RNA–Protein interactions for RNA: ENST00000617757.1

TARDBP-219, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 434 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-219ENST00000617757 FAM83AQ86UY5 434 aa9.56□□□□□ -0.88
TARDBP-219ENST00000617757 STK11IPQ8N1F8 1099 aa9.56□□□□□ -0.88
TARDBP-219ENST00000617757 NCOA7Q8NI08 942 aa9.56□□□□□ -0.88
TARDBP-219ENST00000617757 TRPM4Q8TD43 1214 aa9.56□□□□□ -0.88
TARDBP-219ENST00000617757 FAM151AQ8WW52 585 aa9.56□□□□□ -0.88
TARDBP-219ENST00000617757 UPF3BQ9BZI7 483 aaKnown RBP9.56□□□□□ -0.88
TARDBP-219ENST00000617757 VEZTQ9HBM0 779 aa9.56□□□□□ -0.88
TARDBP-219ENST00000617757 ADARB2Q9NS39 739 aaKnown RBP9.56□□□□□ -0.88
TARDBP-219ENST00000617757 HACL1Q9UJ83 578 aa9.56□□□□□ -0.88
TARDBP-219ENST00000617757 CYP46A1Q9Y6A2 500 aa9.56□□□□□ -0.88
TARDBP-219ENST00000617757 MYH4Q9Y623 1939 aa9.56□□□□□ -0.88
TARDBP-219ENST00000617757 NEDD4P46934 1319 aa9.56□□□□□ -0.88
TARDBP-219ENST00000617757 ATRNL1Q5VV63 1379 aa9.55□□□□□ -0.88
TARDBP-219ENST00000617757 POTECB2RU33 542 aa9.55□□□□□ -0.88
TARDBP-219ENST00000617757 SLC3A2P08195 630 aaKnown RBP9.55□□□□□ -0.88
TARDBP-219ENST00000617757 HMGB1P09429 215 aaKnown RBP9.55□□□□□ -0.88
TARDBP-219ENST00000617757 RPS6KB1P23443 525 aa9.55□□□□□ -0.88
TARDBP-219ENST00000617757 TNNI2P48788 182 aa9.55□□□□□ -0.88
TARDBP-219ENST00000617757 PDE4BQ07343 736 aa9.55□□□□□ -0.88
TARDBP-219ENST00000617757 TRDNQ13061 729 aa9.55□□□□□ -0.88
TARDBP-219ENST00000617757 BLOC1S2Q6QNY1 142 aa9.55□□□□□ -0.88
TARDBP-219ENST00000617757 SH3BP5LQ7L8J4 393 aa9.55□□□□□ -0.88
TARDBP-219ENST00000617757 MB21D2Q8IYB1 491 aaPredicted RBP9.55□□□□□ -0.88
TARDBP-219ENST00000617757 IL27Q8NEV9 243 aa9.55□□□□□ -0.88
TARDBP-219ENST00000617757 NKX2-3Q8TAU0 364 aa9.55□□□□□ -0.88
TARDBP-219ENST00000617757 DYNLL2Q96FJ2 89 aa9.55□□□□□ -0.88
TARDBP-219ENST00000617757 TTC14Q96N46 770 aa9.55□□□□□ -0.88
TARDBP-219ENST00000617757 KRT23Q9C075 422 aa9.55□□□□□ -0.88
TARDBP-219ENST00000617757 DHX36Q9H2U1 1008 aaKnown RBP9.55□□□□□ -0.88
TARDBP-219ENST00000617757 RNF41Q9H4P4 317 aaPredicted RBP9.55□□□□□ -0.88
TARDBP-219ENST00000617757 CNNM2Q9H8M5 875 aa9.55□□□□□ -0.88
TARDBP-219ENST00000617757 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.55□□□□□ -0.88
TARDBP-219ENST00000617757 ASTN2O75129 1339 aaPredicted RBP9.55□□□□□ -0.88
TARDBP-219ENST00000617757 B4E1Z4 1266 aa9.54□□□□□ -0.88
TARDBP-219ENST00000617757 ORC4O43929 436 aa9.54□□□□□ -0.88
TARDBP-219ENST00000617757 PRDM1O75626 825 aa9.54□□□□□ -0.88
TARDBP-219ENST00000617757 HLA-DOAP06340 250 aa9.54□□□□□ -0.88
TARDBP-219ENST00000617757 PCP11498 1178 aaKnown RBP9.54□□□□□ -0.88
TARDBP-219ENST00000617757 ANP32AP39687 249 aaKnown RBP9.54□□□□□ -0.88
TARDBP-219ENST00000617757 CDK8P49336 464 aa9.54□□□□□ -0.88
TARDBP-219ENST00000617757 EXOSC10Q01780 885 aaKnown RBP9.54□□□□□ -0.88
TARDBP-219ENST00000617757 GABPAQ06546 454 aa9.54□□□□□ -0.88
TARDBP-219ENST00000617757 ANGEL2Q5VTE6 544 aaKnown RBP9.54□□□□□ -0.88
TARDBP-219ENST00000617757 C16orf86Q6ZW13 317 aa9.54□□□□□ -0.88
TARDBP-219ENST00000617757 USP50Q70EL3 339 aaPredicted RBP9.54□□□□□ -0.88
TARDBP-219ENST00000617757 DHX32Q7L7V1 743 aaKnown RBP9.54□□□□□ -0.88
TARDBP-219ENST00000617757 RALYLQ86SE5 291 aaKnown RBP9.54□□□□□ -0.88
TARDBP-219ENST00000617757 METTL16Q86W50 562 aaKnown RBP9.54□□□□□ -0.88
TARDBP-219ENST00000617757 ZSCAN29Q8IWY8 852 aaPredicted RBP9.54□□□□□ -0.88
TARDBP-219ENST00000617757 EHD4Q9H223 541 aa9.54□□□□□ -0.88
TARDBP-219ENST00000617757 ALDH8A1Q9H2A2 487 aaPredicted RBP9.54□□□□□ -0.88
TARDBP-219ENST00000617757 TOMM22Q9NS69 142 aa9.54□□□□□ -0.88
TARDBP-219ENST00000617757 PI4KBQ9UBF8 816 aa9.54□□□□□ -0.88
TARDBP-219ENST00000617757 PGAP2Q9UHJ9 254 aa9.54□□□□□ -0.88
TARDBP-219ENST00000617757 SCAF8Q9UPN6 1271 aaKnown RBP9.54□□□□□ -0.88
TARDBP-219ENST00000617757 IQCA1LA6NCM1 817 aa9.53□□□□□ -0.88
TARDBP-219ENST00000617757 ST18O60284 1047 aa9.53□□□□□ -0.88
TARDBP-219ENST00000617757 KDM4AO75164 1064 aa9.53□□□□□ -0.88
TARDBP-219ENST00000617757 CD2BP2O95400 341 aaKnown RBP9.53□□□□□ -0.88
TARDBP-219ENST00000617757 MCM5P33992 734 aa9.53□□□□□ -0.88
TARDBP-219ENST00000617757 EPHX2P34913 555 aa9.53□□□□□ -0.88
TARDBP-219ENST00000617757 ANTXR2P58335 489 aa9.53□□□□□ -0.88
TARDBP-219ENST00000617757 TNFAIP1Q13829 316 aa9.53□□□□□ -0.88
TARDBP-219ENST00000617757 RASA3Q14644 834 aa9.53□□□□□ -0.88
TARDBP-219ENST00000617757 RRP12Q5JTH9 1297 aaKnown RBP9.53□□□□□ -0.88
TARDBP-219ENST00000617757 CYB5R4Q7L1T6 521 aa9.53□□□□□ -0.88
TARDBP-219ENST00000617757 CHST3Q7LGC8 479 aa9.53□□□□□ -0.88
TARDBP-219ENST00000617757 APOBEC3FQ8IUX4 373 aaKnown RBP9.53□□□□□ -0.88
TARDBP-219ENST00000617757 FOXP4Q8IVH2 680 aaPredicted RBP9.53□□□□□ -0.88
TARDBP-219ENST00000617757 SLC44A5Q8NCS7 719 aa9.53□□□□□ -0.88
TARDBP-219ENST00000617757 SNX21Q969T3 373 aa9.53□□□□□ -0.88
TARDBP-219ENST00000617757 TCEANC2Q96MN5 208 aa9.53□□□□□ -0.88
TARDBP-219ENST00000617757 TMEM39BQ9GZU3 492 aa9.53□□□□□ -0.88
TARDBP-219ENST00000617757 MKNK2Q9HBH9 465 aa9.53□□□□□ -0.88
TARDBP-219ENST00000617757 PDRG1Q9NUG6 133 aa9.53□□□□□ -0.88
TARDBP-219ENST00000617757 ZSWIM5Q9P217 1185 aa9.53□□□□□ -0.88
TARDBP-219ENST00000617757 SWAP70Q9UH65 585 aa9.53□□□□□ -0.88
TARDBP-219ENST00000617757 SERPINB13Q9UIV8 391 aa9.53□□□□□ -0.88
TARDBP-219ENST00000617757 WDR19Q8NEZ3 1342 aa9.53□□□□□ -0.88
TARDBP-219ENST00000617757 PITPNM2Q9BZ72 1349 aa9.53□□□□□ -0.88
TARDBP-219ENST00000617757 PRC1O43663 620 aa9.52□□□□□ -0.89
TARDBP-219ENST00000617757 RANBP6O60518 1105 aaKnown RBP9.52□□□□□ -0.89
TARDBP-219ENST00000617757 SLURP2P0DP57 97 aa9.52□□□□□ -0.89
TARDBP-219ENST00000617757 RASA1P20936 1047 aa9.52□□□□□ -0.89
TARDBP-219ENST00000617757 SHMT1P34896 483 aa9.52□□□□□ -0.89
TARDBP-219ENST00000617757 NT5C2P49902 561 aa9.52□□□□□ -0.89
TARDBP-219ENST00000617757 AK2P54819 239 aa9.52□□□□□ -0.89
TARDBP-219ENST00000617757 TOB2Q14106 344 aaPredicted RBP9.52□□□□□ -0.89
TARDBP-219ENST00000617757 DOCK1Q14185 1865 aa9.52□□□□□ -0.89
TARDBP-219ENST00000617757 TATDN1Q6P1N9 297 aa9.52□□□□□ -0.89
TARDBP-219ENST00000617757 Q6ZUG5 572 aa9.52□□□□□ -0.89
TARDBP-219ENST00000617757 CDAN1Q8IWY9 1227 aa9.52□□□□□ -0.89
TARDBP-219ENST00000617757 ZNF444Q8N0Y2 327 aaPredicted RBP9.52□□□□□ -0.89
TARDBP-219ENST00000617757 FBXL16Q8N461 479 aa9.52□□□□□ -0.89
TARDBP-219ENST00000617757 CRACR2BQ8N4Y2 399 aaPredicted RBP9.52□□□□□ -0.89
TARDBP-219ENST00000617757 ESR2Q92731 530 aa9.52□□□□□ -0.89
TARDBP-219ENST00000617757 TEPSINQ96N21 525 aa9.52□□□□□ -0.89
TARDBP-219ENST00000617757 CSRNP1Q96S65 589 aa9.52□□□□□ -0.89
TARDBP-219ENST00000617757 LRRC2Q9BYS8 371 aa9.52□□□□□ -0.89
TARDBP-219ENST00000617757 AGXT2Q9BYV1 514 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms