RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 IFI16Q16666 785 aaKnown RBP9.4□□□□□ -0.9
ALMS1-208ENST00000620466 LRRC24Q50LG9 513 aa9.4□□□□□ -0.9
ALMS1-208ENST00000620466 NBPF11Q86T75 865 aa9.4□□□□□ -0.9
ALMS1-208ENST00000620466 CCDC42Q96M95 316 aa9.4□□□□□ -0.9
ALMS1-208ENST00000620466 KIF2CQ99661 725 aa9.4□□□□□ -0.9
ALMS1-208ENST00000620466 JAG2Q9Y219 1238 aa9.4□□□□□ -0.9
ALMS1-208ENST00000620466 V9GY48 417 aaPredicted RBP9.4□□□□□ -0.9
ALMS1-208ENST00000620466 CAMSAP1Q5T5Y3 1602 aa9.4□□□□□ -0.91
ALMS1-208ENST00000620466 PDIA3P30101 505 aaKnown RBP9.4□□□□□ -0.91
ALMS1-208ENST00000620466 TDRD7Q8NHU6 1098 aaKnown RBP9.4□□□□□ -0.91
ALMS1-208ENST00000620466 SYNCQ9H7C4 482 aa9.4□□□□□ -0.91
ALMS1-208ENST00000620466 SERTAD1Q9UHV2 236 aa9.4□□□□□ -0.91
ALMS1-208ENST00000620466 ZMYM6O95789 1325 aa9.4□□□□□ -0.91
ALMS1-208ENST00000620466 PLS1Q14651 629 aa9.39□□□□□ -0.91
ALMS1-208ENST00000620466 CCDC122Q5T0U0 273 aa9.39□□□□□ -0.91
ALMS1-208ENST00000620466 CCDC174Q6PII3 467 aa9.39□□□□□ -0.91
ALMS1-208ENST00000620466 M0R2C6 588 aa9.39□□□□□ -0.91
ALMS1-208ENST00000620466 PHACTR2O75167 634 aa9.39□□□□□ -0.91
ALMS1-208ENST00000620466 GABPB1Q06547 395 aaPredicted RBP9.39□□□□□ -0.91
ALMS1-208ENST00000620466 ZNF804AQ7Z570 1209 aa9.39□□□□□ -0.91
ALMS1-208ENST00000620466 MRFAP1L1Q96HT8 127 aa9.39□□□□□ -0.91
ALMS1-208ENST00000620466 DBNLQ9UJU6 430 aaKnown RBP9.39□□□□□ -0.91
ALMS1-208ENST00000620466 TTF2Q9UNY4 1162 aaKnown RBP9.39□□□□□ -0.91
ALMS1-208ENST00000620466 NFE2L3Q9Y4A8 694 aa9.39□□□□□ -0.91
ALMS1-208ENST00000620466 ARHGAP6O43182 974 aa9.39□□□□□ -0.91
ALMS1-208ENST00000620466 OPA1O60313 960 aa9.39□□□□□ -0.91
ALMS1-208ENST00000620466 TRIM14Q14142 442 aa9.39□□□□□ -0.91
ALMS1-208ENST00000620466 NLRP3Q96P20 1036 aa9.39□□□□□ -0.91
ALMS1-208ENST00000620466 TSGA10Q9BZW7 698 aa9.39□□□□□ -0.91
ALMS1-208ENST00000620466 DENND2AQ9ULE3 1009 aa9.39□□□□□ -0.91
ALMS1-208ENST00000620466 SSX2IPQ9Y2D8 614 aa9.39□□□□□ -0.91
ALMS1-208ENST00000620466 TTC38Q5R3I4 469 aa9.39□□□□□ -0.91
ALMS1-208ENST00000620466 LPIN2Q92539 896 aa9.39□□□□□ -0.91
ALMS1-208ENST00000620466 KRBA2Q6ZNG9 492 aa9.39□□□□□ -0.91
ALMS1-208ENST00000620466 C11orf57Q6ZUT1 292 aaPredicted RBP9.39□□□□□ -0.91
ALMS1-208ENST00000620466 ARID5AQ03989 594 aa9.38□□□□□ -0.91
ALMS1-208ENST00000620466 PAK1Q13153 545 aa9.38□□□□□ -0.91
ALMS1-208ENST00000620466 SMC1AQ14683 1233 aaKnown RBP9.38□□□□□ -0.91
ALMS1-208ENST00000620466 TTLL7Q6ZT98 887 aa9.38□□□□□ -0.91
ALMS1-208ENST00000620466 NEK11Q8NG66 645 aa9.38□□□□□ -0.91
ALMS1-208ENST00000620466 MAPK8IP1Q9UQF2 711 aa9.38□□□□□ -0.91
ALMS1-208ENST00000620466 PNPLA6Q8IY17 1366 aa9.38□□□□□ -0.91
ALMS1-208ENST00000620466 FERP16591 822 aa9.38□□□□□ -0.91
ALMS1-208ENST00000620466 ADKP55263 362 aaKnown RBP9.38□□□□□ -0.91
ALMS1-208ENST00000620466 GIMAP7Q8NHV1 300 aa9.38□□□□□ -0.91
ALMS1-208ENST00000620466 ERMNQ8TAM6 284 aa9.38□□□□□ -0.91
ALMS1-208ENST00000620466 LONRF3Q496Y0 759 aa9.38□□□□□ -0.91
ALMS1-208ENST00000620466 MROH5Q6ZUA9 1318 aa9.38□□□□□ -0.91
ALMS1-208ENST00000620466 TSPOAP1O95153 1857 aa9.38□□□□□ -0.91
ALMS1-208ENST00000620466 LRRC45Q96CN5 670 aa9.38□□□□□ -0.91
ALMS1-208ENST00000620466 C8orf37Q96NL8 207 aa9.38□□□□□ -0.91
ALMS1-208ENST00000620466 NYXQ9GZU5 481 aa9.38□□□□□ -0.91
ALMS1-208ENST00000620466 COPRSQ9NQ92 184 aa9.38□□□□□ -0.91
ALMS1-208ENST00000620466 KIAA1210Q9ULL0 1709 aa9.38□□□□□ -0.91
ALMS1-208ENST00000620466 ARHGAP31Q2M1Z3 1444 aa9.38□□□□□ -0.91
ALMS1-208ENST00000620466 CARMIL3Q8ND23 1372 aa9.38□□□□□ -0.91
ALMS1-208ENST00000620466 CYP21A2P08686 494 aa9.38□□□□□ -0.91
ALMS1-208ENST00000620466 ZNF526Q8TF50 670 aaPredicted RBP9.38□□□□□ -0.91
ALMS1-208ENST00000620466 SPAG5Q96R06 1193 aa9.38□□□□□ -0.91
ALMS1-208ENST00000620466 NOC4LQ9BVI4 516 aaKnown RBP9.38□□□□□ -0.91
ALMS1-208ENST00000620466 BLZF1Q9H2G9 400 aa9.38□□□□□ -0.91
ALMS1-208ENST00000620466 TAB2Q9NYJ8 693 aa9.38□□□□□ -0.91
ALMS1-208ENST00000620466 ZC3H13Q5T200 1668 aaKnown RBP9.37□□□□□ -0.91
ALMS1-208ENST00000620466 PRDM1O75626 825 aa9.37□□□□□ -0.91
ALMS1-208ENST00000620466 NSUN7Q8NE18 718 aaKnown RBP9.37□□□□□ -0.91
ALMS1-208ENST00000620466 ECM2O94769 699 aaPredicted RBP9.37□□□□□ -0.91
ALMS1-208ENST00000620466 CMA1P23946 247 aa9.37□□□□□ -0.91
ALMS1-208ENST00000620466 KRT79Q5XKE5 535 aa9.37□□□□□ -0.91
ALMS1-208ENST00000620466 CMTR1Q8N1G2 835 aaKnown RBP9.37□□□□□ -0.91
ALMS1-208ENST00000620466 SELENOOQ9BVL4 669 aa9.37□□□□□ -0.91
ALMS1-208ENST00000620466 SAP30BPQ9UHR5 308 aaKnown RBP9.37□□□□□ -0.91
ALMS1-208ENST00000620466 TUBB2AQ13885 445 aa9.37□□□□□ -0.91
ALMS1-208ENST00000620466 DDB1Q16531 1140 aa9.37□□□□□ -0.91
ALMS1-208ENST00000620466 TUBB2BQ9BVA1 445 aa9.37□□□□□ -0.91
ALMS1-208ENST00000620466 LMTK2Q8IWU2 1503 aa9.37□□□□□ -0.91
ALMS1-208ENST00000620466 hCG_1642624A0A1W2PR95 340 aa9.37□□□□□ -0.91
ALMS1-208ENST00000620466 MAP3K9P80192 1104 aa9.37□□□□□ -0.91
ALMS1-208ENST00000620466 PDE4DQ08499 809 aa9.37□□□□□ -0.91
ALMS1-208ENST00000620466 NECTIN1Q15223 517 aa9.37□□□□□ -0.91
ALMS1-208ENST00000620466 LETM2Q2VYF4 491 aa9.37□□□□□ -0.91
ALMS1-208ENST00000620466 SPECC1LQ69YQ0 1117 aa9.37□□□□□ -0.91
ALMS1-208ENST00000620466 RGS22Q8NE09 1264 aa9.37□□□□□ -0.91
ALMS1-208ENST00000620466 NELFBQ8WX92 580 aa9.37□□□□□ -0.91
ALMS1-208ENST00000620466 JAKMIP2Q96AA8 810 aa9.37□□□□□ -0.91
ALMS1-208ENST00000620466 CLIC6Q96NY7 704 aa9.37□□□□□ -0.91
ALMS1-208ENST00000620466 FTOQ9C0B1 505 aaKnown RBP eCLIP9.37□□□□□ -0.91
ALMS1-208ENST00000620466 ANKRD2Q9GZV1 360 aa9.37□□□□□ -0.91
ALMS1-208ENST00000620466 TNNI2P48788 182 aa9.37□□□□□ -0.91
ALMS1-208ENST00000620466 PLCD1P51178 756 aa9.37□□□□□ -0.91
ALMS1-208ENST00000620466 CTSWP56202 376 aa9.37□□□□□ -0.91
ALMS1-208ENST00000620466 TCIRG1Q13488 830 aa9.37□□□□□ -0.91
ALMS1-208ENST00000620466 ZMYM1Q5SVZ6 1142 aa9.37□□□□□ -0.91
ALMS1-208ENST00000620466 PPM1EQ8WY54 764 aa9.37□□□□□ -0.91
ALMS1-208ENST00000620466 RTEL1Q9NZ71 1219 aa9.37□□□□□ -0.91
ALMS1-208ENST00000620466 VPS54Q9P1Q0 977 aa9.37□□□□□ -0.91
ALMS1-208ENST00000620466 CDC42BPGQ6DT37 1551 aa9.37□□□□□ -0.91
ALMS1-208ENST00000620466 FGAP02671 866 aa9.36□□□□□ -0.91
ALMS1-208ENST00000620466 LDHBP07195 334 aaKnown RBP9.36□□□□□ -0.91
ALMS1-208ENST00000620466 PARP1P09874 1014 aaKnown RBP9.36□□□□□ -0.91
ALMS1-208ENST00000620466 DNAJC10Q8IXB1 793 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms