RNA–Protein interactions for RNA: ENST00000619485.4

TP53-225, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,506 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-225ENST00000619485 STK25O00506 426 aa11.9□□□□□ -0.5
TP53-225ENST00000619485 POLR3GO15318 223 aaPredicted RBP11.9□□□□□ -0.5
TP53-225ENST00000619485 GPAA1O43292 621 aa11.9□□□□□ -0.5
TP53-225ENST00000619485 CMA1P23946 247 aa11.9□□□□□ -0.5
TP53-225ENST00000619485 METAP2P50579 478 aaKnown RBP eCLIP11.9□□□□□ -0.5
TP53-225ENST00000619485 TBC1D9BQ66K14 1250 aa11.9□□□□□ -0.5
TP53-225ENST00000619485 OLFM4Q6UX06 510 aa11.9□□□□□ -0.5
TP53-225ENST00000619485 NBPF3Q9H094 633 aa11.9□□□□□ -0.5
TP53-225ENST00000619485 TACC3Q9Y6A5 838 aa11.9□□□□□ -0.5
TP53-225ENST00000619485 UBE2Q2LH0YL09 131 aa11.9□□□□□ -0.5
TP53-225ENST00000619485 BCAMP50895 628 aa11.9□□□□□ -0.5
TP53-225ENST00000619485 ETF1P62495 437 aaKnown RBP11.9□□□□□ -0.5
TP53-225ENST00000619485 BMS1Q14692 1282 aaKnown RBP11.9□□□□□ -0.5
TP53-225ENST00000619485 LRRFIP1Q32MZ4 808 aaKnown RBP11.9□□□□□ -0.5
TP53-225ENST00000619485 MB21D2Q8IYB1 491 aaPredicted RBP11.9□□□□□ -0.5
TP53-225ENST00000619485 BPIFA3Q9BQP9 254 aa11.9□□□□□ -0.5
TP53-225ENST00000619485 NOL10Q9BSC4 688 aaKnown RBP11.9□□□□□ -0.5
TP53-225ENST00000619485 FANCLQ9NW38 375 aa11.9□□□□□ -0.5
TP53-225ENST00000619485 BTAF1O14981 1849 aa11.9□□□□□ -0.51
TP53-225ENST00000619485 RREB1Q92766 1687 aa11.89□□□□□ -0.51
TP53-225ENST00000619485 PDE8AO60658 829 aa11.89□□□□□ -0.51
TP53-225ENST00000619485 SEC31AO94979 1220 aaKnown RBP11.89□□□□□ -0.51
TP53-225ENST00000619485 BRD2P25440 801 aaKnown RBP11.89□□□□□ -0.51
TP53-225ENST00000619485 HSPA1LP34931 641 aa11.89□□□□□ -0.51
TP53-225ENST00000619485 MYL5Q02045 173 aa11.89□□□□□ -0.51
TP53-225ENST00000619485 EVX2Q03828 476 aa11.89□□□□□ -0.51
TP53-225ENST00000619485 CCDC102BQ68D86 513 aa11.89□□□□□ -0.51
TP53-225ENST00000619485 BARGINQ6ZT62 677 aa11.89□□□□□ -0.51
TP53-225ENST00000619485 CCDC82Q8N4S0 544 aa11.89□□□□□ -0.51
TP53-225ENST00000619485 CNNM3Q8NE01 707 aa11.89□□□□□ -0.51
TP53-225ENST00000619485 ZC3H15Q8WU90 426 aaKnown RBP11.89□□□□□ -0.51
TP53-225ENST00000619485 CARD6Q9BX69 1037 aa11.89□□□□□ -0.51
TP53-225ENST00000619485 L2HGDHQ9H9P8 463 aa11.89□□□□□ -0.51
TP53-225ENST00000619485 USP21Q9UK80 565 aa11.89□□□□□ -0.51
TP53-225ENST00000619485 JAG2Q9Y219 1238 aa11.89□□□□□ -0.51
TP53-225ENST00000619485 MYH15Q9Y2K3 1946 aa11.89□□□□□ -0.51
TP53-225ENST00000619485 IDH1O75874 414 aaKnown RBP11.89□□□□□ -0.51
TP53-225ENST00000619485 ATP2B1P20020 1258 aa11.89□□□□□ -0.51
TP53-225ENST00000619485 CDK11BP21127 795 aaKnown RBP11.89□□□□□ -0.51
TP53-225ENST00000619485 TRIM29Q14134 588 aa11.89□□□□□ -0.51
TP53-225ENST00000619485 SHC4Q6S5L8 630 aa11.89□□□□□ -0.51
TP53-225ENST00000619485 TMCO3Q6UWJ1 677 aa11.89□□□□□ -0.51
TP53-225ENST00000619485 TRERF1Q96PN7 1200 aa11.89□□□□□ -0.51
TP53-225ENST00000619485 SENP2Q9HC62 589 aa11.89□□□□□ -0.51
TP53-225ENST00000619485 GPR108Q9NPR9 543 aa11.89□□□□□ -0.51
TP53-225ENST00000619485 LRP5O75197 1615 aa11.88□□□□□ -0.51
TP53-225ENST00000619485 B4E1Z4 1266 aa11.88□□□□□ -0.51
TP53-225ENST00000619485 FOXN1O15353 648 aa11.88□□□□□ -0.51
TP53-225ENST00000619485 SLC39A14Q15043 492 aa11.88□□□□□ -0.51
TP53-225ENST00000619485 KRT40Q6A162 431 aa11.88□□□□□ -0.51
