RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.04□□□□□ -1.12
SRGAP3-213ENST00000618999 ANKRD2Q9GZV1 360 aa8.04□□□□□ -1.12
SRGAP3-213ENST00000618999 SERPINC1P01008 464 aa8.04□□□□□ -1.12
SRGAP3-213ENST00000618999 FAM160A1Q05DH4 1040 aa8.04□□□□□ -1.12
SRGAP3-213ENST00000618999 UBE4AQ14139 1066 aa8.04□□□□□ -1.12
SRGAP3-213ENST00000618999 CHADLQ6NUI6 762 aa8.04□□□□□ -1.12
SRGAP3-213ENST00000618999 CCAR2Q8N163 923 aaKnown RBP8.04□□□□□ -1.12
SRGAP3-213ENST00000618999 SPATA5Q8NB90 893 aa8.04□□□□□ -1.12
SRGAP3-213ENST00000618999 MRPS27Q92552 414 aaKnown RBP8.04□□□□□ -1.12
SRGAP3-213ENST00000618999 GTF3C6Q969F1 213 aa8.04□□□□□ -1.12
SRGAP3-213ENST00000618999 LRRC2Q9BYS8 371 aa8.04□□□□□ -1.12
SRGAP3-213ENST00000618999 TMX4Q9H1E5 349 aaPredicted RBP8.04□□□□□ -1.12
SRGAP3-213ENST00000618999 RIC1Q4ADV7 1423 aa8.04□□□□□ -1.12
SRGAP3-213ENST00000618999 WTIPA6NIX2 430 aaPredicted RBP8.04□□□□□ -1.12
SRGAP3-213ENST00000618999 ZFYP08048 801 aaPredicted RBP8.04□□□□□ -1.12
SRGAP3-213ENST00000618999 FGFR2P21802 821 aa8.04□□□□□ -1.12
SRGAP3-213ENST00000618999 BRD2P25440 801 aaKnown RBP8.04□□□□□ -1.12
SRGAP3-213ENST00000618999 CCT2P78371 535 aaKnown RBP8.04□□□□□ -1.12
SRGAP3-213ENST00000618999 DDR1Q08345 913 aa8.04□□□□□ -1.12
SRGAP3-213ENST00000618999 MAP3K12Q12852 859 aa8.04□□□□□ -1.12
SRGAP3-213ENST00000618999 NAA30Q147X3 362 aaPredicted RBP8.04□□□□□ -1.12
SRGAP3-213ENST00000618999 RBM17Q96I25 401 aaKnown RBP8.04□□□□□ -1.12
SRGAP3-213ENST00000618999 RTL9Q8NET4 1388 aa8.04□□□□□ -1.12
SRGAP3-213ENST00000618999 CBFA2T2O43439 604 aa8.03□□□□□ -1.12
SRGAP3-213ENST00000618999 DHX16O60231 1041 aaKnown RBP8.03□□□□□ -1.12
SRGAP3-213ENST00000618999 TUBB4AP04350 444 aa8.03□□□□□ -1.12
SRGAP3-213ENST00000618999 TM4SF1P30408 202 aa8.03□□□□□ -1.12
SRGAP3-213ENST00000618999 GRAPQ13588 217 aa8.03□□□□□ -1.12
SRGAP3-213ENST00000618999 GRAPLQ8TC17 118 aaPredicted RBP8.03□□□□□ -1.12
SRGAP3-213ENST00000618999 REPIN1Q9BWE0 567 aaKnown RBP8.03□□□□□ -1.12
SRGAP3-213ENST00000618999 HELLSQ9NRZ9 838 aa8.03□□□□□ -1.12
SRGAP3-213ENST00000618999 RAI14Q9P0K7 980 aa8.03□□□□□ -1.12
SRGAP3-213ENST00000618999 IRF6O14896 467 aa8.03□□□□□ -1.12
SRGAP3-213ENST00000618999 TPM1P09493 284 aa8.03□□□□□ -1.12
SRGAP3-213ENST00000618999 RASGRF1Q13972 1273 aa8.03□□□□□ -1.12
SRGAP3-213ENST00000618999 ATL3Q6DD88 541 aa8.03□□□□□ -1.12
SRGAP3-213ENST00000618999 OLFM4Q6UX06 510 aa8.03□□□□□ -1.12
SRGAP3-213ENST00000618999 PTPDC1A2A3K4 754 aa8.03□□□□□ -1.12
SRGAP3-213ENST00000618999 URI1O94763 535 aaPredicted RBP8.03□□□□□ -1.12
SRGAP3-213ENST00000618999 SLC3A2P08195 630 aaKnown RBP8.03□□□□□ -1.12
SRGAP3-213ENST00000618999 CCDC144BQ3MJ40 725 aa8.03□□□□□ -1.12
SRGAP3-213ENST00000618999 SARM1Q6SZW1 724 aa8.03□□□□□ -1.12
SRGAP3-213ENST00000618999 SYT10Q6XYQ8 523 aa8.03□□□□□ -1.12
SRGAP3-213ENST00000618999 C11orf57Q6ZUT1 292 aaPredicted RBP8.03□□□□□ -1.12
SRGAP3-213ENST00000618999 CCDC144CPQ8IYA2 1237 aa8.03□□□□□ -1.12
SRGAP3-213ENST00000618999 ZNF622Q969S3 477 aaKnown RBP eCLIP8.03□□□□□ -1.12
SRGAP3-213ENST00000618999 PIH1D3Q9NQM4 214 aaKnown RBP8.03□□□□□ -1.12
SRGAP3-213ENST00000618999 JAG2Q9Y219 1238 aa8.03□□□□□ -1.12
SRGAP3-213ENST00000618999 C4BP0C0L5 1744 aa8.02□□□□□ -1.12
SRGAP3-213ENST00000618999 C6orf229H3BNL8 230 aa8.02□□□□□ -1.12
SRGAP3-213ENST00000618999 BIN1O00499 593 aa8.02□□□□□ -1.12
SRGAP3-213ENST00000618999 HIBADHP31937 336 aaKnown RBP8.02□□□□□ -1.12
SRGAP3-213ENST00000618999 ZMYM1Q5SVZ6 1142 aa8.02□□□□□ -1.12
SRGAP3-213ENST00000618999 CREBRFQ8IUR6 639 aa8.02□□□□□ -1.12
SRGAP3-213ENST00000618999 AKT1S1Q96B36 256 aa8.02□□□□□ -1.12
SRGAP3-213ENST00000618999 LLPHQ9BRT6 129 aaKnown RBP8.02□□□□□ -1.12
SRGAP3-213ENST00000618999 IMPACTQ9P2X3 320 aa8.02□□□□□ -1.12
SRGAP3-213ENST00000618999 ZNF804BA4D1E1 1349 aa8.02□□□□□ -1.13
SRGAP3-213ENST00000618999 POLRMTO00411 1230 aaKnown RBP8.02□□□□□ -1.13
SRGAP3-213ENST00000618999 CFAP100Q494V2 611 aa8.02□□□□□ -1.13
SRGAP3-213ENST00000618999 ARHGAP29Q52LW3 1261 aa8.02□□□□□ -1.13
SRGAP3-213ENST00000618999 NAA16Q6N069 864 aaPredicted RBP8.02□□□□□ -1.13
SRGAP3-213ENST00000618999 CPLX2Q6PUV4 134 aaKnown RBP8.02□□□□□ -1.13
SRGAP3-213ENST00000618999 MAGEB6Q8N7X4 407 aa8.02□□□□□ -1.13
SRGAP3-213ENST00000618999 APPBP2Q92624 585 aa8.02□□□□□ -1.13
SRGAP3-213ENST00000618999 OSBP2Q969R2 916 aa8.02□□□□□ -1.13
SRGAP3-213ENST00000618999 AIDAQ96BJ3 306 aa8.02□□□□□ -1.13
SRGAP3-213ENST00000618999 PGBD1Q96JS3 809 aa8.02□□□□□ -1.13
SRGAP3-213ENST00000618999 MORC2Q9Y6X9 1032 aaPredicted RBP8.02□□□□□ -1.13
SRGAP3-213ENST00000618999 BRWD3Q6RI45 1802 aa8.02□□□□□ -1.13
SRGAP3-213ENST00000618999 PPFIA3O75145 1194 aa8.02□□□□□ -1.13
SRGAP3-213ENST00000618999 SLC15A2Q16348 729 aa8.02□□□□□ -1.13
SRGAP3-213ENST00000618999 IFNKQ9P0W0 207 aa8.02□□□□□ -1.13
SRGAP3-213ENST00000618999 DNAI1Q9UI46 699 aa8.02□□□□□ -1.13
SRGAP3-213ENST00000618999 ZSCAN12O43309 604 aa8.01□□□□□ -1.13
SRGAP3-213ENST00000618999 ARID4AP29374 1257 aaPredicted RBP8.01□□□□□ -1.13
SRGAP3-213ENST00000618999 RESTQ13127 1097 aa8.01□□□□□ -1.13
SRGAP3-213ENST00000618999 ARID5BQ14865 1188 aa8.01□□□□□ -1.13
SRGAP3-213ENST00000618999 TERF2Q15554 542 aa8.01□□□□□ -1.13
SRGAP3-213ENST00000618999 RALYLQ86SE5 291 aaKnown RBP8.01□□□□□ -1.13
SRGAP3-213ENST00000618999 PDILTQ8N807 584 aa8.01□□□□□ -1.13
SRGAP3-213ENST00000618999 MRRFQ96E11 262 aaKnown RBP8.01□□□□□ -1.13
SRGAP3-213ENST00000618999 C8orf76Q96K31 380 aa8.01□□□□□ -1.13
SRGAP3-213ENST00000618999 WWC3Q9ULE0 1092 aa8.01□□□□□ -1.13
SRGAP3-213ENST00000618999 COL5A3P25940 1745 aaPredicted RBP8.01□□□□□ -1.13
SRGAP3-213ENST00000618999 MAST3O60307 1309 aa8.01□□□□□ -1.13
SRGAP3-213ENST00000618999 ZNF532Q9HCE3 1301 aa8.01□□□□□ -1.13
SRGAP3-213ENST00000618999 UNCXA6NJT0 531 aa8.01□□□□□ -1.13
SRGAP3-213ENST00000618999 POLR3GO15318 223 aaPredicted RBP8.01□□□□□ -1.13
SRGAP3-213ENST00000618999 LMOD1P29536 600 aaPredicted RBP8.01□□□□□ -1.13
SRGAP3-213ENST00000618999 TOB2Q14106 344 aaPredicted RBP8.01□□□□□ -1.13
SRGAP3-213ENST00000618999 DHX32Q7L7V1 743 aaKnown RBP8.01□□□□□ -1.13
SRGAP3-213ENST00000618999 JMYQ8N9B5 988 aa8.01□□□□□ -1.13
SRGAP3-213ENST00000618999 KCNG4Q8TDN1 519 aa8.01□□□□□ -1.13
SRGAP3-213ENST00000618999 PUS7LQ9H0K6 701 aaKnown RBP8.01□□□□□ -1.13
SRGAP3-213ENST00000618999 HOOK1Q9UJC3 728 aaKnown RBP8.01□□□□□ -1.13
SRGAP3-213ENST00000618999 ANKRD36CQ5JPF3 1778 aa8.01□□□□□ -1.13
SRGAP3-213ENST00000618999 SBF2Q86WG5 1849 aa8.01□□□□□ -1.13
SRGAP3-213ENST00000618999 G3V3G9 751 aa8.01□□□□□ -1.13
SRGAP3-213ENST00000618999 M0R2C6 588 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms