RNA–Protein interactions for RNA: ENST00000612509.4

SEMA3B-211, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-211ENST00000612509 INHBEP58166 350 aa21.84■■□□□ 1.09
SEMA3B-211ENST00000612509 PPATQ06203 517 aa21.84■■□□□ 1.09
SEMA3B-211ENST00000612509 ZSCAN25Q6NSZ9 544 aa21.84■■□□□ 1.09
SEMA3B-211ENST00000612509 IFNL1Q8IU54 200 aa21.84■■□□□ 1.09
SEMA3B-211ENST00000612509 MS4A4AQ96JQ5 239 aa21.84■■□□□ 1.09
SEMA3B-211ENST00000612509 CRNKL1Q9BZJ0 848 aaKnown RBP21.84■■□□□ 1.09
SEMA3B-211ENST00000612509 LNPKQ9C0E8 428 aa21.84■■□□□ 1.09
SEMA3B-211ENST00000612509 PI4KBQ9UBF8 816 aa21.84■■□□□ 1.09
SEMA3B-211ENST00000612509 HERC5Q9UII4 1024 aaKnown RBP21.84■■□□□ 1.09
SEMA3B-211ENST00000612509 PALD1Q9ULE6 856 aa21.84■■□□□ 1.09
SEMA3B-211ENST00000612509 PHIPQ8WWQ0 1821 aa21.84■■□□□ 1.09
SEMA3B-211ENST00000612509 TESPA1A2RU30 521 aaPredicted RBP21.83■■□□□ 1.09
SEMA3B-211ENST00000612509 IGF2BP3O00425 579 aaKnown RBP eCLIP21.83■■□□□ 1.09
SEMA3B-211ENST00000612509 IRF6O14896 467 aa21.83■■□□□ 1.09
SEMA3B-211ENST00000612509 MBD4O95243 580 aa21.83■■□□□ 1.09
SEMA3B-211ENST00000612509 HLA-DOAP06340 250 aa21.83■■□□□ 1.09
SEMA3B-211ENST00000612509 GTF2A2P52657 109 aa21.83■■□□□ 1.09
SEMA3B-211ENST00000612509 B4GALNT3Q6L9W6 998 aa21.83■■□□□ 1.09
SEMA3B-211ENST00000612509 CTNND1O60716 968 aaKnown RBP21.82■■□□□ 1.08
SEMA3B-211ENST00000612509 SLC4A8Q2Y0W8 1093 aa21.82■■□□□ 1.08
SEMA3B-211ENST00000612509 BRI3BPQ8WY22 251 aa21.82■■□□□ 1.08
SEMA3B-211ENST00000612509 DNAJC18Q9H819 358 aa21.82■■□□□ 1.08
SEMA3B-211ENST00000612509 ARMT1Q9H993 441 aa21.82■■□□□ 1.08
SEMA3B-211ENST00000612509 PICK1Q9NRD5 415 aa21.82■■□□□ 1.08
SEMA3B-211ENST00000612509 CASP8AP2Q9UKL3 1982 aa21.81■■□□□ 1.08
SEMA3B-211ENST00000612509 PTPRFP10586 1907 aa21.81■■□□□ 1.08
SEMA3B-211ENST00000612509 CCL15-CCL14A0A0B4J2E2 113 aa21.81■■□□□ 1.08
SEMA3B-211ENST00000612509 ALDH1A1P00352 501 aa21.81■■□□□ 1.08
SEMA3B-211ENST00000612509 CCL15Q16663 113 aa21.81■■□□□ 1.08
SEMA3B-211ENST00000612509 METTL16Q86W50 562 aaKnown RBP21.81■■□□□ 1.08
SEMA3B-211ENST00000612509 STAP2Q9UGK3 403 aa21.81■■□□□ 1.08
SEMA3B-211ENST00000612509 PTPRAP18433 802 aa21.8■■□□□ 1.08
SEMA3B-211ENST00000612509 PDE1AP54750 535 aa21.8■■□□□ 1.08
SEMA3B-211ENST00000612509 NUCB1Q02818 461 aa21.8■■□□□ 1.08
SEMA3B-211ENST00000612509 SNAPC2Q13487 334 aa21.8■■□□□ 1.08
SEMA3B-211ENST00000612509 CHD1LQ86WJ1 897 aa21.8■■□□□ 1.08
SEMA3B-211ENST00000612509 CRACR2BQ8N4Y2 399 aaPredicted RBP21.8■■□□□ 1.08
SEMA3B-211ENST00000612509 SDR42E1Q8WUS8 393 aa21.8■■□□□ 1.08
SEMA3B-211ENST00000612509 PTPN18Q99952 460 aa21.8■■□□□ 1.08
SEMA3B-211ENST00000612509 CFHR5Q9BXR6 569 aa21.8■■□□□ 1.08
SEMA3B-211ENST00000612509 TRIM34Q9BYJ4 488 aa21.8■■□□□ 1.08
SEMA3B-211ENST00000612509 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.8■■□□□ 1.08
SEMA3B-211ENST00000612509 KCNH4Q9UQ05 1017 aa21.8■■□□□ 1.08
SEMA3B-211ENST00000612509 BAZ2AQ9UIF9 1905 aaKnown RBP21.8■■□□□ 1.08
SEMA3B-211ENST00000612509 RRP1BQ14684 758 aaKnown RBP21.79■■□□□ 1.08
SEMA3B-211ENST00000612509 APPBP2Q92624 585 aa21.79■■□□□ 1.08
SEMA3B-211ENST00000612509 FSD1Q9BTV5 496 aa21.79■■□□□ 1.08
SEMA3B-211ENST00000612509 PUS7LQ9H0K6 701 aaKnown RBP21.79■■□□□ 1.08
SEMA3B-211ENST00000612509 RNF113AO15541 343 aaKnown RBP21.78■■□□□ 1.08
SEMA3B-211ENST00000612509 TBC1D8O95759 1140 aa21.78■■□□□ 1.08
SEMA3B-211ENST00000612509 ZFYP08048 801 aaPredicted RBP21.78■■□□□ 1.08
SEMA3B-211ENST00000612509 CETPP11597 493 aa21.78■■□□□ 1.08
SEMA3B-211ENST00000612509 OTUD7BQ6GQQ9 843 aa21.78■■□□□ 1.08
SEMA3B-211ENST00000612509 FOXP4Q8IVH2 680 aaPredicted RBP21.78■■□□□ 1.08
SEMA3B-211ENST00000612509 EHD4Q9H223 541 aa21.78■■□□□ 1.08
SEMA3B-211ENST00000612509 DCP1AQ9NPI6 582 aaPredicted RBP21.78■■□□□ 1.08
SEMA3B-211ENST00000612509 PRKAB2O43741 272 aa21.77■■□□□ 1.08
SEMA3B-211ENST00000612509 CAP2P40123 477 aa21.77■■□□□ 1.08
SEMA3B-211ENST00000612509 LRRFIP1Q32MZ4 808 aaKnown RBP21.77■■□□□ 1.08
SEMA3B-211ENST00000612509 TTC6Q86TZ1 520 aa21.77■■□□□ 1.08
SEMA3B-211ENST00000612509 SERPINB13Q9UIV8 391 aa21.77■■□□□ 1.08
SEMA3B-211ENST00000612509 ZHX2Q9Y6X8 837 aa21.77■■□□□ 1.08
SEMA3B-211ENST00000612509 POLR3DP05423 398 aaPredicted RBP21.76■■□□□ 1.07
SEMA3B-211ENST00000612509 CCDC84Q86UT8 332 aaPredicted RBP21.76■■□□□ 1.07
SEMA3B-211ENST00000612509 FAM43AQ8N2R8 423 aa21.76■■□□□ 1.07
SEMA3B-211ENST00000612509 OSBP2Q969R2 916 aa21.76■■□□□ 1.07
SEMA3B-211ENST00000612509 MCM9Q9NXL9 1143 aa21.76■■□□□ 1.07
SEMA3B-211ENST00000612509 LOC285556D6RIA3 1793 aa21.75■■□□□ 1.07
SEMA3B-211ENST00000612509 NOM1Q5C9Z4 860 aaKnown RBP21.75■■□□□ 1.07
SEMA3B-211ENST00000612509 TNS4Q8IZW8 715 aa21.75■■□□□ 1.07
SEMA3B-211ENST00000612509 R3HDMLQ9H3Y0 253 aa21.75■■□□□ 1.07
SEMA3B-211ENST00000612509 ATP8A2Q9NTI2 1148 aa21.75■■□□□ 1.07
SEMA3B-211ENST00000612509 AFG3L2Q9Y4W6 797 aa21.75■■□□□ 1.07
SEMA3B-211ENST00000612509 SLC4A4Q9Y6R1 1079 aa21.75■■□□□ 1.07
SEMA3B-211ENST00000612509 MYH8P13535 1937 aa21.74■■□□□ 1.07
SEMA3B-211ENST00000612509 BTBD19C9JJ37 291 aa21.74■■□□□ 1.07
SEMA3B-211ENST00000612509 CXCL11O14625 94 aa21.74■■□□□ 1.07
SEMA3B-211ENST00000612509 GDF11O95390 407 aa21.74■■□□□ 1.07
SEMA3B-211ENST00000612509 PLCD1P51178 756 aa21.74■■□□□ 1.07
SEMA3B-211ENST00000612509 CRHR2Q13324 411 aa21.74■■□□□ 1.07
SEMA3B-211ENST00000612509 ZCCHC17Q9NP64 241 aaKnown RBP21.74■■□□□ 1.07
SEMA3B-211ENST00000612509 A0A0G2JLL6 359 aaPredicted RBP21.73■■□□□ 1.07
SEMA3B-211ENST00000612509 M0R2C6 588 aa21.73■■□□□ 1.07
SEMA3B-211ENST00000612509 GPR25O00155 361 aa21.73■■□□□ 1.07
SEMA3B-211ENST00000612509 GPAA1O43292 621 aa21.73■■□□□ 1.07
SEMA3B-211ENST00000612509 CYP2D6P10635 497 aa21.73■■□□□ 1.07
SEMA3B-211ENST00000612509 EVX2Q03828 476 aa21.73■■□□□ 1.07
SEMA3B-211ENST00000612509 MOGSQ13724 837 aa21.73■■□□□ 1.07
SEMA3B-211ENST00000612509 TAF1CQ15572 869 aaPredicted RBP21.73■■□□□ 1.07
SEMA3B-211ENST00000612509 PRRT2Q7Z6L0 340 aaPredicted RBP21.73■■□□□ 1.07
SEMA3B-211ENST00000612509 PLEKHM2Q8IWE5 1019 aa21.73■■□□□ 1.07
SEMA3B-211ENST00000612509 EVI5LQ96CN4 794 aa21.73■■□□□ 1.07
SEMA3B-211ENST00000612509 STRBPQ96SI9 672 aaKnown RBP21.73■■□□□ 1.07
SEMA3B-211ENST00000612509 TRIM75PA6NK02 468 aa21.72■■□□□ 1.07
SEMA3B-211ENST00000612509 ASNSP08243 561 aa21.72■■□□□ 1.07
SEMA3B-211ENST00000612509 GABPAQ06546 454 aa21.72■■□□□ 1.07
SEMA3B-211ENST00000612509 SHROOM1Q2M3G4 852 aaPredicted RBP21.72■■□□□ 1.07
SEMA3B-211ENST00000612509 TATDN1Q6P1N9 297 aa21.72■■□□□ 1.07
SEMA3B-211ENST00000612509 ZNF296Q8WUU4 475 aaPredicted RBP21.72■■□□□ 1.07
SEMA3B-211ENST00000612509 DDRGK1Q96HY6 314 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms