RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 RIMBP2O15034 1052 aa20.19■□□□□ 0.82
PCDHGC3-205ENST00000617641 IGSF3O75054 1194 aa20.19■□□□□ 0.82
PCDHGC3-205ENST00000617641 LETM1O95202 739 aaPredicted RBP20.19■□□□□ 0.82
PCDHGC3-205ENST00000617641 POLR3DP05423 398 aaPredicted RBP20.19■□□□□ 0.82
PCDHGC3-205ENST00000617641 USP5P45974 858 aa20.19■□□□□ 0.82
PCDHGC3-205ENST00000617641 POTEAQ6S8J7 498 aa20.19■□□□□ 0.82
PCDHGC3-205ENST00000617641 RNF214Q8ND24 703 aa20.19■□□□□ 0.82
PCDHGC3-205ENST00000617641 RCOR1Q9UKL0 485 aa20.19■□□□□ 0.82
PCDHGC3-205ENST00000617641 MROH7-TTC4A0A0A0MT08 1334 aa20.19■□□□□ 0.82
PCDHGC3-205ENST00000617641 PDE6BP35913 854 aa20.19■□□□□ 0.82
PCDHGC3-205ENST00000617641 SSRP1Q08945 709 aaKnown RBP20.19■□□□□ 0.82
PCDHGC3-205ENST00000617641 ATL3Q6DD88 541 aa20.19■□□□□ 0.82
PCDHGC3-205ENST00000617641 BICD2Q8TD16 824 aa20.19■□□□□ 0.82
PCDHGC3-205ENST00000617641 MKRN1Q9UHC7 482 aaKnown RBP20.19■□□□□ 0.82
PCDHGC3-205ENST00000617641 ORC4O43929 436 aa20.18■□□□□ 0.82
PCDHGC3-205ENST00000617641 LDHCP07864 332 aa20.18■□□□□ 0.82
PCDHGC3-205ENST00000617641 IFNAR1P17181 557 aa20.18■□□□□ 0.82
PCDHGC3-205ENST00000617641 KIF23Q02241 960 aaPredicted RBP20.18■□□□□ 0.82
PCDHGC3-205ENST00000617641 MFSD14BQ5SR56 506 aa20.18■□□□□ 0.82
PCDHGC3-205ENST00000617641 RTFDC1Q9BY42 306 aaPredicted RBP20.18■□□□□ 0.82
PCDHGC3-205ENST00000617641 FMNL1O95466 1100 aaPredicted RBP20.18■□□□□ 0.82
PCDHGC3-205ENST00000617641 BAG3O95817 575 aa20.18■□□□□ 0.82
PCDHGC3-205ENST00000617641 PPP4CP60510 307 aa20.18■□□□□ 0.82
PCDHGC3-205ENST00000617641 KRT40Q6A162 431 aa20.18■□□□□ 0.82
PCDHGC3-205ENST00000617641 IQCA1Q86XH1 822 aa20.18■□□□□ 0.82
PCDHGC3-205ENST00000617641 CMTR1Q8N1G2 835 aaKnown RBP20.18■□□□□ 0.82
PCDHGC3-205ENST00000617641 FANCBQ8NB91 859 aa20.18■□□□□ 0.82
PCDHGC3-205ENST00000617641 NOL10Q9BSC4 688 aaKnown RBP20.18■□□□□ 0.82
PCDHGC3-205ENST00000617641 DACT1Q9NYF0 836 aa20.18■□□□□ 0.82
PCDHGC3-205ENST00000617641 STK36Q9NRP7 1315 aa20.17■□□□□ 0.82
PCDHGC3-205ENST00000617641 SLC3A2P08195 630 aaKnown RBP20.17■□□□□ 0.82
PCDHGC3-205ENST00000617641 FAM47AQ5JRC9 791 aa20.17■□□□□ 0.82
PCDHGC3-205ENST00000617641 RGPD3A6NKT7 1758 aaPredicted RBP20.17■□□□□ 0.82
PCDHGC3-205ENST00000617641 RGPD4Q7Z3J3 1758 aa20.17■□□□□ 0.82
PCDHGC3-205ENST00000617641 RCAN1P53805 252 aa20.16■□□□□ 0.82
PCDHGC3-205ENST00000617641 IFIT1BQ5T764 474 aaKnown RBP20.16■□□□□ 0.82
PCDHGC3-205ENST00000617641 BRAPQ7Z569 592 aa20.16■□□□□ 0.82
PCDHGC3-205ENST00000617641 CCDC82Q8N4S0 544 aa20.16■□□□□ 0.82
PCDHGC3-205ENST00000617641 TGFBRAP1Q8WUH2 860 aa20.16■□□□□ 0.82
PCDHGC3-205ENST00000617641 ALDH1B1P30837 517 aa20.16■□□□□ 0.82
PCDHGC3-205ENST00000617641 GUCY1A2P33402 732 aa20.16■□□□□ 0.82
PCDHGC3-205ENST00000617641 BTDP43251 543 aa20.16■□□□□ 0.82
PCDHGC3-205ENST00000617641 NMT2O60551 498 aa20.15■□□□□ 0.82
PCDHGC3-205ENST00000617641 PDE4BQ07343 736 aa20.15■□□□□ 0.82
PCDHGC3-205ENST00000617641 EZH2Q15910 746 aaKnown RBP20.15■□□□□ 0.82
PCDHGC3-205ENST00000617641 C12orf60Q5U649 245 aa20.15■□□□□ 0.82
PCDHGC3-205ENST00000617641 MYSM1Q5VVJ2 828 aa20.15■□□□□ 0.82
PCDHGC3-205ENST00000617641 MPNDQ8N594 471 aa20.15■□□□□ 0.82
PCDHGC3-205ENST00000617641 RGS22Q8NE09 1264 aa20.15■□□□□ 0.82
PCDHGC3-205ENST00000617641 MASTLQ96GX5 879 aa20.15■□□□□ 0.82
PCDHGC3-205ENST00000617641 NUP62CLQ9H1M0 184 aa20.15■□□□□ 0.82
PCDHGC3-205ENST00000617641 RTEL1Q9NZ71 1219 aa20.15■□□□□ 0.82
PCDHGC3-205ENST00000617641 DLEC1Q9Y238 1755 aa20.15■□□□□ 0.82
PCDHGC3-205ENST00000617641 CCDC196A0A1B0GTZ2 297 aa20.15■□□□□ 0.82
PCDHGC3-205ENST00000617641 NR1I2O75469 434 aa20.15■□□□□ 0.82
PCDHGC3-205ENST00000617641 GTF2IP78347 998 aa20.15■□□□□ 0.82
PCDHGC3-205ENST00000617641 CAMK4Q16566 473 aa20.15■□□□□ 0.82
PCDHGC3-205ENST00000617641 NBPF11Q86T75 865 aa20.15■□□□□ 0.82
PCDHGC3-205ENST00000617641 CLIC4Q9Y696 253 aa20.15■□□□□ 0.82
PCDHGC3-205ENST00000617641 NAV1Q8NEY1 1877 aa20.14■□□□□ 0.82
PCDHGC3-205ENST00000617641 TRIM22Q8IYM9 498 aa20.14■□□□□ 0.82
PCDHGC3-205ENST00000617641 CRACR2BQ8N4Y2 399 aaPredicted RBP20.14■□□□□ 0.82
PCDHGC3-205ENST00000617641 TBC1D22AQ8WUA7 517 aa20.14■□□□□ 0.82
PCDHGC3-205ENST00000617641 ANP32BQ92688 251 aaKnown RBP20.14■□□□□ 0.82
PCDHGC3-205ENST00000617641 ZNF622Q969S3 477 aaKnown RBP eCLIP20.14■□□□□ 0.82
PCDHGC3-205ENST00000617641 FAM205AQ6ZU69 1335 aa20.14■□□□□ 0.81
PCDHGC3-205ENST00000617641 EN1Q05925 392 aaPredicted RBP20.14■□□□□ 0.81
PCDHGC3-205ENST00000617641 TRIM29Q14134 588 aa20.14■□□□□ 0.81
PCDHGC3-205ENST00000617641 DPP8Q6V1X1 898 aaPredicted RBP20.14■□□□□ 0.81
PCDHGC3-205ENST00000617641 CATIPQ7Z7H3 387 aa20.14■□□□□ 0.81
PCDHGC3-205ENST00000617641 MAPKAPK5Q8IW41 473 aa20.14■□□□□ 0.81
PCDHGC3-205ENST00000617641 DYNLL2Q96FJ2 89 aa20.14■□□□□ 0.81
PCDHGC3-205ENST00000617641 FUCA2Q9BTY2 467 aa20.14■□□□□ 0.81
PCDHGC3-205ENST00000617641 COA1Q9GZY4 146 aa20.14■□□□□ 0.81
PCDHGC3-205ENST00000617641 DDX19AQ9NUU7 478 aaKnown RBP20.14■□□□□ 0.81
PCDHGC3-205ENST00000617641 GPR75-ASB3A0A0A6YYF3 556 aa20.13■□□□□ 0.81
PCDHGC3-205ENST00000617641 ME1P48163 572 aa20.13■□□□□ 0.81
PCDHGC3-205ENST00000617641 FBXW7Q969H0 707 aa20.13■□□□□ 0.81
PCDHGC3-205ENST00000617641 ZC3H12CQ9C0D7 883 aaKnown RBP20.13■□□□□ 0.81
PCDHGC3-205ENST00000617641 SAP30BPQ9UHR5 308 aaKnown RBP20.13■□□□□ 0.81
PCDHGC3-205ENST00000617641 WASF1Q92558 559 aa20.13■□□□□ 0.81
PCDHGC3-205ENST00000617641 CDK5RAP2Q96SN8 1893 aa20.13■□□□□ 0.81
PCDHGC3-205ENST00000617641 TSPY2A6NKD2 308 aa20.12■□□□□ 0.81
PCDHGC3-205ENST00000617641 CCDC173Q0VFZ6 552 aa20.12■□□□□ 0.81
PCDHGC3-205ENST00000617641 SLC15A2Q16348 729 aa20.12■□□□□ 0.81
PCDHGC3-205ENST00000617641 C2CD5Q86YS7 1000 aa20.12■□□□□ 0.81
PCDHGC3-205ENST00000617641 CCAR1Q8IX12 1150 aaKnown RBP20.12■□□□□ 0.81
PCDHGC3-205ENST00000617641 LINC00301Q8NCQ3 95 aa20.12■□□□□ 0.81
PCDHGC3-205ENST00000617641 POLR3EQ9NVU0 708 aa20.12■□□□□ 0.81
PCDHGC3-205ENST00000617641 TROAPQ12815 778 aa20.11■□□□□ 0.81
PCDHGC3-205ENST00000617641 GNL2Q13823 731 aaKnown RBP20.11■□□□□ 0.81
PCDHGC3-205ENST00000617641 MAP3K11Q16584 847 aa20.11■□□□□ 0.81
PCDHGC3-205ENST00000617641 DOK7Q18PE1 504 aa20.11■□□□□ 0.81
PCDHGC3-205ENST00000617641 TEX11Q8IYF3 940 aa20.11■□□□□ 0.81
PCDHGC3-205ENST00000617641 CAMKK2Q96RR4 588 aa20.11■□□□□ 0.81
PCDHGC3-205ENST00000617641 TNMDQ9H2S6 317 aa20.11■□□□□ 0.81
PCDHGC3-205ENST00000617641 GOLPH3LQ9H4A5 285 aa20.11■□□□□ 0.81
PCDHGC3-205ENST00000617641 CLSTN2Q9H4D0 955 aa20.11■□□□□ 0.81
PCDHGC3-205ENST00000617641 DEXIO95424 95 aa20.11■□□□□ 0.81
PCDHGC3-205ENST00000617641 STK38Q15208 465 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms