 PALM3A6NDB9 673 aaPredicted RBP7.96□□□□□ -1.14
COLCA1-205ENST00000620864 WDR46O15213 610 aaKnown RBP7.96□□□□□ -1.14
COLCA1-205ENST00000620864 ARHGAP6O43182 974 aa7.96□□□□□ -1.14
COLCA1-205ENST00000620864 RANBP6O60518 1105 aaKnown RBP7.96□□□□□ -1.14
COLCA1-205ENST00000620864 PHBP35232 272 aa7.96□□□□□ -1.14
COLCA1-205ENST00000620864 CCDC93Q567U6 631 aa7.96□□□□□ -1.14
COLCA1-205ENST00000620864 CCDC51Q96ER9 411 aa7.96□□□□□ -1.14
COLCA1-205ENST00000620864 DTNBP1Q96EV8 351 aa7.96□□□□□ -1.14
COLCA1-205ENST00000620864 CDC5LQ99459 802 aaKnown RBP7.96□□□□□ -1.14
COLCA1-205ENST00000620864 RNF216Q9NWF9 866 aaPredicted RBP7.96□□□□□ -1.14
COLCA1-205ENST00000620864 SCOCQ9UIL1 159 aa7.96□□□□□ -1.14
COLCA1-205ENST00000620864 RIPOR2Q9Y4F9 1068 aa7.96□□□□□ -1.14
COLCA1-205ENST00000620864 SPECC1L-ADORA2AF8WAN1 911 aa7.96□□□□□ -1.14
COLCA1-205ENST00000620864 FAM13AO94988 1023 aa7.96□□□□□ -1.14
COLCA1-205ENST00000620864 RAB3GAP1Q15042 981 aa7.96□□□□□ -1.14
COLCA1-205ENST00000620864 LIN9Q5TKA1 542 aa7.96□□□□□ -1.14
COLCA1-205ENST00000620864 MFSD6Q6ZSS7 791 aa7.96□□□□□ -1.14
COLCA1-205ENST00000620864 MCM10Q7L590 875 aa7.96□□□□□ -1.14
COLCA1-205ENST00000620864 NBPF3Q9H094 633 aa7.96□□□□□ -1.14
COLCA1-205ENST00000620864 MFSD1Q9H3U5 465 aa7.96□□□□□ -1.14
COLCA1-205ENST00000620864 ECHDC1Q9NTX5 307 aa7.96□□□□□ -1.14
COLCA1-205ENST00000620864 RTL9Q8NET4 1388 aa7.96□□□□□ -1.14
COLCA1-205ENST00000620864 CHMP2AO43633 222 aa7.96□□□□□ -1.14
COLCA1-205ENST00000620864 MAN1A2O60476 641 aa7.96□□□□□ -1.14
COLCA1-205ENST00000620864 NMIQ13287 307 aaPredicted RBP7.96□□□□□ -1.14
COLCA1-205ENST00000620864 USP48Q86UV5 1035 aa7.96□□□□□ -1.14
COLCA1-205ENST00000620864 PAWRQ96IZ0 340 aaKnown RBP7.96□□□□□ -1.14
COLCA1-205ENST00000620864 CAPN7Q9Y6W3 813 aa7.96□□□□□ -1.14
COLCA1-205ENST00000620864 RAPGEF6Q8TEU7 1601 aa7.96□□□□□ -1.14
COLCA1-205ENST00000620864 KIFC3Q9BVG8 833 aa7.96□□□□□ -1.14
COLCA1-205ENST00000620864 ATP10BO94823 1461 aa7.96□□□□□ -1.14
COLCA1-205ENST00000620864 A0A1B0GW55 424 aa7.95□□□□□ -1.14
COLCA1-205ENST00000620864 BAG3O95817 575 aa7.95□□□□□ -1.14
COLCA1-205ENST00000620864 DUX4L2P0CJ85 424 aa7.95□□□□□ -1.14
COLCA1-205ENST00000620864 DUX4L3P0CJ86 424 aa7.95□□□□□ -1.14
COLCA1-205ENST00000620864 DUX4L4P0CJ87 422 aa7.95□□□□□ -1.14
COLCA1-205ENST00000620864 DUX4L5P0CJ88 424 aa7.95□□□□□ -1.14
COLCA1-205ENST00000620864 DUX4L6P0CJ89 424 aa7.95□□□□□ -1.14
COLCA1-205ENST00000620864 DUX4L7P0CJ90 424 aa7.95□□□□□ -1.14
COLCA1-205ENST00000620864 OAS2P29728 719 aaKnown RBP7.95□□□□□ -1.14
COLCA1-205ENST00000620864 SMC5Q8IY18 1101 aa7.95□□□□□ -1.14
COLCA1-205ENST00000620864 DUX4Q9UBX2 424 aa7.95□□□□□ -1.14
COLCA1-205ENST00000620864 ANGPTL3Q9Y5C1 460 aa7.95□□□□□ -1.14
COLCA1-205ENST00000620864 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.95□□□□□ -1.14
COLCA1-205ENST00000620864 E7EVH7 732 aa7.95□□□□□ -1.14
COLCA1-205ENST00000620864 ZFXP17010 805 aaPredicted RBP7.95□□□□□ -1.14
COLCA1-205ENST00000620864 DIXDC1Q155Q3 683 aa7.95□□□□□ -1.14
COLCA1-205ENST00000620864 ARAP1Q96P48 1450 aa7.95□□□□□ -1.14
COLCA1-205ENST00000620864 SEPT2Q15019 361 aa7.95□□□□□ -1.14
COLCA1-205ENST00000620864 TBC1D9Q6ZT07 1266 aa7.95□□□□□ -1.14
COLCA1-205ENST00000620864 NLRP3Q96P20 1036 aa7.95□□□□□ -1.14
COLCA1-205ENST00000620864 NYXQ9GZU5 481 aa7.95□□□□□ -1.14
COLCA1-205ENST00000620864 MMRN2Q9H8L6 949 aa7.95□□□□□ -1.14
COLCA1-205ENST00000620864 KDM6BO15054 1643 aa7.95□□□□□ -1.14
COLCA1-205ENST00000620864 GSTO1P78417 241 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms