RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 TDHQ8IZJ6 230 aa21.37■■□□□ 1.01
CSNK1E-215ENST00000612795 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.37■■□□□ 1.01
CSNK1E-215ENST00000612795 STXBP5LQ9Y2K9 1186 aa21.37■■□□□ 1.01
CSNK1E-215ENST00000612795 UBTFL1P0CB47 393 aaPredicted RBP21.36■■□□□ 1.01
CSNK1E-215ENST00000612795 ADORA1P30542 326 aa21.36■■□□□ 1.01
CSNK1E-215ENST00000612795 IL15P40933 162 aaPredicted RBP21.36■■□□□ 1.01
CSNK1E-215ENST00000612795 HMGCS2P54868 508 aa21.36■■□□□ 1.01
CSNK1E-215ENST00000612795 TRIM32Q13049 653 aa21.36■■□□□ 1.01
CSNK1E-215ENST00000612795 ZNF280CQ8ND82 737 aa21.36■■□□□ 1.01
CSNK1E-215ENST00000612795 OSBPL5Q9H0X9 879 aaPredicted RBP21.36■■□□□ 1.01
CSNK1E-215ENST00000612795 ANP32CO43423 234 aa21.35■■□□□ 1.01
CSNK1E-215ENST00000612795 RASGRF1Q13972 1273 aa21.35■■□□□ 1.01
CSNK1E-215ENST00000612795 SSH1Q8WYL5 1049 aa21.35■■□□□ 1.01
CSNK1E-215ENST00000612795 TBC1D2Q9BYX2 928 aa21.35■■□□□ 1.01
CSNK1E-215ENST00000612795 UBE2OQ9C0C9 1292 aaKnown RBP21.35■■□□□ 1.01
CSNK1E-215ENST00000612795 PDS5AQ29RF7 1337 aaKnown RBP21.34■■□□□ 1.01
CSNK1E-215ENST00000612795 TBC1D12O60347 775 aa21.34■■□□□ 1.01
CSNK1E-215ENST00000612795 FAM9BQ8IZU0 186 aa21.34■■□□□ 1.01
CSNK1E-215ENST00000612795 FAM163AQ96GL9 167 aaPredicted RBP21.34■■□□□ 1.01
CSNK1E-215ENST00000612795 ASCC2Q9H1I8 757 aaPredicted RBP21.34■■□□□ 1.01
CSNK1E-215ENST00000612795 A0A0C4DFX4 3053 aa21.34■■□□□ 1.01
CSNK1E-215ENST00000612795 COL2A1P02458 1487 aaPredicted RBP21.33■■□□□ 1.01
CSNK1E-215ENST00000612795 ERICH6Q7L0X2 663 aa21.33■■□□□ 1.01
CSNK1E-215ENST00000612795 TRIB2Q92519 343 aa21.33■■□□□ 1.01
CSNK1E-215ENST00000612795 GJD2Q9UKL4 321 aa21.33■■□□□ 1.01
CSNK1E-215ENST00000612795 OGDHLQ9ULD0 1010 aa21.33■■□□□ 1.01
CSNK1E-215ENST00000612795 ZBTB22O15209 634 aa21.32■■□□□ 1
CSNK1E-215ENST00000612795 PRKAR2AP13861 404 aaKnown RBP21.32■■□□□ 1
CSNK1E-215ENST00000612795 CYP2B6P20813 491 aa21.32■■□□□ 1
CSNK1E-215ENST00000612795 IRX3P78415 501 aaPredicted RBP21.32■■□□□ 1
CSNK1E-215ENST00000612795 MECOMQ03112 1051 aa21.32■■□□□ 1
CSNK1E-215ENST00000612795 AS3MTQ9HBK9 375 aa21.32■■□□□ 1
CSNK1E-215ENST00000612795 MTMR10Q9NXD2 777 aa21.32■■□□□ 1
CSNK1E-215ENST00000612795 PA2G4Q9UQ80 394 aaKnown RBP21.32■■□□□ 1
CSNK1E-215ENST00000612795 CDK5RAP2Q96SN8 1893 aa21.32■■□□□ 1
CSNK1E-215ENST00000612795 SIPA1L1O43166 1804 aa21.32■■□□□ 1
CSNK1E-215ENST00000612795 GPR75-ASB3A0A0A6YYF3 556 aa21.31■■□□□ 1
CSNK1E-215ENST00000612795 RHBDL3P58872 404 aa21.31■■□□□ 1
CSNK1E-215ENST00000612795 MAST2Q6P0Q8 1798 aa21.31■■□□□ 1
CSNK1E-215ENST00000612795 PFASO15067 1338 aa21.3■■□□□ 1
CSNK1E-215ENST00000612795 USP17L5A8MUK1 530 aa21.3■■□□□ 1
CSNK1E-215ENST00000612795 NPM3O75607 178 aaKnown RBP21.3■■□□□ 1
CSNK1E-215ENST00000612795 CAP2P40123 477 aa21.3■■□□□ 1
CSNK1E-215ENST00000612795 SOCS4Q8WXH5 440 aa21.3■■□□□ 1
CSNK1E-215ENST00000612795 MORF4L1Q9UBU8 362 aa21.3■■□□□ 1
CSNK1E-215ENST00000612795 ZNF521Q96K83 1311 aa21.29■■□□□ 1
CSNK1E-215ENST00000612795 FOCADQ5VW36 1801 aa21.29■■□□□ 1
CSNK1E-215ENST00000612795 TIMM10P62072 90 aa21.29■■□□□ 1
CSNK1E-215ENST00000612795 PDE3AQ14432 1141 aa21.29■■□□□ 1
CSNK1E-215ENST00000612795 MVPQ14764 893 aaKnown RBP21.29■■□□□ 1
CSNK1E-215ENST00000612795 SH3D19Q5HYK7 790 aa21.29■■□□□ 1
CSNK1E-215ENST00000612795 NUDT12Q9BQG2 462 aa21.29■■□□□ 1
CSNK1E-215ENST00000612795 A0A1B0GUL7 405 aa21.28■■□□□ 1
CSNK1E-215ENST00000612795 MAP4K4O95819 1239 aaPredicted RBP21.28■■□□□ 1
CSNK1E-215ENST00000612795 LDHCP07864 332 aa21.28■■□□□ 1
CSNK1E-215ENST00000612795 ZKSCAN1P17029 563 aaPredicted RBP21.28■■□□□ 1
CSNK1E-215ENST00000612795 GSTO1P78417 241 aa21.28■■□□□ 1
CSNK1E-215ENST00000612795 MAP3K21Q5TCX8 1036 aa21.28■■□□□ 1
CSNK1E-215ENST00000612795 SMC4Q9NTJ3 1288 aa21.28■■□□□ 1
CSNK1E-215ENST00000612795 TMOD4Q9NZQ9 345 aa21.28■■□□□ 1
CSNK1E-215ENST00000612795 HDAC5Q9UQL6 1122 aa21.28■■□□□ 1
CSNK1E-215ENST00000612795 UNC80Q8N2C7 3258 aa21.27■■□□□ 1
CSNK1E-215ENST00000612795 MTMR2Q13614 643 aa21.27■■□□□ 1
CSNK1E-215ENST00000612795 CCAR1Q8IX12 1150 aaKnown RBP21.27■■□□□ 1
CSNK1E-215ENST00000612795 TRMT44Q8IYL2 757 aaKnown RBP21.27■■□□□ 1
CSNK1E-215ENST00000612795 XAGE2Q96GT9 111 aa21.27■■□□□ 1
CSNK1E-215ENST00000612795 COPRSQ9NQ92 184 aa21.27■■□□□ 1
CSNK1E-215ENST00000612795 HERC5Q9UII4 1024 aaKnown RBP21.27■■□□□ 1
CSNK1E-215ENST00000612795 AKAP2Q9Y2D5 859 aa21.27■■□□□ 1
CSNK1E-215ENST00000612795 TEX11Q8IYF3 940 aa21.26■□□□□ 0.99
CSNK1E-215ENST00000612795 GPRC5AQ8NFJ5 357 aa21.26■□□□□ 0.99
CSNK1E-215ENST00000612795 ZNF384Q8TF68 577 aa21.26■□□□□ 0.99
CSNK1E-215ENST00000612795 E9PSI1 815 aa21.25■□□□□ 0.99
CSNK1E-215ENST00000612795 XRCC5P13010 732 aaKnown RBP21.25■□□□□ 0.99
CSNK1E-215ENST00000612795 MDM2Q00987 491 aaPredicted RBP21.25■□□□□ 0.99
CSNK1E-215ENST00000612795 RRP1BQ14684 758 aaKnown RBP21.25■□□□□ 0.99
CSNK1E-215ENST00000612795 ALDH1L2Q3SY69 923 aa21.25■□□□□ 0.99
CSNK1E-215ENST00000612795 NOL10Q9BSC4 688 aaKnown RBP21.25■□□□□ 0.99
CSNK1E-215ENST00000612795 RAI14Q9P0K7 980 aa21.25■□□□□ 0.99
CSNK1E-215ENST00000612795 PEX10O60683 326 aa21.24■□□□□ 0.99
CSNK1E-215ENST00000612795 ASNSP08243 561 aa21.24■□□□□ 0.99
CSNK1E-215ENST00000612795 COL6A1P12109 1028 aa21.24■□□□□ 0.99
CSNK1E-215ENST00000612795 MAPK4P31152 587 aa21.24■□□□□ 0.99
CSNK1E-215ENST00000612795 BACE1P56817 501 aa21.24■□□□□ 0.99
CSNK1E-215ENST00000612795 HERVK_113P62684 666 aa21.24■□□□□ 0.99
CSNK1E-215ENST00000612795 CACNB2Q08289 660 aaPredicted RBP21.24■□□□□ 0.99
CSNK1E-215ENST00000612795 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.24■□□□□ 0.99
CSNK1E-215ENST00000612795 NSUN4Q96CB9 384 aaKnown RBP21.24■□□□□ 0.99
CSNK1E-215ENST00000612795 COL25A1Q9BXS0 654 aaPredicted RBP21.24■□□□□ 0.99
CSNK1E-215ENST00000612795 CWC22Q9HCG8 908 aaKnown RBP21.24■□□□□ 0.99
CSNK1E-215ENST00000612795 CCND3P30281 292 aaPredicted RBP21.23■□□□□ 0.99
CSNK1E-215ENST00000612795 HOXA7P31268 230 aaPredicted RBP21.23■□□□□ 0.99
CSNK1E-215ENST00000612795 RGS2P41220 211 aa21.23■□□□□ 0.99
CSNK1E-215ENST00000612795 TFCP2Q12800 502 aa21.23■□□□□ 0.99
CSNK1E-215ENST00000612795 LRRC26Q2I0M4 334 aa21.23■□□□□ 0.99
CSNK1E-215ENST00000612795 GORABQ5T7V8 394 aa21.23■□□□□ 0.99
CSNK1E-215ENST00000612795 SPATA5Q8NB90 893 aa21.23■□□□□ 0.99
CSNK1E-215ENST00000612795 NEUROD6Q96NK8 337 aa21.23■□□□□ 0.99
CSNK1E-215ENST00000612795 P2RX7Q99572 595 aaKnown RBP21.23■□□□□ 0.99
CSNK1E-215ENST00000612795 WDR18Q9BV38 432 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms