RNA–Protein interactions for RNA: ENST00000620770.1

MUC1-229, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-229ENST00000620770 CASC1Q6TDU7 716 aa16.16■□□□□ 0.18
MUC1-229ENST00000620770 ATP8A2Q9NTI2 1148 aa16.16■□□□□ 0.18
MUC1-229ENST00000620770 FOCADQ5VW36 1801 aa16.16■□□□□ 0.18
MUC1-229ENST00000620770 RAD50Q92878 1312 aa16.16■□□□□ 0.18
MUC1-229ENST00000620770 GSG1L2A8MUP6 293 aa16.15■□□□□ 0.18
MUC1-229ENST00000620770 NPM3O75607 178 aaKnown RBP16.15■□□□□ 0.18
MUC1-229ENST00000620770 POLR3DP05423 398 aaPredicted RBP16.15■□□□□ 0.18
MUC1-229ENST00000620770 SLURP2P0DP57 97 aa16.15■□□□□ 0.18
MUC1-229ENST00000620770 CYP2D6P10635 497 aa16.15■□□□□ 0.18
MUC1-229ENST00000620770 MFAP1P55081 439 aaKnown RBP16.15■□□□□ 0.18
MUC1-229ENST00000620770 SUPT20HL1Q3ZLR7 823 aa16.15■□□□□ 0.18
MUC1-229ENST00000620770 MIGA2Q7L4E1 593 aa16.15■□□□□ 0.18
MUC1-229ENST00000620770 EPB41L4AQ9HCS5 686 aaPredicted RBP16.15■□□□□ 0.18
MUC1-229ENST00000620770 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.15■□□□□ 0.18
MUC1-229ENST00000620770 ATRNL1Q5VV63 1379 aa16.14■□□□□ 0.17
MUC1-229ENST00000620770 CYP2D7A0A087X1C5 515 aa16.14■□□□□ 0.17
MUC1-229ENST00000620770 FAM196BA6NMK8 535 aa16.14■□□□□ 0.17
MUC1-229ENST00000620770 PATL2C9JE40 543 aaKnown RBP16.14■□□□□ 0.17
MUC1-229ENST00000620770 HLA-DOAP06340 250 aa16.14■□□□□ 0.17
MUC1-229ENST00000620770 EVX2Q03828 476 aa16.14■□□□□ 0.17
MUC1-229ENST00000620770 MOB2Q70IA6 237 aa16.14■□□□□ 0.17
MUC1-229ENST00000620770 AMOTL1Q8IY63 956 aa16.14■□□□□ 0.17
MUC1-229ENST00000620770 ZIC5Q96T25 663 aa16.14■□□□□ 0.17
MUC1-229ENST00000620770 ESYT1Q9BSJ8 1104 aa16.14■□□□□ 0.17
MUC1-229ENST00000620770 TRIM34Q9BYJ4 488 aa16.14■□□□□ 0.17
MUC1-229ENST00000620770 NACAP1Q9BZK3 213 aa16.14■□□□□ 0.17
MUC1-229ENST00000620770 NAPBQ9H115 298 aa16.14■□□□□ 0.17
MUC1-229ENST00000620770 COL2A1P02458 1487 aaPredicted RBP16.14■□□□□ 0.17
MUC1-229ENST00000620770 DDX60LQ5H9U9 1706 aaKnown RBP16.14■□□□□ 0.17
MUC1-229ENST00000620770 USP17L12C9JPN9 530 aa16.13■□□□□ 0.17
MUC1-229ENST00000620770 USP17L21D6R901 530 aa16.13■□□□□ 0.17
MUC1-229ENST00000620770 FOXP2O15409 715 aa16.13■□□□□ 0.17
MUC1-229ENST00000620770 SGSM2O43147 1006 aa16.13■□□□□ 0.17
MUC1-229ENST00000620770 KIF23Q02241 960 aaPredicted RBP16.13■□□□□ 0.17
MUC1-229ENST00000620770 RASAL3Q86YV0 1011 aa16.13■□□□□ 0.17
MUC1-229ENST00000620770 IFNL3Q8IZI9 196 aa16.13■□□□□ 0.17
MUC1-229ENST00000620770 STK11IPQ8N1F8 1099 aa16.13■□□□□ 0.17
MUC1-229ENST00000620770 CRACR2BQ8N4Y2 399 aaPredicted RBP16.13■□□□□ 0.17
MUC1-229ENST00000620770 MYH1P12882 1939 aa16.12■□□□□ 0.17
MUC1-229ENST00000620770 MINDY4BA8MYZ0 360 aa16.12■□□□□ 0.17
MUC1-229ENST00000620770 HSPD1P10809 573 aaKnown RBP16.12■□□□□ 0.17
MUC1-229ENST00000620770 DCAF15Q66K64 600 aa16.12■□□□□ 0.17
MUC1-229ENST00000620770 CTR9Q6PD62 1173 aa16.12■□□□□ 0.17
MUC1-229ENST00000620770 HOOK2Q96ED9 719 aa16.12■□□□□ 0.17
MUC1-229ENST00000620770 DHX36Q9H2U1 1008 aaKnown RBP16.12■□□□□ 0.17
MUC1-229ENST00000620770 SAGE1Q9NXZ1 904 aa16.12■□□□□ 0.17
MUC1-229ENST00000620770 ANGEL1Q9UNK9 670 aaKnown RBP16.12■□□□□ 0.17
MUC1-229ENST00000620770 BAZ2AQ9UIF9 1905 aaKnown RBP16.11■□□□□ 0.17
MUC1-229ENST00000620770 SMIM22K7EJ46 135 aa16.11■□□□□ 0.17
MUC1-229ENST00000620770 PPP1R12BO60237 982 aaPredicted RBP16.11■□□□□ 0.17
MUC1-229ENST00000620770 PLCD1P51178 756 aa16.11■□□□□ 0.17
MUC1-229ENST00000620770 GIMAP6Q6P9H5 292 aa16.11■□□□□ 0.17
MUC1-229ENST00000620770 KIAA1211Q6ZU35 1233 aa16.11■□□□□ 0.17
MUC1-229ENST00000620770 TTC6Q86TZ1 520 aa16.11■□□□□ 0.17
MUC1-229ENST00000620770 REM2Q8IYK8 340 aaPredicted RBP16.11■□□□□ 0.17
MUC1-229ENST00000620770 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.11■□□□□ 0.17
MUC1-229ENST00000620770 ANO2Q9NQ90 1003 aa16.11■□□□□ 0.17
MUC1-229ENST00000620770 PI4KBQ9UBF8 816 aa16.11■□□□□ 0.17
MUC1-229ENST00000620770 ARPP21Q9UBL0 812 aaPredicted RBP16.11■□□□□ 0.17
MUC1-229ENST00000620770 UBE2Q2LH0YL09 131 aa16.1■□□□□ 0.17
MUC1-229ENST00000620770 PTH1RQ03431 593 aa16.1■□□□□ 0.17
MUC1-229ENST00000620770 ARMC9Q7Z3E5 817 aa16.1■□□□□ 0.17
MUC1-229ENST00000620770 DYNLL2Q96FJ2 89 aa16.1■□□□□ 0.17
MUC1-229ENST00000620770 ABHD8Q96I13 439 aa16.1■□□□□ 0.17
MUC1-229ENST00000620770 ZNF341Q9BYN7 854 aa16.1■□□□□ 0.17
MUC1-229ENST00000620770 LAMB1P07942 1786 aa16.1■□□□□ 0.17
MUC1-229ENST00000620770 SIPA1L1O43166 1804 aa16.1■□□□□ 0.17
MUC1-229ENST00000620770 IREB2P48200 963 aaKnown RBP16.09■□□□□ 0.17
MUC1-229ENST00000620770 HAND2P61296 217 aa16.09■□□□□ 0.17
MUC1-229ENST00000620770 C12orf60Q5U649 245 aa16.09■□□□□ 0.17
MUC1-229ENST00000620770 WRNIP1Q96S55 665 aa16.09■□□□□ 0.17
MUC1-229ENST00000620770 SERPINB13Q9UIV8 391 aa16.09■□□□□ 0.17
MUC1-229ENST00000620770 USP2O75604 605 aaPredicted RBP16.08■□□□□ 0.16
MUC1-229ENST00000620770 FGAP02671 866 aa16.08■□□□□ 0.16
MUC1-229ENST00000620770 PPARAQ07869 468 aa16.08■□□□□ 0.16
MUC1-229ENST00000620770 SLC44A5Q8NCS7 719 aa16.08■□□□□ 0.16
MUC1-229ENST00000620770 DSCC1Q9BVC3 393 aa16.08■□□□□ 0.16
MUC1-229ENST00000620770 DNAJC18Q9H819 358 aa16.08■□□□□ 0.16
MUC1-229ENST00000620770 HERC5Q9UII4 1024 aaKnown RBP16.08■□□□□ 0.16
MUC1-229ENST00000620770 TRPA1O75762 1119 aa16.07■□□□□ 0.16
MUC1-229ENST00000620770 INPP5BP32019 993 aa16.07■□□□□ 0.16
MUC1-229ENST00000620770 CTDSPL2Q05D32 466 aa16.07■□□□□ 0.16
MUC1-229ENST00000620770 ALX1Q15699 326 aa16.07■□□□□ 0.16
MUC1-229ENST00000620770 SBK1Q52WX2 424 aa16.07■□□□□ 0.16
MUC1-229ENST00000620770 FOXP4Q8IVH2 680 aaPredicted RBP16.07■□□□□ 0.16
MUC1-229ENST00000620770 EHD4Q9H223 541 aa16.07■□□□□ 0.16
MUC1-229ENST00000620770 RNF186Q9NXI6 227 aa16.07■□□□□ 0.16
MUC1-229ENST00000620770 OTOFQ9HC10 1997 aa16.07■□□□□ 0.16
MUC1-229ENST00000620770 GDF11O95390 407 aa16.06■□□□□ 0.16
MUC1-229ENST00000620770 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.06■□□□□ 0.16
MUC1-229ENST00000620770 ZKSCAN4Q969J2 545 aaPredicted RBP16.06■□□□□ 0.16
MUC1-229ENST00000620770 CLMNQ96JQ2 1002 aa16.06■□□□□ 0.16
MUC1-229ENST00000620770 LSG1Q9H089 658 aaKnown RBP16.06■□□□□ 0.16
MUC1-229ENST00000620770 RBM8AQ9Y5S9 174 aaKnown RBP16.06■□□□□ 0.16
MUC1-229ENST00000620770 ZMYM6O95789 1325 aa16.05■□□□□ 0.16
MUC1-229ENST00000620770 TBC1D12O60347 775 aa16.05■□□□□ 0.16
MUC1-229ENST00000620770 PRDM1O75626 825 aa16.05■□□□□ 0.16
MUC1-229ENST00000620770 SLC3A2P08195 630 aaKnown RBP16.05■□□□□ 0.16
MUC1-229ENST00000620770 SHMT1P34896 483 aa16.05■□□□□ 0.16
MUC1-229ENST00000620770 MAP3K9P80192 1104 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms