RNA–Protein interactions for RNA: ENST00000616887.1

PCDHGA9-202, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA9, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-202ENST00000616887 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.22□□□□□ -0.29
PCDHGA9-202ENST00000616887 RANBP6O60518 1105 aaKnown RBP13.22□□□□□ -0.29
PCDHGA9-202ENST00000616887 SYCP1Q15431 976 aa13.22□□□□□ -0.29
PCDHGA9-202ENST00000616887 ALX1Q15699 326 aa13.22□□□□□ -0.29
PCDHGA9-202ENST00000616887 CCDC82Q8N4S0 544 aa13.22□□□□□ -0.29
PCDHGA9-202ENST00000616887 RIOK1Q9BRS2 568 aaKnown RBP13.22□□□□□ -0.29
PCDHGA9-202ENST00000616887 NYXQ9GZU5 481 aa13.22□□□□□ -0.29
PCDHGA9-202ENST00000616887 FAM217BQ9NTX9 383 aaPredicted RBP13.22□□□□□ -0.29
PCDHGA9-202ENST00000616887 PNPLA7Q6ZV29 1317 aa13.22□□□□□ -0.29
PCDHGA9-202ENST00000616887 IFIT3O14879 490 aaKnown RBP13.22□□□□□ -0.29
PCDHGA9-202ENST00000616887 PRDM1O75626 825 aa13.22□□□□□ -0.29
PCDHGA9-202ENST00000616887 C4BP0C0L5 1744 aa13.22□□□□□ -0.29
PCDHGA9-202ENST00000616887 TRAPPC3LQ5T215 181 aa13.22□□□□□ -0.29
PCDHGA9-202ENST00000616887 RGS22Q8NE09 1264 aa13.22□□□□□ -0.29
PCDHGA9-202ENST00000616887 ST7Q9NRC1 585 aa13.22□□□□□ -0.29
PCDHGA9-202ENST00000616887 ZMYM6O95789 1325 aa13.21□□□□□ -0.29
PCDHGA9-202ENST00000616887 MAGEB6P1A0A0J9YX57 407 aa13.21□□□□□ -0.29
PCDHGA9-202ENST00000616887 PPARAQ07869 468 aa13.21□□□□□ -0.29
PCDHGA9-202ENST00000616887 MFSD6Q6ZSS7 791 aa13.21□□□□□ -0.29
PCDHGA9-202ENST00000616887 FBXO18Q8NFZ0 1043 aa13.21□□□□□ -0.29
PCDHGA9-202ENST00000616887 ERCC4Q92889 916 aaPredicted RBP13.21□□□□□ -0.29
PCDHGA9-202ENST00000616887 CLIC4Q9Y696 253 aa13.21□□□□□ -0.29
PCDHGA9-202ENST00000616887 SMTNL1A8MU46 457 aa13.21□□□□□ -0.3
PCDHGA9-202ENST00000616887 TEX2Q8IWB9 1127 aa13.21□□□□□ -0.3
PCDHGA9-202ENST00000616887 TNMDQ9H2S6 317 aa13.21□□□□□ -0.3
PCDHGA9-202ENST00000616887 GNL3LQ9NVN8 582 aaKnown RBP13.21□□□□□ -0.3
PCDHGA9-202ENST00000616887 CACNA1SQ13698 1873 aa13.21□□□□□ -0.3
PCDHGA9-202ENST00000616887 C4AP0C0L4 1744 aa13.2□□□□□ -0.3
PCDHGA9-202ENST00000616887 COL24A1Q17RW2 1714 aa13.2□□□□□ -0.3
PCDHGA9-202ENST00000616887 WDR19Q8NEZ3 1342 aa13.2□□□□□ -0.3
PCDHGA9-202ENST00000616887 GOLGA8AA7E2F4 631 aa13.2□□□□□ -0.3
PCDHGA9-202ENST00000616887 ZBTB43O43298 467 aa13.2□□□□□ -0.3
PCDHGA9-202ENST00000616887 FBXO33Q7Z6M2 555 aa13.2□□□□□ -0.3
PCDHGA9-202ENST00000616887 SECISBP2LQ93073 1101 aaKnown RBP13.2□□□□□ -0.3
PCDHGA9-202ENST00000616887 AATFQ9NY61 560 aaKnown RBP eCLIP13.2□□□□□ -0.3
PCDHGA9-202ENST00000616887 CFAP45Q9UL16 551 aa13.2□□□□□ -0.3
PCDHGA9-202ENST00000616887 SOCS7O14512 581 aa13.2□□□□□ -0.3
PCDHGA9-202ENST00000616887 PTGS1P23219 599 aa13.2□□□□□ -0.3
PCDHGA9-202ENST00000616887 GUCY1A2P33402 732 aa13.2□□□□□ -0.3
PCDHGA9-202ENST00000616887 MECOMQ03112 1051 aa13.2□□□□□ -0.3
PCDHGA9-202ENST00000616887 NTRK3Q16288 839 aa13.2□□□□□ -0.3
PCDHGA9-202ENST00000616887 MAP3K11Q16584 847 aa13.2□□□□□ -0.3
PCDHGA9-202ENST00000616887 STAG1Q8WVM7 1258 aa13.2□□□□□ -0.3
PCDHGA9-202ENST00000616887 NACAP1Q9BZK3 213 aa13.2□□□□□ -0.3
PCDHGA9-202ENST00000616887 DHX16O60231 1041 aaKnown RBP13.19□□□□□ -0.3
PCDHGA9-202ENST00000616887 TPM3P06753 285 aa13.19□□□□□ -0.3
PCDHGA9-202ENST00000616887 TNNT1P13805 278 aa13.19□□□□□ -0.3
PCDHGA9-202ENST00000616887 HIBADHP31937 336 aaKnown RBP13.19□□□□□ -0.3
PCDHGA9-202ENST00000616887 ME1P48163 572 aa13.19□□□□□ -0.3
PCDHGA9-202ENST00000616887 CNBD1Q8NA66 436 aa13.19□□□□□ -0.3
PCDHGA9-202ENST00000616887 CCDC112Q8NEF3 446 aa13.19□□□□□ -0.3
PCDHGA9-202ENST00000616887 NSUN4Q96CB9 384 aaKnown RBP13.19□□□□□ -0.3
PCDHGA9-202ENST00000616887 TMEM87BQ96K49 555 aa13.19□□□□□ -0.3
PCDHGA9-202ENST00000616887 ALG1Q9BT22 464 aa13.19□□□□□ -0.3
PCDHGA9-202ENST00000616887 FEZ2Q9UHY8 353 aaPredicted RBP13.19□□□□□ -0.3
PCDHGA9-202ENST00000616887 SLC12A7Q9Y666 1083 aa13.19□□□□□ -0.3
PCDHGA9-202ENST00000616887 KIF23Q02241 960 aaPredicted RBP13.19□□□□□ -0.3
PCDHGA9-202ENST00000616887 TYRO3Q06418 890 aa13.19□□□□□ -0.3
PCDHGA9-202ENST00000616887 KMT5BQ4FZB7 885 aa13.19□□□□□ -0.3
PCDHGA9-202ENST00000616887 SGMS1Q86VZ5 419 aa13.19□□□□□ -0.3
PCDHGA9-202ENST00000616887 CCAR1Q8IX12 1150 aaKnown RBP13.19□□□□□ -0.3
PCDHGA9-202ENST00000616887 RCOR1Q9UKL0 485 aa13.19□□□□□ -0.3
PCDHGA9-202ENST00000616887 MRVI1Q9Y6F6 885 aa13.19□□□□□ -0.3
PCDHGA9-202ENST00000616887 GOLGA6L6A8MZA4 724 aa13.18□□□□□ -0.3
PCDHGA9-202ENST00000616887 GNAT2P19087 354 aa13.18□□□□□ -0.3
PCDHGA9-202ENST00000616887 HNRNPH2P55795 449 aaKnown RBP13.18□□□□□ -0.3
PCDHGA9-202ENST00000616887 GRIK5Q16478 980 aa13.18□□□□□ -0.3
PCDHGA9-202ENST00000616887 PRR5LQ6MZQ0 368 aa13.18□□□□□ -0.3
PCDHGA9-202ENST00000616887 LUZP1Q86V48 1076 aa13.18□□□□□ -0.3
PCDHGA9-202ENST00000616887 SLC26A6Q9BXS9 759 aa13.18□□□□□ -0.3
PCDHGA9-202ENST00000616887 CLSTN2Q9H4D0 955 aa13.18□□□□□ -0.3
PCDHGA9-202ENST00000616887 ANKIB1Q9P2G1 1089 aa13.18□□□□□ -0.3
PCDHGA9-202ENST00000616887 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.18□□□□□ -0.3
PCDHGA9-202ENST00000616887 V9GYY5 206 aaPredicted RBP13.18□□□□□ -0.3
PCDHGA9-202ENST00000616887 CCDC69A6NI79 296 aa13.18□□□□□ -0.3
PCDHGA9-202ENST00000616887 CYP2D6P10635 497 aa13.18□□□□□ -0.3
PCDHGA9-202ENST00000616887 NUP133Q8WUM0 1156 aa13.18□□□□□ -0.3
PCDHGA9-202ENST00000616887 PCDHA7Q9UN72 937 aa13.18□□□□□ -0.3
PCDHGA9-202ENST00000616887 TIAM2Q8IVF5 1701 aa13.17□□□□□ -0.3
PCDHGA9-202ENST00000616887 GYS1P13807 737 aa13.17□□□□□ -0.3
PCDHGA9-202ENST00000616887 MYSM1Q5VVJ2 828 aa13.17□□□□□ -0.3
PCDHGA9-202ENST00000616887 KRT40Q6A162 431 aa13.17□□□□□ -0.3
PCDHGA9-202ENST00000616887 ZNF592Q92610 1267 aa13.17□□□□□ -0.3
PCDHGA9-202ENST00000616887 TSPYL1Q9H0U9 437 aa13.17□□□□□ -0.3
PCDHGA9-202ENST00000616887 IRS2Q9Y4H2 1338 aa13.17□□□□□ -0.3
PCDHGA9-202ENST00000616887 BAZ2AQ9UIF9 1905 aaKnown RBP13.17□□□□□ -0.3
PCDHGA9-202ENST00000616887 A0A1B0GVL5 298 aa13.17□□□□□ -0.3
PCDHGA9-202ENST00000616887 CCDC192P0DO97 292 aa13.17□□□□□ -0.3
PCDHGA9-202ENST00000616887 TNNT3P45378 269 aaPredicted RBP13.17□□□□□ -0.3
PCDHGA9-202ENST00000616887 LRMPQ12912 555 aa13.17□□□□□ -0.3
PCDHGA9-202ENST00000616887 SNW1Q13573 536 aaKnown RBP13.17□□□□□ -0.3
PCDHGA9-202ENST00000616887 ANO6Q4KMQ2 910 aa13.17□□□□□ -0.3
PCDHGA9-202ENST00000616887 CHMP4CQ96CF2 233 aa13.17□□□□□ -0.3
PCDHGA9-202ENST00000616887 KRT23Q9C075 422 aa13.17□□□□□ -0.3
PCDHGA9-202ENST00000616887 DDX19AQ9NUU7 478 aaKnown RBP13.17□□□□□ -0.3
PCDHGA9-202ENST00000616887 hCG_1642624A0A1W2PR95 340 aa13.16□□□□□ -0.3
PCDHGA9-202ENST00000616887 USP17L12C9JPN9 530 aa13.16□□□□□ -0.3
PCDHGA9-202ENST00000616887 USP17L21D6R901 530 aa13.16□□□□□ -0.3
PCDHGA9-202ENST00000616887 NMT2O60551 498 aa13.16□□□□□ -0.3
PCDHGA9-202ENST00000616887 LIFRP42702 1097 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms