RNA–Protein interactions for RNA: ENST00000617617.4

PDPN-211, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 2,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-211ENST00000617617 MAPKAPK5Q8IW41 473 aa13.85□□□□□ -0.19
PDPN-211ENST00000617617 IGDCC4Q8TDY8 1250 aa13.85□□□□□ -0.19
PDPN-211ENST00000617617 ANKS1AQ92625 1134 aa13.85□□□□□ -0.19
PDPN-211ENST00000617617 DAXXQ9UER7 740 aaPredicted RBP13.85□□□□□ -0.19
PDPN-211ENST00000617617 FAM198AQ9UFP1 575 aa13.85□□□□□ -0.19
PDPN-211ENST00000617617 CPA1P15085 419 aa13.85□□□□□ -0.19
PDPN-211ENST00000617617 NOVP48745 357 aa13.85□□□□□ -0.19
PDPN-211ENST00000617617 DLGAP5Q15398 846 aa13.85□□□□□ -0.19
PDPN-211ENST00000617617 CYB5R4Q7L1T6 521 aa13.85□□□□□ -0.19
PDPN-211ENST00000617617 PRMT6Q96LA8 375 aaPredicted RBP13.85□□□□□ -0.19
PDPN-211ENST00000617617 CWC22Q9HCG8 908 aaKnown RBP13.85□□□□□ -0.19
PDPN-211ENST00000617617 MYOZ2Q9NPC6 264 aa13.85□□□□□ -0.19
PDPN-211ENST00000617617 MINDY4BA8MYZ0 360 aa13.84□□□□□ -0.19
PDPN-211ENST00000617617 TMTC2Q8N394 836 aa13.84□□□□□ -0.19
PDPN-211ENST00000617617 PAPPA2Q9BXP8 1791 aa13.84□□□□□ -0.19
PDPN-211ENST00000617617 ZSWIM5Q9P217 1185 aa13.84□□□□□ -0.19
PDPN-211ENST00000617617 CIZ1Q9ULV3 898 aaPredicted RBP13.84□□□□□ -0.19
PDPN-211ENST00000617617 ANGEL1Q9UNK9 670 aaKnown RBP13.84□□□□□ -0.19
PDPN-211ENST00000617617 MYH6P13533 1939 aa13.84□□□□□ -0.19
PDPN-211ENST00000617617 B4E1Z4 1266 aa13.83□□□□□ -0.19
PDPN-211ENST00000617617 CYP2D6P10635 497 aa13.83□□□□□ -0.19
PDPN-211ENST00000617617 RGS22Q8NE09 1264 aa13.83□□□□□ -0.19
PDPN-211ENST00000617617 ZNF70Q9UC06 446 aaPredicted RBP13.83□□□□□ -0.19
PDPN-211ENST00000617617 TPCN1Q9ULQ1 816 aa13.83□□□□□ -0.19
PDPN-211ENST00000617617 ZBTB12Q9Y330 459 aaPredicted RBP13.83□□□□□ -0.19
PDPN-211ENST00000617617 PFKFB2O60825 505 aa13.83□□□□□ -0.2
PDPN-211ENST00000617617 GMPSP49915 693 aaPredicted RBP13.83□□□□□ -0.2
PDPN-211ENST00000617617 PLCD1P51178 756 aa13.83□□□□□ -0.2
PDPN-211ENST00000617617 SEC23AQ15436 765 aa13.83□□□□□ -0.2
PDPN-211ENST00000617617 PGAP2Q9UHJ9 254 aa13.83□□□□□ -0.2
PDPN-211ENST00000617617 CNTNAP1P78357 1384 aa13.83□□□□□ -0.2
PDPN-211ENST00000617617 CYP2D7A0A087X1C5 515 aa13.82□□□□□ -0.2
PDPN-211ENST00000617617 POLR3DP05423 398 aaPredicted RBP13.82□□□□□ -0.2
PDPN-211ENST00000617617 FAM151AQ8WW52 585 aa13.82□□□□□ -0.2
PDPN-211ENST00000617617 L3MBTL3Q96JM7 780 aaPredicted RBP13.82□□□□□ -0.2
PDPN-211ENST00000617617 LY9Q9HBG7 655 aa13.82□□□□□ -0.2
PDPN-211ENST00000617617 MAP3K10Q02779 954 aa13.82□□□□□ -0.2
PDPN-211ENST00000617617 SART3Q15020 963 aaKnown RBP13.82□□□□□ -0.2
PDPN-211ENST00000617617 ME3Q16798 604 aa13.82□□□□□ -0.2
PDPN-211ENST00000617617 FOXP4Q8IVH2 680 aaPredicted RBP13.82□□□□□ -0.2
PDPN-211ENST00000617617 NKX2-3Q8TAU0 364 aa13.82□□□□□ -0.2
PDPN-211ENST00000617617 LLPHQ9BRT6 129 aaKnown RBP13.82□□□□□ -0.2
PDPN-211ENST00000617617 GPRC5DQ9NZD1 345 aa13.82□□□□□ -0.2
PDPN-211ENST00000617617 TMOD2Q9NZR1 351 aa13.82□□□□□ -0.2
PDPN-211ENST00000617617 PCDHAC2Q9Y5I4 1007 aa13.82□□□□□ -0.2
PDPN-211ENST00000617617 MYH15Q9Y2K3 1946 aa13.82□□□□□ -0.2
PDPN-211ENST00000617617 TBC1D12O60347 775 aa13.82□□□□□ -0.2
PDPN-211ENST00000617617 KDM4AO75164 1064 aa13.82□□□□□ -0.2
PDPN-211ENST00000617617 HLA-DOAP06340 250 aa13.82□□□□□ -0.2
PDPN-211ENST00000617617 PDIA4P13667 645 aaKnown RBP13.82□□□□□ -0.2
PDPN-211ENST00000617617 NFIAQ12857 509 aa13.82□□□□□ -0.2
PDPN-211ENST00000617617 GTF3C6Q969F1 213 aa13.82□□□□□ -0.2
PDPN-211ENST00000617617 PI4KBQ9UBF8 816 aa13.82□□□□□ -0.2
PDPN-211ENST00000617617 WNT10BO00744 389 aa13.81□□□□□ -0.2
PDPN-211ENST00000617617 MYO1BO43795 1136 aa13.81□□□□□ -0.2
PDPN-211ENST00000617617 RBM5P52756 815 aaKnown RBP eCLIP13.81□□□□□ -0.2
PDPN-211ENST00000617617 TDRD3Q9H7E2 651 aaKnown RBP13.81□□□□□ -0.2
PDPN-211ENST00000617617 CNOT7Q9UIV1 285 aaKnown RBP13.81□□□□□ -0.2
PDPN-211ENST00000617617 DOCK1Q14185 1865 aa13.81□□□□□ -0.2
PDPN-211ENST00000617617 PITPNM2Q9BZ72 1349 aa13.81□□□□□ -0.2
PDPN-211ENST00000617617 RASA1P20936 1047 aa13.81□□□□□ -0.2
PDPN-211ENST00000617617 CDK8P49336 464 aa13.81□□□□□ -0.2
PDPN-211ENST00000617617 ST3GAL1Q11201 340 aa13.81□□□□□ -0.2
PDPN-211ENST00000617617 PPP2R5BQ15173 497 aa13.81□□□□□ -0.2
PDPN-211ENST00000617617 TATDN1Q6P1N9 297 aa13.81□□□□□ -0.2
PDPN-211ENST00000617617 MAP3K14Q99558 947 aa13.81□□□□□ -0.2
PDPN-211ENST00000617617 SERPINB13Q9UIV8 391 aa13.81□□□□□ -0.2
PDPN-211ENST00000617617 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.81□□□□□ -0.2
PDPN-211ENST00000617617 SH3BP5LQ7L8J4 393 aa13.8□□□□□ -0.2
PDPN-211ENST00000617617 DGKHQ86XP1 1220 aa13.8□□□□□ -0.2
PDPN-211ENST00000617617 MICALL2Q8IY33 904 aa13.8□□□□□ -0.2
PDPN-211ENST00000617617 NEDD1Q8NHV4 660 aa13.8□□□□□ -0.2
PDPN-211ENST00000617617 BRF1Q92994 677 aa13.8□□□□□ -0.2
PDPN-211ENST00000617617 ZSCAN10Q96SZ4 725 aaPredicted RBP13.8□□□□□ -0.2
PDPN-211ENST00000617617 POLR2AP24928 1970 aaKnown RBP13.8□□□□□ -0.2
PDPN-211ENST00000617617 IGKV6D-41A0A0C4DH26 115 aa13.8□□□□□ -0.2
PDPN-211ENST00000617617 PDIA3P30101 505 aaKnown RBP13.8□□□□□ -0.2
PDPN-211ENST00000617617 PPP4R3BQ5MIZ7 849 aa13.8□□□□□ -0.2
PDPN-211ENST00000617617 IQCA1Q86XH1 822 aa13.8□□□□□ -0.2
PDPN-211ENST00000617617 INCENPQ9NQS7 918 aa13.8□□□□□ -0.2
PDPN-211ENST00000617617 RNF181Q9P0P0 153 aa13.8□□□□□ -0.2
PDPN-211ENST00000617617 SAP30BPQ9UHR5 308 aaKnown RBP13.8□□□□□ -0.2
PDPN-211ENST00000617617 HERC5Q9UII4 1024 aaKnown RBP13.8□□□□□ -0.2
PDPN-211ENST00000617617 SMIM22K7EJ46 135 aa13.79□□□□□ -0.2
PDPN-211ENST00000617617 LARGE1O95461 756 aa13.79□□□□□ -0.2
PDPN-211ENST00000617617 C9orf131Q5VYM1 1079 aa13.79□□□□□ -0.2
PDPN-211ENST00000617617 CCDC17Q96LX7 622 aa13.79□□□□□ -0.2
PDPN-211ENST00000617617 PPP2R3BQ9Y5P8 575 aa13.79□□□□□ -0.2
PDPN-211ENST00000617617 EVX2Q03828 476 aa13.79□□□□□ -0.2
PDPN-211ENST00000617617 TNFAIP1Q13829 316 aa13.79□□□□□ -0.2
PDPN-211ENST00000617617 TMEM67Q5HYA8 995 aa13.79□□□□□ -0.2
PDPN-211ENST00000617617 HPS5Q9UPZ3 1129 aa13.79□□□□□ -0.2
PDPN-211ENST00000617617 H7C1D1 291 aa13.78□□□□□ -0.2
PDPN-211ENST00000617617 SHMT1P34896 483 aa13.78□□□□□ -0.2
PDPN-211ENST00000617617 TNNI2P48788 182 aa13.78□□□□□ -0.2
PDPN-211ENST00000617617 PICALMQ13492 652 aa13.78□□□□□ -0.2
PDPN-211ENST00000617617 SMARCC2Q8TAQ2 1214 aa13.78□□□□□ -0.2
PDPN-211ENST00000617617 TCEANC2Q96MN5 208 aa13.78□□□□□ -0.2
PDPN-211ENST00000617617 BRPF3Q9ULD4 1205 aa13.78□□□□□ -0.2
PDPN-211ENST00000617617 SYNPO2Q9UMS6 1093 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms