RNA–Protein interactions for RNA: ENST00000614971.4

LTN1-207, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,756 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-207ENST00000614971 NBPF10Q6P3W6 841 aaKnown RBP4.31□□□□□ -1.72
LTN1-207ENST00000614971 USP17L1Q7RTZ2 530 aa4.31□□□□□ -1.72
LTN1-207ENST00000614971 NBPF15Q8N660 670 aa4.31□□□□□ -1.72
LTN1-207ENST00000614971 C6orf50Q9HD87 102 aa4.31□□□□□ -1.72
LTN1-207ENST00000614971 RRAGDQ9NQL2 400 aaPredicted RBP4.31□□□□□ -1.72
LTN1-207ENST00000614971 UBN2Q6ZU65 1347 aa4.31□□□□□ -1.72
LTN1-207ENST00000614971 KDRP35968 1356 aa4.31□□□□□ -1.72
LTN1-207ENST00000614971 PREX2Q70Z35 1606 aa4.31□□□□□ -1.72
LTN1-207ENST00000614971 MAST3O60307 1309 aa4.31□□□□□ -1.72
LTN1-207ENST00000614971 C21orf2O43822 256 aa4.31□□□□□ -1.72
LTN1-207ENST00000614971 ZNF853P0CG23 659 aa4.31□□□□□ -1.72
LTN1-207ENST00000614971 CASQ1P31415 396 aa4.31□□□□□ -1.72
LTN1-207ENST00000614971 BTDP43251 543 aa4.31□□□□□ -1.72
LTN1-207ENST00000614971 DNAJC21Q5F1R6 531 aaKnown RBP4.31□□□□□ -1.72
LTN1-207ENST00000614971 TMTC2Q8N394 836 aa4.31□□□□□ -1.72
LTN1-207ENST00000614971 LMBRD1Q9NUN5 540 aa4.31□□□□□ -1.72
LTN1-207ENST00000614971 KCNH3Q9ULD8 1083 aa4.31□□□□□ -1.72
LTN1-207ENST00000614971 MRVI1Q9Y6F6 885 aa4.31□□□□□ -1.72
LTN1-207ENST00000614971 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.31□□□□□ -1.72
LTN1-207ENST00000614971 KDM5DQ9BY66 1539 aa4.31□□□□□ -1.72
LTN1-207ENST00000614971 ZNF804BA4D1E1 1349 aa4.3□□□□□ -1.72
LTN1-207ENST00000614971 A0A0G2JLW4 131 aa4.3□□□□□ -1.72
LTN1-207ENST00000614971 ZNF202O95125 648 aa4.3□□□□□ -1.72
LTN1-207ENST00000614971 HOXB7P09629 217 aa4.3□□□□□ -1.72
LTN1-207ENST00000614971 MCM6Q14566 821 aa4.3□□□□□ -1.72
LTN1-207ENST00000614971 EEPD1Q7L9B9 569 aa4.3□□□□□ -1.72
LTN1-207ENST00000614971 TTC6Q86TZ1 520 aa4.3□□□□□ -1.72
LTN1-207ENST00000614971 RABEP2Q9H5N1 569 aa4.3□□□□□ -1.72
LTN1-207ENST00000614971 PIH1D3Q9NQM4 214 aaKnown RBP4.3□□□□□ -1.72
LTN1-207ENST00000614971 CLIC4Q9Y696 253 aa4.3□□□□□ -1.72
LTN1-207ENST00000614971 ABCC3O15438 1527 aa4.3□□□□□ -1.72
LTN1-207ENST00000614971 ARID4AP29374 1257 aaPredicted RBP4.3□□□□□ -1.72
LTN1-207ENST00000614971 CASP1P29466 404 aa4.3□□□□□ -1.72
LTN1-207ENST00000614971 NOLC1Q14978 699 aaKnown RBP eCLIP4.3□□□□□ -1.72
LTN1-207ENST00000614971 GPR162Q16538 588 aa4.3□□□□□ -1.72
LTN1-207ENST00000614971 KRT79Q5XKE5 535 aa4.3□□□□□ -1.72
LTN1-207ENST00000614971 USP17L2Q6R6M4 530 aa4.3□□□□□ -1.72
LTN1-207ENST00000614971 CLEC10AQ8IUN9 316 aa4.3□□□□□ -1.72
LTN1-207ENST00000614971 KRI1Q8N9T8 703 aaKnown RBP4.3□□□□□ -1.72
LTN1-207ENST00000614971 GDAP1L1Q96MZ0 367 aa4.3□□□□□ -1.72
LTN1-207ENST00000614971 PPP1R9BQ96SB3 815 aa4.3□□□□□ -1.72
LTN1-207ENST00000614971 THRAP3Q9Y2W1 955 aaKnown RBP4.3□□□□□ -1.72
LTN1-207ENST00000614971 ARHGEF5Q12774 1597 aa4.3□□□□□ -1.72
LTN1-207ENST00000614971 H0YHG0 523 aa4.3□□□□□ -1.72
LTN1-207ENST00000614971 TRAF5O00463 557 aa4.3□□□□□ -1.72
LTN1-207ENST00000614971 MCAMP43121 646 aa4.3□□□□□ -1.72
LTN1-207ENST00000614971 SYT10Q6XYQ8 523 aa4.3□□□□□ -1.72
LTN1-207ENST00000614971 TTLL11Q8NHH1 800 aa4.3□□□□□ -1.72
LTN1-207ENST00000614971 GPT2Q8TD30 523 aa4.3□□□□□ -1.72
LTN1-207ENST00000614971 TAF4BQ92750 862 aa4.3□□□□□ -1.72
LTN1-207ENST00000614971 HAUS7Q99871 368 aa4.3□□□□□ -1.72
LTN1-207ENST00000614971 CNTRLQ7Z7A1 2325 aa4.3□□□□□ -1.72
LTN1-207ENST00000614971 PCCAP05165 728 aaPredicted RBP4.3□□□□□ -1.72
LTN1-207ENST00000614971 TECP42680 631 aa4.3□□□□□ -1.72
LTN1-207ENST00000614971 DLGAP5Q15398 846 aa4.3□□□□□ -1.72
LTN1-207ENST00000614971 TBC1D9BQ66K14 1250 aa4.3□□□□□ -1.72
LTN1-207ENST00000614971 PNMA1Q8ND90 353 aa4.3□□□□□ -1.72
LTN1-207ENST00000614971 MXD3Q9BW11 206 aa4.3□□□□□ -1.72
LTN1-207ENST00000614971 LSG1Q9H089 658 aaKnown RBP4.3□□□□□ -1.72
LTN1-207ENST00000614971 A2ML1A8K2U0 1454 aa4.3□□□□□ -1.72
LTN1-207ENST00000614971 FAM135BQ49AJ0 1406 aa4.3□□□□□ -1.72
LTN1-207ENST00000614971 SMIM23A6NLE4 172 aa4.3□□□□□ -1.72
LTN1-207ENST00000614971 CCDC169A6NNP5 214 aa4.3□□□□□ -1.72
LTN1-207ENST00000614971 CTAGE5O15320 804 aa4.3□□□□□ -1.72
LTN1-207ENST00000614971 YEATS4O95619 227 aa4.3□□□□□ -1.72
LTN1-207ENST00000614971 GNAT2P19087 354 aa4.3□□□□□ -1.72
LTN1-207ENST00000614971 CALML3P27482 149 aa4.3□□□□□ -1.72
LTN1-207ENST00000614971 CRACR2AQ9BSW2 395 aa4.3□□□□□ -1.72
LTN1-207ENST00000614971 RTEL1Q9NZ71 1219 aa4.3□□□□□ -1.72
LTN1-207ENST00000614971 TAF6LQ9Y6J9 622 aa4.3□□□□□ -1.72
LTN1-207ENST00000614971 SPATA31A3Q5VYP0 1347 aa4.3□□□□□ -1.72
LTN1-207ENST00000614971 GSTTP1A0A1W2PQM5 241 aa4.3□□□□□ -1.72
LTN1-207ENST00000614971 RHOXF2BP0C7M4 288 aa4.3□□□□□ -1.72
LTN1-207ENST00000614971 KRT27Q7Z3Y8 459 aa4.3□□□□□ -1.72
LTN1-207ENST00000614971 RHOXF2Q9BQY4 288 aa4.3□□□□□ -1.72
LTN1-207ENST00000614971 CBX8Q9HC52 389 aa4.3□□□□□ -1.72
LTN1-207ENST00000614971 TAB2Q9NYJ8 693 aa4.3□□□□□ -1.72
LTN1-207ENST00000614971 ZHX1Q9UKY1 873 aaPredicted RBP4.3□□□□□ -1.72
LTN1-207ENST00000614971 EN1Q05925 392 aaPredicted RBP4.29□□□□□ -1.72
LTN1-207ENST00000614971 PDE4DQ08499 809 aa4.29□□□□□ -1.72
LTN1-207ENST00000614971 CCDC148Q8NFR7 591 aa4.29□□□□□ -1.72
LTN1-207ENST00000614971 WDR66Q8TBY9 1149 aa4.29□□□□□ -1.72
LTN1-207ENST00000614971 MTMR6Q9Y217 621 aa4.29□□□□□ -1.72
LTN1-207ENST00000614971 HECW2Q9P2P5 1572 aa4.29□□□□□ -1.72
LTN1-207ENST00000614971 PSMA7O14818 248 aa4.29□□□□□ -1.72
LTN1-207ENST00000614971 ALAS1P13196 640 aa4.29□□□□□ -1.72
LTN1-207ENST00000614971 ADKP55263 362 aaKnown RBP4.29□□□□□ -1.72
LTN1-207ENST00000614971 TTC38Q5R3I4 469 aa4.29□□□□□ -1.72
LTN1-207ENST00000614971 GTF3C6Q969F1 213 aa4.29□□□□□ -1.72
LTN1-207ENST00000614971 COA7Q96BR5 231 aa4.29□□□□□ -1.72
LTN1-207ENST00000614971 PPP1R16BQ96T49 567 aa4.29□□□□□ -1.72
LTN1-207ENST00000614971 IL25Q9H293 177 aa4.29□□□□□ -1.72
LTN1-207ENST00000614971 ZSWIM5Q9P217 1185 aa4.29□□□□□ -1.72
LTN1-207ENST00000614971 SERTAD1Q9UHV2 236 aa4.29□□□□□ -1.72
LTN1-207ENST00000614971 PALLDQ8WX93 1383 aa4.29□□□□□ -1.72
LTN1-207ENST00000614971 AFF2P51816 1311 aa4.29□□□□□ -1.72
LTN1-207ENST00000614971 MROH5Q6ZUA9 1318 aa4.29□□□□□ -1.72
LTN1-207ENST00000614971 KLRF2D3W0D1 207 aa4.29□□□□□ -1.72
LTN1-207ENST00000614971 PPP4R3BQ5MIZ7 849 aa4.29□□□□□ -1.72
LTN1-207ENST00000614971 PRAMEF18Q5VWM3 479 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms