RNA–Protein interactions for RNA: ENST00000619117.1

C9orf50-202, Transcript of chromosome 9 open reading frame 50, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf50, Length 796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf50-202ENST00000619117 SIPA1L1O43166 1804 aa18.51■□□□□ 0.55
C9orf50-202ENST00000619117 FAM196BA6NMK8 535 aa18.51■□□□□ 0.55
C9orf50-202ENST00000619117 SLC9C2Q5TAH2 1124 aa18.51■□□□□ 0.55
C9orf50-202ENST00000619117 METTL16Q86W50 562 aaKnown RBP18.51■□□□□ 0.55
C9orf50-202ENST00000619117 RIOK1Q9BRS2 568 aaKnown RBP18.51■□□□□ 0.55
C9orf50-202ENST00000619117 ZFYVE28Q9HCC9 887 aa18.51■□□□□ 0.55
C9orf50-202ENST00000619117 TCRBV5S4A2TA0A5A2 114 aa18.5■□□□□ 0.55
C9orf50-202ENST00000619117 MOGSQ13724 837 aa18.5■□□□□ 0.55
C9orf50-202ENST00000619117 PKN2Q16513 984 aaKnown RBP18.5■□□□□ 0.55
C9orf50-202ENST00000619117 ANKRD23Q86SG2 305 aa18.5■□□□□ 0.55
C9orf50-202ENST00000619117 ECHDC1Q9NTX5 307 aa18.5■□□□□ 0.55
C9orf50-202ENST00000619117 PALD1Q9ULE6 856 aa18.5■□□□□ 0.55
C9orf50-202ENST00000619117 ZHX2Q9Y6X8 837 aa18.5■□□□□ 0.55
C9orf50-202ENST00000619117 ZNF532Q9HCE3 1301 aa18.49■□□□□ 0.55
C9orf50-202ENST00000619117 A0A0G2JLL6 359 aaPredicted RBP18.49■□□□□ 0.55
C9orf50-202ENST00000619117 MAGEB6P1A0A0J9YX57 407 aa18.49■□□□□ 0.55
C9orf50-202ENST00000619117 HLA-DOAP06340 250 aa18.49■□□□□ 0.55
C9orf50-202ENST00000619117 CAP2P40123 477 aa18.49■□□□□ 0.55
C9orf50-202ENST00000619117 USP5P45974 858 aa18.49■□□□□ 0.55
C9orf50-202ENST00000619117 AAMPQ13685 434 aa18.49■□□□□ 0.55
C9orf50-202ENST00000619117 PRRT2Q7Z6L0 340 aaPredicted RBP18.49■□□□□ 0.55
C9orf50-202ENST00000619117 FOXP4Q8IVH2 680 aaPredicted RBP18.49■□□□□ 0.55
C9orf50-202ENST00000619117 GPATCH3Q96I76 525 aa18.49■□□□□ 0.55
C9orf50-202ENST00000619117 DNAJC18Q9H819 358 aa18.49■□□□□ 0.55
C9orf50-202ENST00000619117 AFG3L2Q9Y4W6 797 aa18.49■□□□□ 0.55
C9orf50-202ENST00000619117 DDX60LQ5H9U9 1706 aaKnown RBP18.49■□□□□ 0.55
C9orf50-202ENST00000619117 ADD2P35612 726 aa18.48■□□□□ 0.55
C9orf50-202ENST00000619117 ERO1AQ96HE7 468 aa18.48■□□□□ 0.55
C9orf50-202ENST00000619117 TBC1D2Q9BYX2 928 aa18.48■□□□□ 0.55
C9orf50-202ENST00000619117 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.48■□□□□ 0.55
C9orf50-202ENST00000619117 SAP30BPQ9UHR5 308 aaKnown RBP18.48■□□□□ 0.55
C9orf50-202ENST00000619117 SP3Q02447 781 aa18.47■□□□□ 0.55
C9orf50-202ENST00000619117 RRP1BQ14684 758 aaKnown RBP18.47■□□□□ 0.55
C9orf50-202ENST00000619117 CRACR2BQ8N4Y2 399 aaPredicted RBP18.47■□□□□ 0.55
C9orf50-202ENST00000619117 CRNKL1Q9BZJ0 848 aaKnown RBP18.47■□□□□ 0.55
C9orf50-202ENST00000619117 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.47■□□□□ 0.55
C9orf50-202ENST00000619117 PHIPQ8WWQ0 1821 aa18.46■□□□□ 0.55
C9orf50-202ENST00000619117 PDHXO00330 501 aa18.46■□□□□ 0.55
C9orf50-202ENST00000619117 TLR2O60603 784 aa18.46■□□□□ 0.55
C9orf50-202ENST00000619117 HDAC1Q13547 482 aaPredicted RBP18.46■□□□□ 0.55
C9orf50-202ENST00000619117 GPAT2Q6NUI2 795 aa18.46■□□□□ 0.55
C9orf50-202ENST00000619117 FASTKD5Q7L8L6 764 aaKnown RBP18.46■□□□□ 0.55
C9orf50-202ENST00000619117 TRIM34Q9BYJ4 488 aa18.46■□□□□ 0.55
C9orf50-202ENST00000619117 EHD4Q9H223 541 aa18.46■□□□□ 0.55
C9orf50-202ENST00000619117 ADGRA2Q96PE1 1338 aa18.46■□□□□ 0.55
C9orf50-202ENST00000619117 UBE3CQ15386 1083 aa18.45■□□□□ 0.54
C9orf50-202ENST00000619117 FBXO46Q6PJ61 603 aaPredicted RBP18.45■□□□□ 0.54
C9orf50-202ENST00000619117 CCDC84Q86UT8 332 aaPredicted RBP18.45■□□□□ 0.54
C9orf50-202ENST00000619117 CD99L2Q8TCZ2 262 aa18.45■□□□□ 0.54
C9orf50-202ENST00000619117 GINM1Q9NU53 330 aa18.45■□□□□ 0.54
C9orf50-202ENST00000619117 TRIM75PA6NK02 468 aa18.44■□□□□ 0.54
C9orf50-202ENST00000619117 CCDC85CA6NKD9 419 aa18.44■□□□□ 0.54
C9orf50-202ENST00000619117 USP17L5A8MUK1 530 aa18.44■□□□□ 0.54
C9orf50-202ENST00000619117 ASNSP08243 561 aa18.44■□□□□ 0.54
C9orf50-202ENST00000619117 ZSCAN25Q6NSZ9 544 aa18.44■□□□□ 0.54
C9orf50-202ENST00000619117 OTOP1Q7RTM1 612 aa18.44■□□□□ 0.54
C9orf50-202ENST00000619117 TTC6Q86TZ1 520 aa18.44■□□□□ 0.54
C9orf50-202ENST00000619117 LCORLQ8N3X6 602 aa18.44■□□□□ 0.54
C9orf50-202ENST00000619117 SLC45A1Q9Y2W3 748 aa18.44■□□□□ 0.54
C9orf50-202ENST00000619117 TTC41PQ6P2S7 1318 aa18.44■□□□□ 0.54
C9orf50-202ENST00000619117 ATAD5Q96QE3 1844 aa18.44■□□□□ 0.54
C9orf50-202ENST00000619117 NAV1Q8NEY1 1877 aa18.43■□□□□ 0.54
C9orf50-202ENST00000619117 PTPRFP10586 1907 aa18.43■□□□□ 0.54
C9orf50-202ENST00000619117 MBD4O95243 580 aa18.43■□□□□ 0.54
C9orf50-202ENST00000619117 SLC4A8Q2Y0W8 1093 aa18.43■□□□□ 0.54
C9orf50-202ENST00000619117 TSHZ3Q63HK5 1081 aa18.43■□□□□ 0.54
C9orf50-202ENST00000619117 KBTBD3Q8NAB2 608 aa18.43■□□□□ 0.54
C9orf50-202ENST00000619117 ZNF280CQ8ND82 737 aa18.43■□□□□ 0.54
C9orf50-202ENST00000619117 GCC1Q96CN9 775 aa18.43■□□□□ 0.54
C9orf50-202ENST00000619117 PARK7Q99497 189 aaKnown RBP18.43■□□□□ 0.54
C9orf50-202ENST00000619117 SERPINB13Q9UIV8 391 aa18.43■□□□□ 0.54
C9orf50-202ENST00000619117 HPS5Q9UPZ3 1129 aa18.43■□□□□ 0.54
C9orf50-202ENST00000619117 TRIM17Q9Y577 477 aa18.43■□□□□ 0.54
C9orf50-202ENST00000619117 MYH1P12882 1939 aa18.43■□□□□ 0.54
C9orf50-202ENST00000619117 SLFNL1Q499Z3 407 aa18.42■□□□□ 0.54
C9orf50-202ENST00000619117 TATDN1Q6P1N9 297 aa18.42■□□□□ 0.54
C9orf50-202ENST00000619117 C17orf99Q6UX52 265 aa18.42■□□□□ 0.54
C9orf50-202ENST00000619117 GADL1Q6ZQY3 521 aa18.42■□□□□ 0.54
C9orf50-202ENST00000619117 PROCA1Q8NCQ7 364 aaPredicted RBP18.42■□□□□ 0.54
C9orf50-202ENST00000619117 WDR18Q9BV38 432 aa18.42■□□□□ 0.54
C9orf50-202ENST00000619117 ARMT1Q9H993 441 aa18.42■□□□□ 0.54
C9orf50-202ENST00000619117 AS3MTQ9HBK9 375 aa18.42■□□□□ 0.54
C9orf50-202ENST00000619117 DCP1AQ9NPI6 582 aaPredicted RBP18.42■□□□□ 0.54
C9orf50-202ENST00000619117 ZBTB21Q9ULJ3 1066 aa18.42■□□□□ 0.54
C9orf50-202ENST00000619117 AGTPBP1Q9UPW5 1226 aa18.42■□□□□ 0.54
C9orf50-202ENST00000619117 LOC285556D6RIA3 1793 aa18.41■□□□□ 0.54
C9orf50-202ENST00000619117 ERC2O15083 957 aa18.41■□□□□ 0.54
C9orf50-202ENST00000619117 CHGBP05060 677 aa18.41■□□□□ 0.54
C9orf50-202ENST00000619117 JAG1P78504 1218 aa18.41■□□□□ 0.54
C9orf50-202ENST00000619117 CAP1Q01518 475 aa18.41■□□□□ 0.54
C9orf50-202ENST00000619117 SPP2Q13103 211 aa18.41■□□□□ 0.54
C9orf50-202ENST00000619117 ARHGEF6Q15052 776 aa18.41■□□□□ 0.54
C9orf50-202ENST00000619117 SH3D19Q5HYK7 790 aa18.41■□□□□ 0.54
C9orf50-202ENST00000619117 PI4K2BQ8TCG2 481 aa18.41■□□□□ 0.54
C9orf50-202ENST00000619117 OTUD7AQ8TE49 926 aaPredicted RBP18.41■□□□□ 0.54
C9orf50-202ENST00000619117 SDR42E1Q8WUS8 393 aa18.41■□□□□ 0.54
C9orf50-202ENST00000619117 EFCC1Q9HA90 598 aa18.41■□□□□ 0.54
C9orf50-202ENST00000619117 SALL3Q9BXA9 1300 aa18.41■□□□□ 0.54
C9orf50-202ENST00000619117 MYH7P12883 1935 aa18.41■□□□□ 0.54
C9orf50-202ENST00000619117 GLRX3O76003 335 aaKnown RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms