RNA–Protein interactions for RNA: ENST00000610485.1

SNX20-205, Transcript of sorting nexin 20, humanhuman

TSL 5 BASIC

Gene SNX20, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-205ENST00000610485 MAGEB6Q8N7X4 407 aa15.69■□□□□ 0.1
SNX20-205ENST00000610485 EFCC1Q9HA90 598 aa15.69■□□□□ 0.1
SNX20-205ENST00000610485 DOCK1Q14185 1865 aa15.69■□□□□ 0.1
SNX20-205ENST00000610485 ADGRA2Q96PE1 1338 aa15.68■□□□□ 0.1
SNX20-205ENST00000610485 AK9Q5TCS8 1911 aa15.68■□□□□ 0.1
SNX20-205ENST00000610485 MIGA1Q8NAN2 632 aa15.68■□□□□ 0.1
SNX20-205ENST00000610485 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.68■□□□□ 0.1
SNX20-205ENST00000610485 PTPN22Q9Y2R2 807 aa15.68■□□□□ 0.1
SNX20-205ENST00000610485 SIPA1L1O43166 1804 aa15.67■□□□□ 0.1
SNX20-205ENST00000610485 CAP2P40123 477 aa15.67■□□□□ 0.1
SNX20-205ENST00000610485 RRP1BQ14684 758 aaKnown RBP15.67■□□□□ 0.1
SNX20-205ENST00000610485 C17orf99Q6UX52 265 aa15.67■□□□□ 0.1
SNX20-205ENST00000610485 FASTKD5Q7L8L6 764 aaKnown RBP15.67■□□□□ 0.1
SNX20-205ENST00000610485 LRRCC1Q9C099 1032 aa15.67■□□□□ 0.1
SNX20-205ENST00000610485 DNAJC18Q9H819 358 aa15.67■□□□□ 0.1
SNX20-205ENST00000610485 FOCADQ5VW36 1801 aa15.66■□□□□ 0.1
SNX20-205ENST00000610485 MYO5AQ9Y4I1 1855 aaKnown RBP15.66■□□□□ 0.1
SNX20-205ENST00000610485 ATP5JP18859 108 aa15.66■□□□□ 0.1
SNX20-205ENST00000610485 SOX10P56693 466 aa15.66■□□□□ 0.1
SNX20-205ENST00000610485 LACTBP83111 547 aaPredicted RBP15.66■□□□□ 0.1
SNX20-205ENST00000610485 MLLT1Q03111 559 aaPredicted RBP15.66■□□□□ 0.1
SNX20-205ENST00000610485 ARHGEF6Q15052 776 aa15.66■□□□□ 0.1
SNX20-205ENST00000610485 CCDC84Q86UT8 332 aaPredicted RBP15.66■□□□□ 0.1
SNX20-205ENST00000610485 FOXP4Q8IVH2 680 aaPredicted RBP15.66■□□□□ 0.1
SNX20-205ENST00000610485 PARK7Q99497 189 aaKnown RBP15.66■□□□□ 0.1
SNX20-205ENST00000610485 DNAJC2Q99543 621 aaKnown RBP15.66■□□□□ 0.1
SNX20-205ENST00000610485 RIOK1Q9BRS2 568 aaKnown RBP15.66■□□□□ 0.1
SNX20-205ENST00000610485 TBC1D2Q9BYX2 928 aa15.66■□□□□ 0.1
SNX20-205ENST00000610485 PALD1Q9ULE6 856 aa15.66■□□□□ 0.1
SNX20-205ENST00000610485 SLC45A1Q9Y2W3 748 aa15.66■□□□□ 0.1
SNX20-205ENST00000610485 TRIM75PA6NK02 468 aa15.65■□□□□ 0.1
SNX20-205ENST00000610485 GOLIM4O00461 696 aa15.65■□□□□ 0.1
SNX20-205ENST00000610485 PDE6AP16499 860 aa15.65■□□□□ 0.1
SNX20-205ENST00000610485 RRP1P56182 461 aaKnown RBP15.65■□□□□ 0.1
SNX20-205ENST00000610485 SLC9C2Q5TAH2 1124 aa15.65■□□□□ 0.1
SNX20-205ENST00000610485 SAP30BPQ9UHR5 308 aaKnown RBP15.65■□□□□ 0.1
SNX20-205ENST00000610485 CPA4Q9UI42 421 aa15.65■□□□□ 0.1
SNX20-205ENST00000610485 PHIPQ8WWQ0 1821 aa15.65■□□□□ 0.1
SNX20-205ENST00000610485 TCRBV5S4A2TA0A5A2 114 aa15.64■□□□□ 0.09
SNX20-205ENST00000610485 HLA-DOAP06340 250 aa15.64■□□□□ 0.09
SNX20-205ENST00000610485 USP5P45974 858 aa15.64■□□□□ 0.09
SNX20-205ENST00000610485 KIF22Q14807 665 aa15.64■□□□□ 0.09
SNX20-205ENST00000610485 GADL1Q6ZQY3 521 aa15.64■□□□□ 0.09
SNX20-205ENST00000610485 ZNF280CQ8ND82 737 aa15.64■□□□□ 0.09
SNX20-205ENST00000610485 EDC3Q96F86 508 aaKnown RBP15.64■□□□□ 0.09
SNX20-205ENST00000610485 CDK5RAP2Q96SN8 1893 aa15.64■□□□□ 0.09
SNX20-205ENST00000610485 HAUS7Q99871 368 aa15.64■□□□□ 0.09
SNX20-205ENST00000610485 ARHGAP39Q9C0H5 1083 aa15.64■□□□□ 0.09
SNX20-205ENST00000610485 BCL11AQ9H165 835 aa15.64■□□□□ 0.09
SNX20-205ENST00000610485 DCTPP1Q9H773 170 aa15.64■□□□□ 0.09
SNX20-205ENST00000610485 PAG1Q9NWQ8 432 aa15.64■□□□□ 0.09
SNX20-205ENST00000610485 HTTP42858 3142 aa15.64■□□□□ 0.09
SNX20-205ENST00000610485 ZNF532Q9HCE3 1301 aa15.64■□□□□ 0.09
SNX20-205ENST00000610485 MAGEB6P1A0A0J9YX57 407 aa15.63■□□□□ 0.09
SNX20-205ENST00000610485 USP17L5A8MUK1 530 aa15.63■□□□□ 0.09
SNX20-205ENST00000610485 SMARCA5O60264 1052 aaPredicted RBP15.63■□□□□ 0.09
SNX20-205ENST00000610485 GNRH1P01148 92 aa15.63■□□□□ 0.09
SNX20-205ENST00000610485 CYP2C8P10632 490 aa15.63■□□□□ 0.09
SNX20-205ENST00000610485 BCRP11274 1271 aa15.63■□□□□ 0.09
SNX20-205ENST00000610485 SPP2Q13103 211 aa15.63■□□□□ 0.09
SNX20-205ENST00000610485 CRACR2BQ8N4Y2 399 aaPredicted RBP15.63■□□□□ 0.09
SNX20-205ENST00000610485 PROCA1Q8NCQ7 364 aaPredicted RBP15.63■□□□□ 0.09
SNX20-205ENST00000610485 ARMC5Q96C12 935 aa15.63■□□□□ 0.09
SNX20-205ENST00000610485 EHD4Q9H223 541 aa15.63■□□□□ 0.09
SNX20-205ENST00000610485 BOLA2Q9H3K6 86 aa15.63■□□□□ 0.09
SNX20-205ENST00000610485 GINM1Q9NU53 330 aa15.63■□□□□ 0.09
SNX20-205ENST00000610485 AGTPBP1Q9UPW5 1226 aa15.63■□□□□ 0.09
SNX20-205ENST00000610485 ASNSP08243 561 aa15.62■□□□□ 0.09
SNX20-205ENST00000610485 JAG1P78504 1218 aa15.62■□□□□ 0.09
SNX20-205ENST00000610485 SH3D19Q5HYK7 790 aa15.62■□□□□ 0.09
SNX20-205ENST00000610485 WDR18Q9BV38 432 aa15.62■□□□□ 0.09
SNX20-205ENST00000610485 TRIM34Q9BYJ4 488 aa15.62■□□□□ 0.09
SNX20-205ENST00000610485 AS3MTQ9HBK9 375 aa15.62■□□□□ 0.09
SNX20-205ENST00000610485 PTCH2Q9Y6C5 1203 aa15.62■□□□□ 0.09
SNX20-205ENST00000610485 DDX60LQ5H9U9 1706 aaKnown RBP15.62■□□□□ 0.09
SNX20-205ENST00000610485 CTGFP29279 349 aa15.61■□□□□ 0.09
SNX20-205ENST00000610485 ADD2P35612 726 aa15.61■□□□□ 0.09
SNX20-205ENST00000610485 PRMT2P55345 433 aa15.61■□□□□ 0.09
SNX20-205ENST00000610485 SLC4A8Q2Y0W8 1093 aa15.61■□□□□ 0.09
SNX20-205ENST00000610485 TREML2Q5T2D2 321 aa15.61■□□□□ 0.09
SNX20-205ENST00000610485 TATDN1Q6P1N9 297 aa15.61■□□□□ 0.09
SNX20-205ENST00000610485 CRNKL1Q9BZJ0 848 aaKnown RBP15.61■□□□□ 0.09
SNX20-205ENST00000610485 SERPINB13Q9UIV8 391 aa15.61■□□□□ 0.09
SNX20-205ENST00000610485 PCDHB15Q9Y5E8 787 aa15.61■□□□□ 0.09
SNX20-205ENST00000610485 LOC285556D6RIA3 1793 aa15.6■□□□□ 0.09
SNX20-205ENST00000610485 ZSWIM8A7E2V4 1837 aa15.6■□□□□ 0.09
SNX20-205ENST00000610485 ATAD5Q96QE3 1844 aa15.6■□□□□ 0.09
SNX20-205ENST00000610485 PSMC4P43686 418 aa15.6■□□□□ 0.09
SNX20-205ENST00000610485 SHROOM1Q2M3G4 852 aaPredicted RBP15.6■□□□□ 0.09
SNX20-205ENST00000610485 TTC6Q86TZ1 520 aa15.6■□□□□ 0.09
SNX20-205ENST00000610485 LCORLQ8N3X6 602 aa15.6■□□□□ 0.09
SNX20-205ENST00000610485 TRIM47Q96LD4 638 aa15.6■□□□□ 0.09
SNX20-205ENST00000610485 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.6■□□□□ 0.09
SNX20-205ENST00000610485 ECHDC1Q9NTX5 307 aa15.6■□□□□ 0.09
SNX20-205ENST00000610485 ZBTB21Q9ULJ3 1066 aa15.6■□□□□ 0.09
SNX20-205ENST00000610485 PTPRFP10586 1907 aa15.6■□□□□ 0.09
SNX20-205ENST00000610485 GDF11O95390 407 aa15.59■□□□□ 0.09
SNX20-205ENST00000610485 HMGCS2P54868 508 aa15.59■□□□□ 0.09
SNX20-205ENST00000610485 BACE1P56817 501 aa15.59■□□□□ 0.09
SNX20-205ENST00000610485 YTHDC1Q96MU7 727 aaKnown RBP15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms