RNA–Protein interactions for RNA: ENST00000620529.1

PCGF3-213, Transcript of polycomb group ring finger 3, humanhuman

BASIC

Gene PCGF3, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-213ENST00000620529 HDAC9Q9UKV0 1011 aa19.45■□□□□ 0.7
PCGF3-213ENST00000620529 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.45■□□□□ 0.7
PCGF3-213ENST00000620529 LTBP3Q9NS15 1303 aa19.45■□□□□ 0.7
PCGF3-213ENST00000620529 CCDC69A6NI79 296 aa19.44■□□□□ 0.7
PCGF3-213ENST00000620529 CCT2P78371 535 aaKnown RBP19.44■□□□□ 0.7
PCGF3-213ENST00000620529 NFKBIBQ15653 356 aa19.44■□□□□ 0.7
PCGF3-213ENST00000620529 APOBEC3HQ6NTF7 200 aaKnown RBP19.44■□□□□ 0.7
PCGF3-213ENST00000620529 CDC42EP5Q6NZY7 148 aa19.44■□□□□ 0.7
PCGF3-213ENST00000620529 TMTC2Q8N394 836 aa19.44■□□□□ 0.7
PCGF3-213ENST00000620529 LLPHQ9BRT6 129 aaKnown RBP19.44■□□□□ 0.7
PCGF3-213ENST00000620529 LY9Q9HBG7 655 aa19.44■□□□□ 0.7
PCGF3-213ENST00000620529 BRPF3Q9ULD4 1205 aa19.44■□□□□ 0.7
PCGF3-213ENST00000620529 DHX16O60231 1041 aaKnown RBP19.43■□□□□ 0.7
PCGF3-213ENST00000620529 NBR1Q14596 966 aa19.43■□□□□ 0.7
PCGF3-213ENST00000620529 SYNE3Q6ZMZ3 975 aa19.43■□□□□ 0.7
PCGF3-213ENST00000620529 SGMS1Q86VZ5 419 aa19.43■□□□□ 0.7
PCGF3-213ENST00000620529 TNPO1Q92973 898 aaKnown RBP19.43■□□□□ 0.7
PCGF3-213ENST00000620529 ZKSCAN3Q9BRR0 538 aa19.43■□□□□ 0.7
PCGF3-213ENST00000620529 MYH8P13535 1937 aa19.43■□□□□ 0.7
PCGF3-213ENST00000620529 EVX2Q03828 476 aa19.43■□□□□ 0.7
PCGF3-213ENST00000620529 PKP1Q13835 747 aa19.43■□□□□ 0.7
PCGF3-213ENST00000620529 MKNK2Q9HBH9 465 aa19.43■□□□□ 0.7
PCGF3-213ENST00000620529 TSPY2A6NKD2 308 aa19.42■□□□□ 0.7
PCGF3-213ENST00000620529 WDHD1O75717 1129 aaPredicted RBP19.42■□□□□ 0.7
PCGF3-213ENST00000620529 TNKSO95271 1327 aa19.42■□□□□ 0.7
PCGF3-213ENST00000620529 TTC6Q86TZ1 520 aa19.42■□□□□ 0.7
PCGF3-213ENST00000620529 OGFOD1Q8N543 542 aa19.42■□□□□ 0.7
PCGF3-213ENST00000620529 GBP4Q96PP9 640 aa19.42■□□□□ 0.7
PCGF3-213ENST00000620529 SLC12A7Q9Y666 1083 aa19.42■□□□□ 0.7
PCGF3-213ENST00000620529 WDR33Q9C0J8 1336 aaKnown RBP19.41■□□□□ 0.7
PCGF3-213ENST00000620529 PDIA4P13667 645 aaKnown RBP19.41■□□□□ 0.7
PCGF3-213ENST00000620529 PDCP20941 246 aa19.41■□□□□ 0.7
PCGF3-213ENST00000620529 PLCD1P51178 756 aa19.41■□□□□ 0.7
PCGF3-213ENST00000620529 CFAP100Q494V2 611 aa19.41■□□□□ 0.7
PCGF3-213ENST00000620529 CIAPIN1Q6FI81 312 aa19.41■□□□□ 0.7
PCGF3-213ENST00000620529 APOA5Q6Q788 366 aa19.41■□□□□ 0.7
PCGF3-213ENST00000620529 ILDR2Q71H61 639 aa19.41■□□□□ 0.7
PCGF3-213ENST00000620529 AGBL3Q8NEM8 1001 aa19.41■□□□□ 0.7
PCGF3-213ENST00000620529 GOLGB1Q14789 3259 aaKnown RBP19.41■□□□□ 0.7
PCGF3-213ENST00000620529 ZBTB43O43298 467 aa19.41■□□□□ 0.7
PCGF3-213ENST00000620529 METAP2P50579 478 aaKnown RBP eCLIP19.41■□□□□ 0.7
PCGF3-213ENST00000620529 HMGN5P82970 282 aaKnown RBP19.41■□□□□ 0.7
PCGF3-213ENST00000620529 ZNF444Q8N0Y2 327 aaPredicted RBP19.41■□□□□ 0.7
PCGF3-213ENST00000620529 DYNLL2Q96FJ2 89 aa19.41■□□□□ 0.7
PCGF3-213ENST00000620529 ZSCAN10Q96SZ4 725 aaPredicted RBP19.41■□□□□ 0.7
PCGF3-213ENST00000620529 FHDC1Q9C0D6 1143 aaPredicted RBP19.41■□□□□ 0.7
PCGF3-213ENST00000620529 NCOA5Q9HCD5 579 aaKnown RBP19.41■□□□□ 0.7
PCGF3-213ENST00000620529 KIF3AQ9Y496 699 aa19.41■□□□□ 0.7
PCGF3-213ENST00000620529 CPLX1O14810 134 aa19.4■□□□□ 0.7
PCGF3-213ENST00000620529 RASSF7Q02833 373 aa19.4■□□□□ 0.7
PCGF3-213ENST00000620529 TNIP1Q15025 636 aa19.4■□□□□ 0.7
PCGF3-213ENST00000620529 FAM184AQ8NB25 1140 aa19.4■□□□□ 0.7
PCGF3-213ENST00000620529 OSBPL5Q9H0X9 879 aaPredicted RBP19.4■□□□□ 0.7
PCGF3-213ENST00000620529 DDX4Q9NQI0 724 aaKnown RBP19.4■□□□□ 0.7
PCGF3-213ENST00000620529 STX6O43752 255 aa19.39■□□□□ 0.7
PCGF3-213ENST00000620529 BRD1O95696 1058 aa19.39■□□□□ 0.7
PCGF3-213ENST00000620529 HLA-DOAP06340 250 aa19.39■□□□□ 0.7
PCGF3-213ENST00000620529 SYT1P21579 422 aa19.39■□□□□ 0.7
PCGF3-213ENST00000620529 CXCL9Q07325 125 aa19.39■□□□□ 0.7
PCGF3-213ENST00000620529 IFIT1BQ5T764 474 aaKnown RBP19.39■□□□□ 0.7
PCGF3-213ENST00000620529 C16orf86Q6ZW13 317 aa19.39■□□□□ 0.7
PCGF3-213ENST00000620529 MICU3Q86XE3 530 aa19.39■□□□□ 0.7
PCGF3-213ENST00000620529 GMLQ99445 158 aa19.39■□□□□ 0.7
PCGF3-213ENST00000620529 SENP2Q9HC62 589 aa19.39■□□□□ 0.7
PCGF3-213ENST00000620529 HPS5Q9UPZ3 1129 aa19.39■□□□□ 0.7
PCGF3-213ENST00000620529 ZBTB12Q9Y330 459 aaPredicted RBP19.39■□□□□ 0.7
PCGF3-213ENST00000620529 JAK2O60674 1132 aa19.39■□□□□ 0.69
PCGF3-213ENST00000620529 FAM47AQ5JRC9 791 aa19.39■□□□□ 0.69
PCGF3-213ENST00000620529 LARP1BQ659C4 914 aaKnown RBP19.39■□□□□ 0.69
PCGF3-213ENST00000620529 CPLX2Q6PUV4 134 aaKnown RBP19.39■□□□□ 0.69
PCGF3-213ENST00000620529 RAB11FIP4Q86YS3 637 aa19.39■□□□□ 0.69
PCGF3-213ENST00000620529 NSUN7Q8NE18 718 aaKnown RBP19.39■□□□□ 0.69
PCGF3-213ENST00000620529 SMARCC2Q8TAQ2 1214 aa19.39■□□□□ 0.69
PCGF3-213ENST00000620529 PCDHAC2Q9Y5I4 1007 aa19.39■□□□□ 0.69
PCGF3-213ENST00000620529 PTPDC1A2A3K4 754 aa19.38■□□□□ 0.69
PCGF3-213ENST00000620529 GOLGA8AA7E2F4 631 aa19.38■□□□□ 0.69
PCGF3-213ENST00000620529 DTNBO60941 627 aa19.38■□□□□ 0.69
PCGF3-213ENST00000620529 SEC23AQ15436 765 aa19.38■□□□□ 0.69
PCGF3-213ENST00000620529 FOXD4L5Q5VV16 416 aaPredicted RBP19.38■□□□□ 0.69
PCGF3-213ENST00000620529 FOXD4L4Q8WXT5 416 aaPredicted RBP19.38■□□□□ 0.69
PCGF3-213ENST00000620529 IDI2Q9BXS1 227 aa19.38■□□□□ 0.69
PCGF3-213ENST00000620529 TMOD2Q9NZR1 351 aa19.38■□□□□ 0.69
PCGF3-213ENST00000620529 ZDHHC9Q9Y397 364 aa19.38■□□□□ 0.69
PCGF3-213ENST00000620529 TSPY3P0CV98 308 aa19.37■□□□□ 0.69
PCGF3-213ENST00000620529 TSPY8P0CW00 308 aa19.37■□□□□ 0.69
PCGF3-213ENST00000620529 CDK8P49336 464 aa19.37■□□□□ 0.69
PCGF3-213ENST00000620529 TFAP4Q01664 338 aa19.37■□□□□ 0.69
PCGF3-213ENST00000620529 DLGAP5Q15398 846 aa19.37■□□□□ 0.69
PCGF3-213ENST00000620529 CCDC178Q5BJE1 867 aa19.37■□□□□ 0.69
PCGF3-213ENST00000620529 ENAHQ8N8S7 591 aaPredicted RBP19.37■□□□□ 0.69
PCGF3-213ENST00000620529 DDX11Q96FC9 970 aa19.37■□□□□ 0.69
PCGF3-213ENST00000620529 TDRD3Q9H7E2 651 aaKnown RBP19.37■□□□□ 0.69
PCGF3-213ENST00000620529 CDKL5O76039 1030 aa19.37■□□□□ 0.69
PCGF3-213ENST00000620529 RCAN1P53805 252 aa19.37■□□□□ 0.69
PCGF3-213ENST00000620529 EIF6P56537 245 aaKnown RBP19.37■□□□□ 0.69
PCGF3-213ENST00000620529 NFIAQ12857 509 aa19.37■□□□□ 0.69
PCGF3-213ENST00000620529 SLC44A5Q8NCS7 719 aa19.37■□□□□ 0.69
PCGF3-213ENST00000620529 VPS37CA5D8V6 355 aaPredicted RBP19.36■□□□□ 0.69
PCGF3-213ENST00000620529 NPM3O75607 178 aaKnown RBP19.36■□□□□ 0.69
PCGF3-213ENST00000620529 CTDNEP1O95476 244 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms