RNA–Protein interactions for RNA: ENST00000613988.4

CBWD1-223, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-223ENST00000613988 PRMT2P55345 433 aa26.56■■□□□ 1.84
CBWD1-223ENST00000613988 EAF2Q96CJ1 260 aaPredicted RBP26.56■■□□□ 1.84
CBWD1-223ENST00000613988 TRIM75PA6NK02 468 aa26.55■■□□□ 1.84
CBWD1-223ENST00000613988 FMNL1O95466 1100 aaPredicted RBP26.55■■□□□ 1.84
CBWD1-223ENST00000613988 PLCG2P16885 1265 aa26.55■■□□□ 1.84
CBWD1-223ENST00000613988 ZAP70P43403 619 aa26.55■■□□□ 1.84
CBWD1-223ENST00000613988 PRPF38BQ5VTL8 546 aaKnown RBP26.55■■□□□ 1.84
CBWD1-223ENST00000613988 TLR7Q9NYK1 1049 aaKnown RBP26.55■■□□□ 1.84
CBWD1-223ENST00000613988 FRMD4AQ9P2Q2 1039 aaPredicted RBP26.55■■□□□ 1.84
CBWD1-223ENST00000613988 COL2A1P02458 1487 aaPredicted RBP26.55■■□□□ 1.84
CBWD1-223ENST00000613988 BRCA2P51587 3418 aa26.55■■□□□ 1.84
CBWD1-223ENST00000613988 EN2P19622 333 aaPredicted RBP26.54■■□□□ 1.84
CBWD1-223ENST00000613988 HOXD10P28358 340 aa26.54■■□□□ 1.84
CBWD1-223ENST00000613988 CTGFP29279 349 aa26.54■■□□□ 1.84
CBWD1-223ENST00000613988 CCDC84Q86UT8 332 aaPredicted RBP26.54■■□□□ 1.84
CBWD1-223ENST00000613988 TRIM47Q96LD4 638 aa26.54■■□□□ 1.84
CBWD1-223ENST00000613988 RBBP6Q7Z6E9 1792 aaKnown RBP26.53■■□□□ 1.84
CBWD1-223ENST00000613988 IGSF3O75054 1194 aa26.53■■□□□ 1.84
CBWD1-223ENST00000613988 PPP4CP60510 307 aa26.53■■□□□ 1.84
CBWD1-223ENST00000613988 SH3TC2Q8TF17 1288 aa26.53■■□□□ 1.84
CBWD1-223ENST00000613988 EXOC6BQ9Y2D4 811 aa26.53■■□□□ 1.84
CBWD1-223ENST00000613988 PHIPQ8WWQ0 1821 aa26.52■■□□□ 1.84
CBWD1-223ENST00000613988 MYCP01106 439 aaPredicted RBP26.52■■□□□ 1.84
CBWD1-223ENST00000613988 SLC4A8Q2Y0W8 1093 aa26.52■■□□□ 1.84
CBWD1-223ENST00000613988 ADGRA1Q86SQ6 560 aa26.52■■□□□ 1.84
CBWD1-223ENST00000613988 ERC1Q8IUD2 1116 aa26.52■■□□□ 1.84
CBWD1-223ENST00000613988 TGFBRAP1Q8WUH2 860 aa26.52■■□□□ 1.84
CBWD1-223ENST00000613988 DHX36Q9H2U1 1008 aaKnown RBP26.52■■□□□ 1.84
CBWD1-223ENST00000613988 PIH1D3Q9NQM4 214 aaKnown RBP26.52■■□□□ 1.84
CBWD1-223ENST00000613988 PI4KBQ9UBF8 816 aa26.52■■□□□ 1.84
CBWD1-223ENST00000613988 SRRDQ9UH36 339 aa26.52■■□□□ 1.84
CBWD1-223ENST00000613988 COG6Q9Y2V7 657 aa26.52■■□□□ 1.84
CBWD1-223ENST00000613988 SLC45A1Q9Y2W3 748 aa26.52■■□□□ 1.84
CBWD1-223ENST00000613988 BCRP11274 1271 aa26.51■■□□□ 1.83
CBWD1-223ENST00000613988 CCDC136Q96JN2 1154 aa26.51■■□□□ 1.83
CBWD1-223ENST00000613988 HERC5Q9UII4 1024 aaKnown RBP26.51■■□□□ 1.83
CBWD1-223ENST00000613988 MAST2Q6P0Q8 1798 aa26.51■■□□□ 1.83
CBWD1-223ENST00000613988 MKI67P46013 3256 aaKnown RBP26.5■■□□□ 1.83
CBWD1-223ENST00000613988 MYO5AQ9Y4I1 1855 aaKnown RBP26.5■■□□□ 1.83
CBWD1-223ENST00000613988 OSBPP22059 807 aa26.5■■□□□ 1.83
CBWD1-223ENST00000613988 CAP2P40123 477 aa26.5■■□□□ 1.83
CBWD1-223ENST00000613988 MAPKAPK5Q8IW41 473 aa26.5■■□□□ 1.83
CBWD1-223ENST00000613988 PTPRFP10586 1907 aa26.5■■□□□ 1.83
CBWD1-223ENST00000613988 SPP2Q13103 211 aa26.49■■□□□ 1.83
CBWD1-223ENST00000613988 RAET1EQ8TD07 263 aa26.49■■□□□ 1.83
CBWD1-223ENST00000613988 IDH1O75874 414 aaKnown RBP26.48■■□□□ 1.83
CBWD1-223ENST00000613988 CYP7A1P22680 504 aa26.48■■□□□ 1.83
CBWD1-223ENST00000613988 FCGRTP55899 365 aa26.48■■□□□ 1.83
CBWD1-223ENST00000613988 RRP1BQ14684 758 aaKnown RBP26.48■■□□□ 1.83
CBWD1-223ENST00000613988 HSP90AB4PQ58FF6 505 aa26.48■■□□□ 1.83
CBWD1-223ENST00000613988 AACSQ86V21 672 aa26.48■■□□□ 1.83
CBWD1-223ENST00000613988 ZNF280CQ8ND82 737 aa26.48■■□□□ 1.83
CBWD1-223ENST00000613988 SMCR8Q8TEV9 937 aaPredicted RBP26.48■■□□□ 1.83
CBWD1-223ENST00000613988 TBC1D2Q9BYX2 928 aa26.48■■□□□ 1.83
CBWD1-223ENST00000613988 CHMP4BQ9H444 224 aaKnown RBP26.48■■□□□ 1.83
CBWD1-223ENST00000613988 DDX19BQ9UMR2 479 aa26.48■■□□□ 1.83
CBWD1-223ENST00000613988 AGTPBP1Q9UPW5 1226 aa26.48■■□□□ 1.83
CBWD1-223ENST00000613988 FLT1P17948 1338 aa26.47■■□□□ 1.83
CBWD1-223ENST00000613988 MYPNQ86TC9 1320 aa26.47■■□□□ 1.83
CBWD1-223ENST00000613988 USP17L5A8MUK1 530 aa26.46■■□□□ 1.83
CBWD1-223ENST00000613988 FOXP4Q8IVH2 680 aaPredicted RBP26.46■■□□□ 1.83
CBWD1-223ENST00000613988 TRIM34Q9BYJ4 488 aa26.46■■□□□ 1.83
CBWD1-223ENST00000613988 NDUFB9Q9Y6M9 179 aa26.46■■□□□ 1.83
CBWD1-223ENST00000613988 ATAD5Q96QE3 1844 aa26.46■■□□□ 1.83
CBWD1-223ENST00000613988 DYNLL1P63167 89 aaKnown RBP26.46■■□□□ 1.83
CBWD1-223ENST00000613988 TREML2Q5T2D2 321 aa26.46■■□□□ 1.83
CBWD1-223ENST00000613988 B4GALNT3Q6L9W6 998 aa26.46■■□□□ 1.83
CBWD1-223ENST00000613988 PROCA1Q8NCQ7 364 aaPredicted RBP26.46■■□□□ 1.83
CBWD1-223ENST00000613988 PNMA3Q9UL41 463 aa26.46■■□□□ 1.83
CBWD1-223ENST00000613988 PALD1Q9ULE6 856 aa26.46■■□□□ 1.83
CBWD1-223ENST00000613988 GRK4P32298 578 aa26.45■■□□□ 1.82
CBWD1-223ENST00000613988 RPAP2Q8IXW5 612 aaPredicted RBP26.45■■□□□ 1.82
CBWD1-223ENST00000613988 CRACR2BQ8N4Y2 399 aaPredicted RBP26.45■■□□□ 1.82
CBWD1-223ENST00000613988 RHPN1Q8TCX5 695 aa26.45■■□□□ 1.82
CBWD1-223ENST00000613988 AS3MTQ9HBK9 375 aa26.45■■□□□ 1.82
CBWD1-223ENST00000613988 IL1RAPL2Q9NP60 686 aa26.45■■□□□ 1.82
CBWD1-223ENST00000613988 CDK5RAP2Q96SN8 1893 aa26.45■■□□□ 1.82
CBWD1-223ENST00000613988 SLC34A2O95436 690 aa26.44■■□□□ 1.82
CBWD1-223ENST00000613988 HMGCS2P54868 508 aa26.44■■□□□ 1.82
CBWD1-223ENST00000613988 PRKCZQ05513 592 aa26.44■■□□□ 1.82
CBWD1-223ENST00000613988 MAP3K12Q12852 859 aa26.44■■□□□ 1.82
CBWD1-223ENST00000613988 MAGEB6Q8N7X4 407 aa26.44■■□□□ 1.82
CBWD1-223ENST00000613988 MIGA1Q8NAN2 632 aa26.44■■□□□ 1.82
CBWD1-223ENST00000613988 ANTXR1Q9H6X2 564 aa26.44■■□□□ 1.82
CBWD1-223ENST00000613988 SAP30BPQ9UHR5 308 aaKnown RBP26.44■■□□□ 1.82
CBWD1-223ENST00000613988 MGAMO43451 1857 aa26.43■■□□□ 1.82
CBWD1-223ENST00000613988 METTL16Q86W50 562 aaKnown RBP26.43■■□□□ 1.82
CBWD1-223ENST00000613988 CERS3Q8IU89 383 aa26.43■■□□□ 1.82
CBWD1-223ENST00000613988 FOCADQ5VW36 1801 aa26.42■■□□□ 1.82
CBWD1-223ENST00000613988 SIPA1L1O43166 1804 aa26.42■■□□□ 1.82
CBWD1-223ENST00000613988 APBB1O00213 710 aa26.42■■□□□ 1.82
CBWD1-223ENST00000613988 HMMRO75330 724 aa26.42■■□□□ 1.82
CBWD1-223ENST00000613988 HLA-DOAP06340 250 aa26.42■■□□□ 1.82
CBWD1-223ENST00000613988 ASNSP08243 561 aa26.42■■□□□ 1.82
CBWD1-223ENST00000613988 PABPC4Q13310 644 aaKnown RBP eCLIP26.42■■□□□ 1.82
CBWD1-223ENST00000613988 ANKRD13CQ8N6S4 541 aa26.42■■□□□ 1.82
CBWD1-223ENST00000613988 BIN2Q9UBW5 565 aaPredicted RBP26.42■■□□□ 1.82
CBWD1-223ENST00000613988 USP5P45974 858 aa26.41■■□□□ 1.82
CBWD1-223ENST00000613988 MTFR1Q15390 333 aa26.41■■□□□ 1.82
CBWD1-223ENST00000613988 CLASRPQ8N2M8 674 aaKnown RBP26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms