RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 BEND3Q5T5X7 828 aa11.78□□□□□ -0.52
VPS11-207ENST00000620429 B4GALNT4Q76KP1 1039 aa11.78□□□□□ -0.52
VPS11-207ENST00000620429 MAP4K1Q92918 833 aa11.78□□□□□ -0.52
VPS11-207ENST00000620429 BPIFA3Q9BQP9 254 aa11.78□□□□□ -0.52
VPS11-207ENST00000620429 PPP2R2CQ9Y2T4 447 aa11.78□□□□□ -0.52
VPS11-207ENST00000620429 RGPD3A6NKT7 1758 aaPredicted RBP11.78□□□□□ -0.52
VPS11-207ENST00000620429 RGPD4Q7Z3J3 1758 aa11.78□□□□□ -0.52
VPS11-207ENST00000620429 LRRIQ3A6PVS8 624 aaPredicted RBP11.77□□□□□ -0.52
VPS11-207ENST00000620429 RASSF9O75901 435 aa11.77□□□□□ -0.52
VPS11-207ENST00000620429 ARHGAP25P42331 645 aa11.77□□□□□ -0.52
VPS11-207ENST00000620429 CEP85LQ5SZL2 805 aa11.77□□□□□ -0.52
VPS11-207ENST00000620429 YTHDF3Q7Z739 585 aaKnown RBP11.77□□□□□ -0.52
VPS11-207ENST00000620429 KIAA1328Q86T90 577 aa11.77□□□□□ -0.52
VPS11-207ENST00000620429 SMARCC1Q92922 1105 aaPredicted RBP11.77□□□□□ -0.52
VPS11-207ENST00000620429 TMX4Q9H1E5 349 aaPredicted RBP11.77□□□□□ -0.52
VPS11-207ENST00000620429 KIF9Q9HAQ2 790 aa11.77□□□□□ -0.52
VPS11-207ENST00000620429 TNS1Q9HBL0 1735 aaKnown RBP11.77□□□□□ -0.52
VPS11-207ENST00000620429 BATF3Q9NR55 127 aa11.77□□□□□ -0.52
VPS11-207ENST00000620429 LMO7Q8WWI1 1683 aa11.77□□□□□ -0.53
VPS11-207ENST00000620429 TUBB2AQ13885 445 aa11.77□□□□□ -0.53
VPS11-207ENST00000620429 AACSQ86V21 672 aa11.77□□□□□ -0.53
VPS11-207ENST00000620429 IGSF22Q8N9C0 903 aa11.77□□□□□ -0.53
VPS11-207ENST00000620429 TCP11Q8WWU5 503 aa11.77□□□□□ -0.53
VPS11-207ENST00000620429 TUBB2BQ9BVA1 445 aa11.77□□□□□ -0.53
VPS11-207ENST00000620429 IFNKQ9P0W0 207 aa11.77□□□□□ -0.53
VPS11-207ENST00000620429 DDX20Q9UHI6 824 aaKnown RBP11.77□□□□□ -0.53
VPS11-207ENST00000620429 PA2G4Q9UQ80 394 aaKnown RBP11.77□□□□□ -0.53
VPS11-207ENST00000620429 KDM3BQ7LBC6 1761 aa11.77□□□□□ -0.53
VPS11-207ENST00000620429 ARHGAP6O43182 974 aa11.76□□□□□ -0.53
VPS11-207ENST00000620429 WDHD1O75717 1129 aaPredicted RBP11.76□□□□□ -0.53
VPS11-207ENST00000620429 CSB-PGBD3P0DP91 1061 aa11.76□□□□□ -0.53
VPS11-207ENST00000620429 CCT2P78371 535 aaKnown RBP11.76□□□□□ -0.53
VPS11-207ENST00000620429 CCDC50Q8IVM0 306 aa11.76□□□□□ -0.53
VPS11-207ENST00000620429 MEFVO15553 781 aaPredicted RBP11.76□□□□□ -0.53
VPS11-207ENST00000620429 EZRP15311 586 aaKnown RBP11.76□□□□□ -0.53
VPS11-207ENST00000620429 RPS6KB1P23443 525 aa11.76□□□□□ -0.53
VPS11-207ENST00000620429 BCAS4Q8TDM0 211 aa11.76□□□□□ -0.53
VPS11-207ENST00000620429 PARD3BQ8TEW8 1205 aa11.76□□□□□ -0.53
VPS11-207ENST00000620429 RAPGEF4Q8WZA2 1011 aa11.76□□□□□ -0.53
VPS11-207ENST00000620429 SAAL1Q96ER3 474 aa11.76□□□□□ -0.53
VPS11-207ENST00000620429 KAT14Q9H8E8 782 aa11.76□□□□□ -0.53
VPS11-207ENST00000620429 HIP1O00291 1037 aa11.75□□□□□ -0.53
VPS11-207ENST00000620429 EIF3HO15372 352 aaKnown RBP eCLIP11.75□□□□□ -0.53
VPS11-207ENST00000620429 KIAA0754O94854 1291 aa11.75□□□□□ -0.53
VPS11-207ENST00000620429 HOXB7P09629 217 aa11.75□□□□□ -0.53
VPS11-207ENST00000620429 BAG6P46379 1132 aa11.75□□□□□ -0.53
VPS11-207ENST00000620429 RAB27AP51159 221 aa11.75□□□□□ -0.53
VPS11-207ENST00000620429 AIMP1Q12904 312 aaKnown RBP11.75□□□□□ -0.53
VPS11-207ENST00000620429 PSMD2Q13200 908 aa11.75□□□□□ -0.53
VPS11-207ENST00000620429 TOB2Q14106 344 aaPredicted RBP11.75□□□□□ -0.53
VPS11-207ENST00000620429 CWF19L2Q2TBE0 894 aaKnown RBP11.75□□□□□ -0.53
VPS11-207ENST00000620429 TRIM74Q86UV6 250 aa11.75□□□□□ -0.53
VPS11-207ENST00000620429 TRIM73Q86UV7 250 aa11.75□□□□□ -0.53
VPS11-207ENST00000620429 PAGR1Q9BTK6 254 aa11.75□□□□□ -0.53
VPS11-207ENST00000620429 MAP3K2Q9Y2U5 619 aa11.75□□□□□ -0.53
VPS11-207ENST00000620429 TAF6LQ9Y6J9 622 aa11.75□□□□□ -0.53
VPS11-207ENST00000620429 MAFGO15525 162 aa11.75□□□□□ -0.53
VPS11-207ENST00000620429 JAK2O60674 1132 aa11.75□□□□□ -0.53
VPS11-207ENST00000620429 PIP4K2AP48426 406 aaPredicted RBP11.75□□□□□ -0.53
VPS11-207ENST00000620429 VSNL1P62760 191 aa11.75□□□□□ -0.53
VPS11-207ENST00000620429 CEBPZQ03701 1054 aaKnown RBP11.75□□□□□ -0.53
VPS11-207ENST00000620429 PPFIA1Q13136 1202 aa11.75□□□□□ -0.53
VPS11-207ENST00000620429 SKIDA1Q1XH10 827 aa11.75□□□□□ -0.53
VPS11-207ENST00000620429 KRT27Q7Z3Y8 459 aa11.75□□□□□ -0.53
VPS11-207ENST00000620429 MEGF6O75095 1541 aa11.75□□□□□ -0.53
VPS11-207ENST00000620429 H3BQV1 296 aa11.74□□□□□ -0.53
VPS11-207ENST00000620429 PPFIA2O75334 1257 aa11.74□□□□□ -0.53
VPS11-207ENST00000620429 IFFO2Q5TF58 517 aa11.74□□□□□ -0.53
VPS11-207ENST00000620429 WDR93Q6P2C0 686 aa11.74□□□□□ -0.53
VPS11-207ENST00000620429 RPUSD2Q8IZ73 545 aaKnown RBP11.74□□□□□ -0.53
VPS11-207ENST00000620429 BRF1Q92994 677 aa11.74□□□□□ -0.53
VPS11-207ENST00000620429 C9orf78Q9NZ63 289 aaPredicted RBP11.74□□□□□ -0.53
VPS11-207ENST00000620429 DBF4Q9UBU7 674 aaPredicted RBP11.74□□□□□ -0.53
VPS11-207ENST00000620429 GRIN2DO15399 1336 aa11.74□□□□□ -0.53
VPS11-207ENST00000620429 A0A0D9SFI3 127 aa11.74□□□□□ -0.53
VPS11-207ENST00000620429 MAGEA8P43361 318 aa11.74□□□□□ -0.53
VPS11-207ENST00000620429 ATP2B2Q01814 1243 aa11.74□□□□□ -0.53
VPS11-207ENST00000620429 SEPT12Q8IYM1 358 aa11.74□□□□□ -0.53
VPS11-207ENST00000620429 FAM76AQ8TAV0 307 aa11.74□□□□□ -0.53
VPS11-207ENST00000620429 FSD1Q9BTV5 496 aa11.74□□□□□ -0.53
VPS11-207ENST00000620429 VCPKMTQ9H867 229 aa11.74□□□□□ -0.53
VPS11-207ENST00000620429 CDC23Q9UJX2 597 aa11.74□□□□□ -0.53
VPS11-207ENST00000620429 RREB1Q92766 1687 aa11.74□□□□□ -0.53
VPS11-207ENST00000620429 KDM6AO15550 1401 aaPredicted RBP11.74□□□□□ -0.53
VPS11-207ENST00000620429 ZC3H4Q9UPT8 1303 aaKnown RBP11.74□□□□□ -0.53
VPS11-207ENST00000620429 PES1O00541 588 aaKnown RBP11.73□□□□□ -0.53
VPS11-207ENST00000620429 NAA25Q14CX7 972 aa11.73□□□□□ -0.53
VPS11-207ENST00000620429 FILIP1LQ4L180 1135 aa11.73□□□□□ -0.53
VPS11-207ENST00000620429 TTLL7Q6ZT98 887 aa11.73□□□□□ -0.53
VPS11-207ENST00000620429 TMEM139Q8IV31 216 aa11.73□□□□□ -0.53
VPS11-207ENST00000620429 FAM177A1Q8N128 213 aaPredicted RBP11.73□□□□□ -0.53
VPS11-207ENST00000620429 OR8K1Q8NGG5 319 aa11.73□□□□□ -0.53
VPS11-207ENST00000620429 CCDC8Q9H0W5 538 aaPredicted RBP11.73□□□□□ -0.53
VPS11-207ENST00000620429 MYO6Q9UM54 1294 aa11.73□□□□□ -0.53
VPS11-207ENST00000620429 HEG1Q9ULI3 1381 aa11.73□□□□□ -0.53
VPS11-207ENST00000620429 A6NNZ2 444 aa11.73□□□□□ -0.53
VPS11-207ENST00000620429 PHKG2P15735 406 aa11.73□□□□□ -0.53
VPS11-207ENST00000620429 TATP17735 454 aaPredicted RBP11.73□□□□□ -0.53
VPS11-207ENST00000620429 RESTQ13127 1097 aa11.73□□□□□ -0.53
VPS11-207ENST00000620429 MTX1Q13505 466 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 144.8 ms