TP53-225ENST00000619485 ARGLU1Q9NWB6 273 aaPredicted RBP11.88□□□□□ -0.51
TP53-225ENST00000619485 THRAP3Q9Y2W1 955 aaKnown RBP11.88□□□□□ -0.51
TP53-225ENST00000619485 ERVV-1B6SEH8 477 aa11.88□□□□□ -0.51
TP53-225ENST00000619485 CBFA2T2O43439 604 aa11.88□□□□□ -0.51
TP53-225ENST00000619485 PDE8BO95263 885 aa11.88□□□□□ -0.51
TP53-225ENST00000619485 H2AFXP16104 143 aaPredicted RBP11.88□□□□□ -0.51
TP53-225ENST00000619485 RASGRF1Q13972 1273 aa11.88□□□□□ -0.51
TP53-225ENST00000619485 LONRF3Q496Y0 759 aa11.88□□□□□ -0.51
TP53-225ENST00000619485 SLC9C2Q5TAH2 1124 aa11.88□□□□□ -0.51
TP53-225ENST00000619485 APPBP2Q92624 585 aa11.88□□□□□ -0.51
TP53-225ENST00000619485 HSD3B7Q9H2F3 369 aa11.88□□□□□ -0.51
TP53-225ENST00000619485 FHOD1Q9Y613 1164 aa11.88□□□□□ -0.51
TP53-225ENST00000619485 MYH7P12883 1935 aa11.87□□□□□ -0.51
TP53-225ENST00000619485 PNMA6AP0CW24 399 aaPredicted RBP11.87□□□□□ -0.51
TP53-225ENST00000619485 ADKP55263 362 aaKnown RBP11.87□□□□□ -0.51
TP53-225ENST00000619485 GNG11P61952 73 aa11.87□□□□□ -0.51
TP53-225ENST00000619485 VPS72Q15906 364 aa11.87□□□□□ -0.51
TP53-225ENST00000619485 ZNF827Q17R98 1081 aa11.87□□□□□ -0.51
TP53-225ENST00000619485 CCDC93Q567U6 631 aa11.87□□□□□ -0.51
TP53-225ENST00000619485 TRMT44Q8IYL2 757 aaKnown RBP11.87□□□□□ -0.51
TP53-225ENST00000619485 JMYQ8N9B5 988 aa11.87□□□□□ -0.51
TP53-225ENST00000619485 SECISBP2LQ93073 1101 aaKnown RBP11.87□□□□□ -0.51
TP53-225ENST00000619485 TOMM22Q9NS69 142 aa11.87□□□□□ -0.51
TP53-225ENST00000619485 KCND1Q9NSA2 647 aa11.87□□□□□ -0.51
TP53-225ENST00000619485 ANGEL1Q9UNK9 670 aaKnown RBP11.87□□□□□ -0.51
TP53-225ENST00000619485 COL1A1P02452 1464 aaPredicted RBP11.87□□□□□ -0.51
TP53-225ENST00000619485 CCDC66A2RUB6 948 aa11.87□□□□□ -0.51
TP53-225ENST00000619485 IKBKBO14920 756 aa11.87□□□□□ -0.51
TP53-225ENST00000619485 CCP110O43303 1012 aa11.87□□□□□ -0.51
TP53-225ENST00000619485 PRKAB2O43741 272 aa11.87□□□□□ -0.51
TP53-225ENST00000619485 CDC27P30260 824 aa11.87□□□□□ -0.51
TP53-225ENST00000619485 EVCP57679 992 aa11.87□□□□□ -0.51
TP53-225ENST00000619485 TEX35Q5T0J7 233 aa11.87□□□□□ -0.51
TP53-225ENST00000619485 CPLX2Q6PUV4 134 aaKnown RBP11.87□□□□□ -0.51
TP53-225ENST00000619485 CYB5R4Q7L1T6 521 aa11.87□□□□□ -0.51
TP53-225ENST00000619485 TBC1D10CQ8IV04 446 aa11.87□□□□□ -0.51
TP53-225ENST00000619485 CELF1Q92879 486 aaKnown RBP11.87□□□□□ -0.51
TP53-225ENST00000619485 CCDC34Q96HJ3 373 aa11.87□□□□□ -0.51
TP53-225ENST00000619485 SLC26A6Q9BXS9 759 aa11.87□□□□□ -0.51
TP53-225ENST00000619485 ZSWIM4Q9H7M6 989 aa11.87□□□□□ -0.51
TP53-225ENST00000619485 PCDHA5Q9Y5H7 936 aa11.87□□□□□ -0.51
TP53-225ENST00000619485 GNPATO15228 680 aa11.86□□□□□ -0.51
TP53-225ENST00000619485 FANCGO15287 622 aa11.86□□□□□ -0.51
TP53-225ENST00000619485 ZFYP08048 801 aaPredicted RBP11.86□□□□□ -0.51
TP53-225ENST00000619485 FGFR2P21802 821 aa11.86□□□□□ -0.51
TP53-225ENST00000619485 GYG1P46976 350 aa11.86□□□□□ -0.51
TP53-225ENST00000619485 ADGRA1Q86SQ6 560 aa11.86□□□□□ -0.51
TP53-225ENST00000619485 METTL16Q86W50 562 aaKnown RBP11.86□□□□□ -0.51
TP53-225ENST00000619485 GPR101Q96P66 508 aaPredicted RBP11.86□□□□□ -0.51
TP53-225ENST00000619485 DESI2Q9BSY9 194 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms