RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 CYP21A2P08686 494 aa9.59□□□□□ -0.87
PCDH9-205ENST00000614931 RBM5P52756 815 aaKnown RBP eCLIP9.59□□□□□ -0.87
PCDH9-205ENST00000614931 HAND2P61296 217 aa9.59□□□□□ -0.87
PCDH9-205ENST00000614931 TTLL12Q14166 644 aaPredicted RBP9.59□□□□□ -0.87
PCDH9-205ENST00000614931 ALX1Q15699 326 aa9.59□□□□□ -0.87
PCDH9-205ENST00000614931 SPDYE2Q495Y8 402 aa9.59□□□□□ -0.87
PCDH9-205ENST00000614931 LDLRAD1Q5T700 205 aa9.59□□□□□ -0.87
PCDH9-205ENST00000614931 STOX1Q6ZVD7 989 aa9.59□□□□□ -0.87
PCDH9-205ENST00000614931 SLF2Q8IX21 1173 aa9.59□□□□□ -0.87
PCDH9-205ENST00000614931 TEX11Q8IYF3 940 aa9.59□□□□□ -0.87
PCDH9-205ENST00000614931 IFNL3Q8IZI9 196 aa9.59□□□□□ -0.87
PCDH9-205ENST00000614931 NKX2-3Q8TAU0 364 aa9.59□□□□□ -0.87
PCDH9-205ENST00000614931 IL17RAQ96F46 866 aa9.59□□□□□ -0.87
PCDH9-205ENST00000614931 CSRNP1Q96S65 589 aa9.59□□□□□ -0.87
PCDH9-205ENST00000614931 MRIQ9BWK5 157 aa9.59□□□□□ -0.87
PCDH9-205ENST00000614931 CRNKL1Q9BZJ0 848 aaKnown RBP9.59□□□□□ -0.87
PCDH9-205ENST00000614931 DCP1AQ9NPI6 582 aaPredicted RBP9.59□□□□□ -0.87
PCDH9-205ENST00000614931 SAGE1Q9NXZ1 904 aa9.59□□□□□ -0.87
PCDH9-205ENST00000614931 ZNF70Q9UC06 446 aaPredicted RBP9.59□□□□□ -0.87
PCDH9-205ENST00000614931 TSKSQ9UJT2 592 aa9.59□□□□□ -0.87
PCDH9-205ENST00000614931 RBM19Q9Y4C8 960 aaKnown RBP9.59□□□□□ -0.87
PCDH9-205ENST00000614931 U3KPZ7 1027 aaPredicted RBP9.59□□□□□ -0.87
PCDH9-205ENST00000614931 SSC5DA1L4H1 1573 aa9.58□□□□□ -0.88
PCDH9-205ENST00000614931 FLT1P17948 1338 aa9.58□□□□□ -0.88
PCDH9-205ENST00000614931 CYP2D6P10635 497 aa9.58□□□□□ -0.88
PCDH9-205ENST00000614931 GNAT2P19087 354 aa9.58□□□□□ -0.88
PCDH9-205ENST00000614931 CACNB3P54284 484 aa9.58□□□□□ -0.88
PCDH9-205ENST00000614931 NFIAQ12857 509 aa9.58□□□□□ -0.88
PCDH9-205ENST00000614931 MAP3K11Q16584 847 aa9.58□□□□□ -0.88
PCDH9-205ENST00000614931 ADCK5Q3MIX3 580 aa9.58□□□□□ -0.88
PCDH9-205ENST00000614931 ARMC9Q7Z3E5 817 aa9.58□□□□□ -0.88
PCDH9-205ENST00000614931 TBC1D10CQ8IV04 446 aa9.58□□□□□ -0.88
PCDH9-205ENST00000614931 MAPKAPK5Q8IW41 473 aa9.58□□□□□ -0.88
PCDH9-205ENST00000614931 TGFBRAP1Q8WUH2 860 aa9.58□□□□□ -0.88
PCDH9-205ENST00000614931 TDRD3Q9H7E2 651 aaKnown RBP9.58□□□□□ -0.88
PCDH9-205ENST00000614931 UPF2Q9HAU5 1272 aaKnown RBP9.58□□□□□ -0.88
PCDH9-205ENST00000614931 USP40Q9NVE5 1235 aa9.58□□□□□ -0.88
PCDH9-205ENST00000614931 GREB1LQ9C091 1923 aaPredicted RBP9.57□□□□□ -0.88
PCDH9-205ENST00000614931 UNCXA6NJT0 531 aa9.57□□□□□ -0.88
PCDH9-205ENST00000614931 EIF5BO60841 1220 aaKnown RBP9.57□□□□□ -0.88
PCDH9-205ENST00000614931 BAG3O95817 575 aa9.57□□□□□ -0.88
PCDH9-205ENST00000614931 APPP05067 770 aa9.57□□□□□ -0.88
PCDH9-205ENST00000614931 CPA1P15085 419 aa9.57□□□□□ -0.88
PCDH9-205ENST00000614931 CTDSPL2Q05D32 466 aa9.57□□□□□ -0.88
PCDH9-205ENST00000614931 TNFAIP1Q13829 316 aa9.57□□□□□ -0.88
PCDH9-205ENST00000614931 PRKG1Q13976 671 aa9.57□□□□□ -0.88
PCDH9-205ENST00000614931 RASA3Q14644 834 aa9.57□□□□□ -0.88
PCDH9-205ENST00000614931 SLC4A8Q2Y0W8 1093 aa9.57□□□□□ -0.88
PCDH9-205ENST00000614931 SUPT20HL1Q3ZLR7 823 aa9.57□□□□□ -0.88
PCDH9-205ENST00000614931 CTR9Q6PD62 1173 aa9.57□□□□□ -0.88
PCDH9-205ENST00000614931 ZFPM1Q8IX07 1006 aa9.57□□□□□ -0.88
PCDH9-205ENST00000614931 NOL10Q9BSC4 688 aaKnown RBP9.57□□□□□ -0.88
PCDH9-205ENST00000614931 NAPBQ9H115 298 aa9.57□□□□□ -0.88
PCDH9-205ENST00000614931 VEZTQ9HBM0 779 aa9.57□□□□□ -0.88
PCDH9-205ENST00000614931 RNF186Q9NXI6 227 aa9.57□□□□□ -0.88
PCDH9-205ENST00000614931 FAM198AQ9UFP1 575 aa9.57□□□□□ -0.88
PCDH9-205ENST00000614931 ANGEL1Q9UNK9 670 aaKnown RBP9.57□□□□□ -0.88
PCDH9-205ENST00000614931 ATAD5Q96QE3 1844 aa9.56□□□□□ -0.88
PCDH9-205ENST00000614931 USP17L12C9JPN9 530 aa9.56□□□□□ -0.88
PCDH9-205ENST00000614931 USP17L21D6R901 530 aa9.56□□□□□ -0.88
PCDH9-205ENST00000614931 PPP1R12BO60237 982 aaPredicted RBP9.56□□□□□ -0.88
PCDH9-205ENST00000614931 TRPA1O75762 1119 aa9.56□□□□□ -0.88
PCDH9-205ENST00000614931 CAPN15O75808 1086 aa9.56□□□□□ -0.88
PCDH9-205ENST00000614931 SLURP2P0DP57 97 aa9.56□□□□□ -0.88
PCDH9-205ENST00000614931 PLCG2P16885 1265 aa9.56□□□□□ -0.88
PCDH9-205ENST00000614931 USP5P45974 858 aa9.56□□□□□ -0.88
PCDH9-205ENST00000614931 TM4SF4P48230 202 aa9.56□□□□□ -0.88
PCDH9-205ENST00000614931 TDO2P48775 406 aa9.56□□□□□ -0.88
PCDH9-205ENST00000614931 ANAPC15P60006 121 aa9.56□□□□□ -0.88
PCDH9-205ENST00000614931 PICALMQ13492 652 aa9.56□□□□□ -0.88
PCDH9-205ENST00000614931 TSGA10IPQ3SY00 556 aa9.56□□□□□ -0.88
PCDH9-205ENST00000614931 NBPF12Q5TAG4 269 aaPredicted RBP9.56□□□□□ -0.88
PCDH9-205ENST00000614931 GIMAP6Q6P9H5 292 aa9.56□□□□□ -0.88
PCDH9-205ENST00000614931 TEPSINQ96N21 525 aa9.56□□□□□ -0.88
PCDH9-205ENST00000614931 INCENPQ9NQS7 918 aa9.56□□□□□ -0.88
PCDH9-205ENST00000614931 ATP8A2Q9NTI2 1148 aa9.56□□□□□ -0.88
PCDH9-205ENST00000614931 SAP30BPQ9UHR5 308 aaKnown RBP9.56□□□□□ -0.88
PCDH9-205ENST00000614931 FZD1Q9UP38 647 aa9.56□□□□□ -0.88
PCDH9-205ENST00000614931 NEDD4P46934 1319 aa9.56□□□□□ -0.88
PCDH9-205ENST00000614931 ROBO3Q96MS0 1386 aa9.55□□□□□ -0.88
PCDH9-205ENST00000614931 E7EWF7 191 aa9.55□□□□□ -0.88
PCDH9-205ENST00000614931 USP2O75604 605 aaPredicted RBP9.55□□□□□ -0.88
PCDH9-205ENST00000614931 CD2BP2O95400 341 aaKnown RBP9.55□□□□□ -0.88
PCDH9-205ENST00000614931 MCCP23508 829 aa9.55□□□□□ -0.88
PCDH9-205ENST00000614931 PPARAQ07869 468 aa9.55□□□□□ -0.88
PCDH9-205ENST00000614931 SBK1Q52WX2 424 aa9.55□□□□□ -0.88
PCDH9-205ENST00000614931 C12orf60Q5U649 245 aa9.55□□□□□ -0.88
PCDH9-205ENST00000614931 SPRYD7Q5W111 196 aa9.55□□□□□ -0.88
PCDH9-205ENST00000614931 SH3BP5LQ7L8J4 393 aa9.55□□□□□ -0.88
PCDH9-205ENST00000614931 CERS3Q8IU89 383 aa9.55□□□□□ -0.88
PCDH9-205ENST00000614931 SLC10A4Q96EP9 437 aa9.55□□□□□ -0.88
PCDH9-205ENST00000614931 JAKMIP1Q96N16 626 aaKnown RBP9.55□□□□□ -0.88
PCDH9-205ENST00000614931 IDI2Q9BXS1 227 aa9.55□□□□□ -0.88
PCDH9-205ENST00000614931 UPF3BQ9BZI7 483 aaKnown RBP9.55□□□□□ -0.88
PCDH9-205ENST00000614931 OSBPL5Q9H0X9 879 aaPredicted RBP9.55□□□□□ -0.88
PCDH9-205ENST00000614931 MCM9Q9NXL9 1143 aa9.55□□□□□ -0.88
PCDH9-205ENST00000614931 CTNNA3Q9UI47 895 aa9.55□□□□□ -0.88
PCDH9-205ENST00000614931 ANAPC4Q9UJX5 808 aa9.55□□□□□ -0.88
PCDH9-205ENST00000614931 CASP8AP2Q9UKL3 1982 aa9.55□□□□□ -0.88
PCDH9-205ENST00000614931 COL2A1P02458 1487 aaPredicted RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms