RNA–Protein interactions for RNA: ENST00000613758.4

TMEM254-213, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best) BASIC

Gene TMEM254, Length 2,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-213ENST00000613758 DYNLL2Q96FJ2 89 aa16.26■□□□□ 0.19
TMEM254-213ENST00000613758 ALDH8A1Q9H2A2 487 aaPredicted RBP16.26■□□□□ 0.19
TMEM254-213ENST00000613758 TIAM2Q8IVF5 1701 aa16.26■□□□□ 0.19
TMEM254-213ENST00000613758 FOCADQ5VW36 1801 aa16.26■□□□□ 0.19
TMEM254-213ENST00000613758 ECM29Q5VYK3 1845 aa16.26■□□□□ 0.19
TMEM254-213ENST00000613758 TCP10L2B9ZVM9 353 aa16.26■□□□□ 0.19
TMEM254-213ENST00000613758 DDIT3P35638 169 aa16.26■□□□□ 0.19
TMEM254-213ENST00000613758 EPS15P42566 896 aa16.26■□□□□ 0.19
TMEM254-213ENST00000613758 PDE4BQ07343 736 aa16.26■□□□□ 0.19
TMEM254-213ENST00000613758 KIF4BQ2VIQ3 1234 aa16.26■□□□□ 0.19
TMEM254-213ENST00000613758 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.26■□□□□ 0.19
TMEM254-213ENST00000613758 PRC1O43663 620 aa16.25■□□□□ 0.19
TMEM254-213ENST00000613758 KDM4AO75164 1064 aa16.25■□□□□ 0.19
TMEM254-213ENST00000613758 PRDM1O75626 825 aa16.25■□□□□ 0.19
TMEM254-213ENST00000613758 FKBP1CQ5VVH2 108 aa16.25■□□□□ 0.19
TMEM254-213ENST00000613758 CYB5R4Q7L1T6 521 aa16.25■□□□□ 0.19
TMEM254-213ENST00000613758 LRRC2Q9BYS8 371 aa16.25■□□□□ 0.19
TMEM254-213ENST00000613758 DHX36Q9H2U1 1008 aaKnown RBP16.25■□□□□ 0.19
TMEM254-213ENST00000613758 VEZTQ9HBM0 779 aa16.25■□□□□ 0.19
TMEM254-213ENST00000613758 ZSWIM5Q9P217 1185 aa16.25■□□□□ 0.19
TMEM254-213ENST00000613758 ROBO3Q96MS0 1386 aa16.25■□□□□ 0.19
TMEM254-213ENST00000613758 ZC3H4Q9UPT8 1303 aaKnown RBP16.25■□□□□ 0.19
TMEM254-213ENST00000613758 ORC4O43929 436 aa16.24■□□□□ 0.19
TMEM254-213ENST00000613758 ANTXR2P58335 489 aa16.24■□□□□ 0.19
TMEM254-213ENST00000613758 Q6ZUG5 572 aa16.24■□□□□ 0.19
TMEM254-213ENST00000613758 NOL8Q76FK4 1167 aaKnown RBP16.24■□□□□ 0.19
TMEM254-213ENST00000613758 ZSCAN29Q8IWY8 852 aaPredicted RBP16.24■□□□□ 0.19
TMEM254-213ENST00000613758 MYH1P12882 1939 aa16.24■□□□□ 0.19
TMEM254-213ENST00000613758 HLA-DOAP06340 250 aa16.24■□□□□ 0.19
TMEM254-213ENST00000613758 LMOD1P29536 600 aaPredicted RBP16.24■□□□□ 0.19
TMEM254-213ENST00000613758 FGD1P98174 961 aa16.24■□□□□ 0.19
TMEM254-213ENST00000613758 ANKRD1Q15327 319 aa16.24■□□□□ 0.19
TMEM254-213ENST00000613758 SH3BP5LQ7L8J4 393 aa16.24■□□□□ 0.19
TMEM254-213ENST00000613758 ESR2Q92731 530 aa16.24■□□□□ 0.19
TMEM254-213ENST00000613758 LARP6Q9BRS8 491 aaKnown RBP16.24■□□□□ 0.19
TMEM254-213ENST00000613758 MKNK2Q9HBH9 465 aa16.24■□□□□ 0.19
TMEM254-213ENST00000613758 DDX60LQ5H9U9 1706 aaKnown RBP16.24■□□□□ 0.19
TMEM254-213ENST00000613758 WDR19Q8NEZ3 1342 aa16.23■□□□□ 0.19
TMEM254-213ENST00000613758 LAMB1P07942 1786 aa16.23■□□□□ 0.19
TMEM254-213ENST00000613758 DDTLA6NHG4 134 aaPredicted RBP16.23■□□□□ 0.19
TMEM254-213ENST00000613758 TOB2Q14106 344 aaPredicted RBP16.23■□□□□ 0.19
TMEM254-213ENST00000613758 C16orf86Q6ZW13 317 aa16.23■□□□□ 0.19
TMEM254-213ENST00000613758 FAM151AQ8WW52 585 aa16.23■□□□□ 0.19
TMEM254-213ENST00000613758 RANBP6O60518 1105 aaKnown RBP16.23■□□□□ 0.19
TMEM254-213ENST00000613758 CDK8P49336 464 aa16.23■□□□□ 0.19
TMEM254-213ENST00000613758 SLC44A5Q8NCS7 719 aa16.23■□□□□ 0.19
TMEM254-213ENST00000613758 TRPM4Q8TD43 1214 aa16.23■□□□□ 0.19
TMEM254-213ENST00000613758 ZNF287Q9HBT7 754 aa16.23■□□□□ 0.19
TMEM254-213ENST00000613758 LIMCH1Q9UPQ0 1083 aa16.23■□□□□ 0.19
TMEM254-213ENST00000613758 GABPAQ06546 454 aa16.22■□□□□ 0.19
TMEM254-213ENST00000613758 PI4KBQ9UBF8 816 aa16.22■□□□□ 0.19
TMEM254-213ENST00000613758 SERPINB13Q9UIV8 391 aa16.22■□□□□ 0.19
TMEM254-213ENST00000613758 ASTN2O75129 1339 aaPredicted RBP16.22■□□□□ 0.19
TMEM254-213ENST00000613758 CNTNAP1P78357 1384 aa16.21■□□□□ 0.19
TMEM254-213ENST00000613758 DCAF8L1A6NGE4 600 aa16.21■□□□□ 0.19
TMEM254-213ENST00000613758 GLTPD2A6NH11 291 aa16.21■□□□□ 0.19
TMEM254-213ENST00000613758 FAM83AQ86UY5 434 aa16.21■□□□□ 0.19
TMEM254-213ENST00000613758 FBXL16Q8N461 479 aa16.21■□□□□ 0.19
TMEM254-213ENST00000613758 BRF1Q92994 677 aa16.21■□□□□ 0.19
TMEM254-213ENST00000613758 TMX3Q96JJ7 454 aa16.21■□□□□ 0.19
TMEM254-213ENST00000613758 L3MBTL3Q96JM7 780 aaPredicted RBP16.21■□□□□ 0.19
TMEM254-213ENST00000613758 AGXT2Q9BYV1 514 aa16.21■□□□□ 0.19
TMEM254-213ENST00000613758 HACL1Q9UJ83 578 aa16.21■□□□□ 0.19
TMEM254-213ENST00000613758 ATRNL1Q5VV63 1379 aa16.21■□□□□ 0.19
TMEM254-213ENST00000613758 TNNI2P48788 182 aa16.21■□□□□ 0.19
TMEM254-213ENST00000613758 HIRAP54198 1017 aaPredicted RBP16.21■□□□□ 0.19
TMEM254-213ENST00000613758 FOXP4Q8IVH2 680 aaPredicted RBP16.21■□□□□ 0.19
TMEM254-213ENST00000613758 ZNF444Q8N0Y2 327 aaPredicted RBP16.21■□□□□ 0.19
TMEM254-213ENST00000613758 TMEM87BQ96K49 555 aa16.21■□□□□ 0.19
TMEM254-213ENST00000613758 EHD4Q9H223 541 aa16.21■□□□□ 0.19
TMEM254-213ENST00000613758 GPHNQ9NQX3 736 aaPredicted RBP16.21■□□□□ 0.19
TMEM254-213ENST00000613758 ADARB2Q9NS39 739 aaKnown RBP16.21■□□□□ 0.19
TMEM254-213ENST00000613758 NT5C2P49902 561 aa16.2■□□□□ 0.18
TMEM254-213ENST00000613758 FAM47AQ5JRC9 791 aa16.2■□□□□ 0.18
TMEM254-213ENST00000613758 IGDCC4Q8TDY8 1250 aa16.2■□□□□ 0.18
TMEM254-213ENST00000613758 FOXD4L1Q9NU39 408 aa16.2■□□□□ 0.18
TMEM254-213ENST00000613758 SWAP70Q9UH65 585 aa16.2■□□□□ 0.18
TMEM254-213ENST00000613758 TPCN1Q9ULQ1 816 aa16.2■□□□□ 0.18
TMEM254-213ENST00000613758 COL2A1P02458 1487 aaPredicted RBP16.2■□□□□ 0.18
TMEM254-213ENST00000613758 IFIT3O14879 490 aaKnown RBP16.2■□□□□ 0.18
TMEM254-213ENST00000613758 RASA1P20936 1047 aa16.2■□□□□ 0.18
TMEM254-213ENST00000613758 TFAP4Q01664 338 aa16.2■□□□□ 0.18
TMEM254-213ENST00000613758 TNFAIP1Q13829 316 aa16.2■□□□□ 0.18
TMEM254-213ENST00000613758 CRACR2BQ8N4Y2 399 aaPredicted RBP16.2■□□□□ 0.18
TMEM254-213ENST00000613758 ZSCAN31Q96LW9 406 aaPredicted RBP16.2■□□□□ 0.18
TMEM254-213ENST00000613758 ZKSCAN3Q9BRR0 538 aa16.2■□□□□ 0.18
TMEM254-213ENST00000613758 MTA3Q9BTC8 594 aa16.2■□□□□ 0.18
TMEM254-213ENST00000613758 TMEM39BQ9GZU3 492 aa16.2■□□□□ 0.18
TMEM254-213ENST00000613758 CHMP5Q9NZZ3 219 aa16.2■□□□□ 0.18
TMEM254-213ENST00000613758 TSPY2A6NKD2 308 aa16.19■□□□□ 0.18
TMEM254-213ENST00000613758 SH2B2O14492 632 aaPredicted RBP16.19■□□□□ 0.18
TMEM254-213ENST00000613758 RASA3Q14644 834 aa16.19■□□□□ 0.18
TMEM254-213ENST00000613758 SART3Q15020 963 aaKnown RBP16.19■□□□□ 0.18
TMEM254-213ENST00000613758 TMEM67Q5HYA8 995 aa16.19■□□□□ 0.18
TMEM254-213ENST00000613758 CSRNP1Q96S65 589 aa16.19■□□□□ 0.18
TMEM254-213ENST00000613758 UBAC1Q9BSL1 405 aa16.19■□□□□ 0.18
TMEM254-213ENST00000613758 SCAF8Q9UPN6 1271 aaKnown RBP16.19■□□□□ 0.18
TMEM254-213ENST00000613758 APOBRQ0VD83 1088 aa16.19■□□□□ 0.18
TMEM254-213ENST00000613758 ANGEL2Q5VTE6 544 aaKnown RBP16.19■□□□□ 0.18
TMEM254-213ENST00000613758 IQCA1Q86XH1 822 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms