RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 CAGE1Q8TC20 777 aa6.4□□□□□ -1.38
SYNCRIP-204ENST00000616122 IL17RAQ96F46 866 aa6.4□□□□□ -1.38
SYNCRIP-204ENST00000616122 FUCA2Q9BTY2 467 aa6.4□□□□□ -1.38
SYNCRIP-204ENST00000616122 RNF26Q9BY78 433 aaPredicted RBP6.4□□□□□ -1.38
SYNCRIP-204ENST00000616122 ZC3H12CQ9C0D7 883 aaKnown RBP6.4□□□□□ -1.38
SYNCRIP-204ENST00000616122 TMX1Q9H3N1 280 aa6.4□□□□□ -1.38
SYNCRIP-204ENST00000616122 RNF216Q9NWF9 866 aaPredicted RBP6.4□□□□□ -1.38
SYNCRIP-204ENST00000616122 UBAP1LF5GYI3 381 aa6.4□□□□□ -1.38
SYNCRIP-204ENST00000616122 SH2B2O14492 632 aaPredicted RBP6.4□□□□□ -1.38
SYNCRIP-204ENST00000616122 CYP19A1P11511 503 aaPredicted RBP6.4□□□□□ -1.38
SYNCRIP-204ENST00000616122 U2AF2P26368 475 aaKnown RBP eCLIP6.4□□□□□ -1.385e-7■■■□□ 17.1
SYNCRIP-204ENST00000616122 MCM7P33993 719 aa6.4□□□□□ -1.38
SYNCRIP-204ENST00000616122 JAKMIP3Q5VZ66 844 aa6.4□□□□□ -1.38
SYNCRIP-204ENST00000616122 SPECC1LQ69YQ0 1117 aa6.4□□□□□ -1.38
SYNCRIP-204ENST00000616122 RPGRQ92834 1020 aaKnown RBP6.4□□□□□ -1.38
SYNCRIP-204ENST00000616122 ACBD3Q9H3P7 528 aa6.4□□□□□ -1.38
SYNCRIP-204ENST00000616122 ARFGAP3Q9NP61 516 aa6.4□□□□□ -1.38
SYNCRIP-204ENST00000616122 ZHX1Q9UKY1 873 aaPredicted RBP6.4□□□□□ -1.38
SYNCRIP-204ENST00000616122 ZMYM6O95789 1325 aa6.4□□□□□ -1.38
SYNCRIP-204ENST00000616122 SETD1BQ9UPS6 1966 aaKnown RBP6.4□□□□□ -1.39
SYNCRIP-204ENST00000616122 PIK3AP1Q6ZUJ8 805 aa6.4□□□□□ -1.39
SYNCRIP-204ENST00000616122 IGSF22Q8N9C0 903 aa6.4□□□□□ -1.39
SYNCRIP-204ENST00000616122 EEF2KMTQ96G04 330 aa6.4□□□□□ -1.39
SYNCRIP-204ENST00000616122 ANKRD2Q9GZV1 360 aa6.4□□□□□ -1.39
SYNCRIP-204ENST00000616122 LUC7L2Q9Y383 392 aaKnown RBP6.4□□□□□ -1.39
SYNCRIP-204ENST00000616122 RTL9Q8NET4 1388 aa6.4□□□□□ -1.39
SYNCRIP-204ENST00000616122 CTDNEP1O95476 244 aa6.4□□□□□ -1.39
SYNCRIP-204ENST00000616122 PTPREP23469 700 aa6.4□□□□□ -1.39
SYNCRIP-204ENST00000616122 NKX1-1Q15270 411 aaPredicted RBP6.4□□□□□ -1.39
SYNCRIP-204ENST00000616122 FAM98CQ17RN3 349 aaKnown RBP6.4□□□□□ -1.39
SYNCRIP-204ENST00000616122 SARM1Q6SZW1 724 aa6.4□□□□□ -1.39
SYNCRIP-204ENST00000616122 DTHD1Q6ZMT9 781 aa6.4□□□□□ -1.39
SYNCRIP-204ENST00000616122 FERMT2Q96AC1 680 aa6.4□□□□□ -1.39
SYNCRIP-204ENST00000616122 AK7Q96M32 723 aa6.4□□□□□ -1.39
SYNCRIP-204ENST00000616122 CTAGE1Q96RT6 745 aa6.4□□□□□ -1.39
SYNCRIP-204ENST00000616122 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.4□□□□□ -1.39
SYNCRIP-204ENST00000616122 NRKQ7Z2Y5 1582 aa6.4□□□□□ -1.39
SYNCRIP-204ENST00000616122 IKBKBO14920 756 aa6.39□□□□□ -1.39
SYNCRIP-204ENST00000616122 STAT6P42226 847 aa6.39□□□□□ -1.39
SYNCRIP-204ENST00000616122 ANTXR2P58335 489 aa6.39□□□□□ -1.39
SYNCRIP-204ENST00000616122 KARSQ15046 597 aaKnown RBP6.39□□□□□ -1.39
SYNCRIP-204ENST00000616122 HEATR3Q7Z4Q2 680 aa6.39□□□□□ -1.39
SYNCRIP-204ENST00000616122 ENGASEQ8NFI3 743 aa6.39□□□□□ -1.39
SYNCRIP-204ENST00000616122 AGXT2Q9BYV1 514 aa6.39□□□□□ -1.39
SYNCRIP-204ENST00000616122 CYP2D7A0A087X1C5 515 aa6.39□□□□□ -1.39
SYNCRIP-204ENST00000616122 CCDC66A2RUB6 948 aa6.39□□□□□ -1.39
SYNCRIP-204ENST00000616122 NAPAP54920 295 aa6.39□□□□□ -1.39
SYNCRIP-204ENST00000616122 ASIC1P78348 528 aa6.39□□□□□ -1.39
SYNCRIP-204ENST00000616122 LONRF3Q496Y0 759 aa6.39□□□□□ -1.39
SYNCRIP-204ENST00000616122 FAM47AQ5JRC9 791 aa6.39□□□□□ -1.39
SYNCRIP-204ENST00000616122 PLIN2Q99541 437 aa6.39□□□□□ -1.39
SYNCRIP-204ENST00000616122 CLSTN1O94985 981 aa6.39□□□□□ -1.39
SYNCRIP-204ENST00000616122 KRT2P35908 639 aa6.39□□□□□ -1.39
SYNCRIP-204ENST00000616122 NAA30Q147X3 362 aaPredicted RBP6.39□□□□□ -1.39
SYNCRIP-204ENST00000616122 ELF2Q15723 593 aa6.39□□□□□ -1.39
SYNCRIP-204ENST00000616122 PNMA1Q8ND90 353 aa6.39□□□□□ -1.39
SYNCRIP-204ENST00000616122 TIGD1Q96MW7 591 aa6.39□□□□□ -1.39
SYNCRIP-204ENST00000616122 CARD6Q9BX69 1037 aa6.39□□□□□ -1.39
SYNCRIP-204ENST00000616122 CCNL1Q9UK58 526 aaPredicted RBP6.39□□□□□ -1.39
SYNCRIP-204ENST00000616122 CDHR2Q9BYE9 1310 aa6.39□□□□□ -1.39
SYNCRIP-204ENST00000616122 GNA11P29992 359 aa6.39□□□□□ -1.39
SYNCRIP-204ENST00000616122 CDC25AP30304 524 aa6.39□□□□□ -1.39
SYNCRIP-204ENST00000616122 TNNT3P45378 269 aaPredicted RBP6.39□□□□□ -1.39
SYNCRIP-204ENST00000616122 AXDND1Q5T1B0 1012 aaPredicted RBP6.39□□□□□ -1.39
SYNCRIP-204ENST00000616122 CNGA4Q8IV77 575 aa6.39□□□□□ -1.39
SYNCRIP-204ENST00000616122 CRACR2BQ8N4Y2 399 aaPredicted RBP6.39□□□□□ -1.39
SYNCRIP-204ENST00000616122 ZNF397Q8NF99 534 aaPredicted RBP6.39□□□□□ -1.39
SYNCRIP-204ENST00000616122 VPS16Q9H269 839 aa6.39□□□□□ -1.39
SYNCRIP-204ENST00000616122 LUC7LQ9NQ29 371 aaKnown RBP6.39□□□□□ -1.39
SYNCRIP-204ENST00000616122 SLFN14P0C7P3 912 aa6.39□□□□□ -1.39
SYNCRIP-204ENST00000616122 PTGDRQ13258 359 aa6.39□□□□□ -1.39
SYNCRIP-204ENST00000616122 ALX1Q15699 326 aa6.39□□□□□ -1.39
SYNCRIP-204ENST00000616122 FKBP15Q5T1M5 1219 aa6.39□□□□□ -1.39
SYNCRIP-204ENST00000616122 KIAA1328Q86T90 577 aa6.39□□□□□ -1.39
SYNCRIP-204ENST00000616122 PKNOX2Q96KN3 472 aa6.39□□□□□ -1.39
SYNCRIP-204ENST00000616122 MTA3Q9BTC8 594 aa6.39□□□□□ -1.39
SYNCRIP-204ENST00000616122 RMND1Q9NWS8 449 aa6.39□□□□□ -1.39
SYNCRIP-204ENST00000616122 GSG1L2A8MUP6 293 aa6.39□□□□□ -1.39
SYNCRIP-204ENST00000616122 POLR3GO15318 223 aaPredicted RBP6.39□□□□□ -1.39
SYNCRIP-204ENST00000616122 CDC27P30260 824 aa6.39□□□□□ -1.39
SYNCRIP-204ENST00000616122 CCDC96Q2M329 555 aa6.39□□□□□ -1.39
SYNCRIP-204ENST00000616122 LETM2Q2VYF4 491 aa6.39□□□□□ -1.39
SYNCRIP-204ENST00000616122 CCDC178Q5BJE1 867 aa6.39□□□□□ -1.39
SYNCRIP-204ENST00000616122 SLF2Q8IX21 1173 aa6.39□□□□□ -1.39
SYNCRIP-204ENST00000616122 CNBD1Q8NA66 436 aa6.39□□□□□ -1.39
SYNCRIP-204ENST00000616122 WDR66Q8TBY9 1149 aa6.39□□□□□ -1.39
SYNCRIP-204ENST00000616122 NYXQ9GZU5 481 aa6.39□□□□□ -1.39
SYNCRIP-204ENST00000616122 ERCC5P28715 1186 aaPredicted RBP6.38□□□□□ -1.39
SYNCRIP-204ENST00000616122 RBM5P52756 815 aaKnown RBP eCLIP6.38□□□□□ -1.39
SYNCRIP-204ENST00000616122 MCM6Q14566 821 aa6.38□□□□□ -1.39
SYNCRIP-204ENST00000616122 TMEM266Q2M3C6 531 aa6.38□□□□□ -1.39
SYNCRIP-204ENST00000616122 TEX11Q8IYF3 940 aa6.38□□□□□ -1.39
SYNCRIP-204ENST00000616122 SPTLC3Q9NUV7 552 aa6.38□□□□□ -1.39
SYNCRIP-204ENST00000616122 USP32Q8NFA0 1604 aa6.38□□□□□ -1.39
SYNCRIP-204ENST00000616122 CCT6AP40227 531 aaKnown RBP6.38□□□□□ -1.39
SYNCRIP-204ENST00000616122 EPS15P42566 896 aa6.38□□□□□ -1.39
SYNCRIP-204ENST00000616122 TNNI2P48788 182 aa6.38□□□□□ -1.39
SYNCRIP-204ENST00000616122 EVCP57679 992 aa6.38□□□□□ -1.39
SYNCRIP-204ENST00000616122 AMPD3Q01432 767 aa6.38□□□□□ -1.39
SYNCRIP-204ENST00000616122 TBC1D8BQ0IIM8 1120 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms