RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 IGDCC4Q8TDY8 1250 aa23.34■■□□□ 1.33
SSBP3-216ENST00000610401 TIGD1Q96MW7 591 aa23.34■■□□□ 1.33
SSBP3-216ENST00000610401 C19orf44Q9H6X5 657 aa23.34■■□□□ 1.33
SSBP3-216ENST00000610401 SPECC1LQ69YQ0 1117 aa23.33■■□□□ 1.33
SSBP3-216ENST00000610401 ARHGAP6O43182 974 aa23.33■■□□□ 1.32
SSBP3-216ENST00000610401 LMAN1P49257 510 aa23.33■■□□□ 1.32
SSBP3-216ENST00000610401 EVA1CP58658 441 aa23.33■■□□□ 1.32
SSBP3-216ENST00000610401 GDAP1L1Q96MZ0 367 aa23.33■■□□□ 1.32
SSBP3-216ENST00000610401 MED15Q96RN5 788 aa23.33■■□□□ 1.32
SSBP3-216ENST00000610401 EPB41L4AQ9HCS5 686 aaPredicted RBP23.33■■□□□ 1.32
SSBP3-216ENST00000610401 CYP2D7A0A087X1C5 515 aa23.32■■□□□ 1.32
SSBP3-216ENST00000610401 SMC1AQ14683 1233 aaKnown RBP23.32■■□□□ 1.32
SSBP3-216ENST00000610401 TEX13AQ9BXU3 409 aaPredicted RBP23.32■■□□□ 1.32
SSBP3-216ENST00000610401 TFR2Q9UP52 801 aa23.32■■□□□ 1.32
SSBP3-216ENST00000610401 WTIPA6NIX2 430 aaPredicted RBP23.32■■□□□ 1.32
SSBP3-216ENST00000610401 ZNF569Q5MCW4 686 aa23.32■■□□□ 1.32
SSBP3-216ENST00000610401 TMEM139Q8IV31 216 aa23.32■■□□□ 1.32
SSBP3-216ENST00000610401 AFDNP55196 1824 aaKnown RBP23.32■■□□□ 1.32
SSBP3-216ENST00000610401 IRS4O14654 1257 aaPredicted RBP23.32■■□□□ 1.32
SSBP3-216ENST00000610401 IRX5P78411 483 aaPredicted RBP23.32■■□□□ 1.32
SSBP3-216ENST00000610401 NTRK3Q16288 839 aa23.32■■□□□ 1.32
SSBP3-216ENST00000610401 IFNL3Q8IZI9 196 aa23.32■■□□□ 1.32
SSBP3-216ENST00000610401 RBL2Q08999 1139 aa23.31■■□□□ 1.32
SSBP3-216ENST00000610401 ZNF174Q15697 407 aa23.31■■□□□ 1.32
SSBP3-216ENST00000610401 MFSD6Q6ZSS7 791 aa23.31■■□□□ 1.32
SSBP3-216ENST00000610401 ACRBPQ8NEB7 543 aa23.31■■□□□ 1.32
SSBP3-216ENST00000610401 TTLL11Q8NHH1 800 aa23.31■■□□□ 1.32
SSBP3-216ENST00000610401 CDC5LQ99459 802 aaKnown RBP23.31■■□□□ 1.32
SSBP3-216ENST00000610401 CUTAO60888 179 aa23.31■■□□□ 1.32
SSBP3-216ENST00000610401 CIAO1O76071 339 aa23.31■■□□□ 1.32
SSBP3-216ENST00000610401 RTN1Q16799 776 aa23.31■■□□□ 1.32
SSBP3-216ENST00000610401 SLC4A4Q9Y6R1 1079 aa23.31■■□□□ 1.32
SSBP3-216ENST00000610401 MRC1P22897 1456 aa23.31■■□□□ 1.32
SSBP3-216ENST00000610401 ANKRD18BA2A2Z9 1011 aa23.3■■□□□ 1.32
SSBP3-216ENST00000610401 TBC1D8O95759 1140 aa23.3■■□□□ 1.32
SSBP3-216ENST00000610401 KIF4BQ2VIQ3 1234 aa23.3■■□□□ 1.32
SSBP3-216ENST00000610401 EARS2Q5JPH6 523 aaKnown RBP23.3■■□□□ 1.32
SSBP3-216ENST00000610401 TRIM22Q8IYM9 498 aa23.3■■□□□ 1.32
SSBP3-216ENST00000610401 VPS16Q9H269 839 aa23.3■■□□□ 1.32
SSBP3-216ENST00000610401 TMOD3Q9NYL9 352 aa23.3■■□□□ 1.32
SSBP3-216ENST00000610401 PHLPP2Q6ZVD8 1323 aa23.3■■□□□ 1.32
SSBP3-216ENST00000610401 WNT7AO00755 349 aa23.3■■□□□ 1.32
SSBP3-216ENST00000610401 IGSF22Q8N9C0 903 aa23.3■■□□□ 1.32
SSBP3-216ENST00000610401 ARFGAP3Q9NP61 516 aa23.3■■□□□ 1.32
SSBP3-216ENST00000610401 ANKRD65E5RJM6 399 aa23.3■■□□□ 1.32
SSBP3-216ENST00000610401 PPP6R2O75170 966 aa23.3■■□□□ 1.32
SSBP3-216ENST00000610401 BCAMP50895 628 aa23.3■■□□□ 1.32
SSBP3-216ENST00000610401 CC2D1AQ6P1N0 951 aaPredicted RBP23.3■■□□□ 1.32
SSBP3-216ENST00000610401 PPFIBP1Q86W92 1011 aa23.3■■□□□ 1.32
SSBP3-216ENST00000610401 RAI14Q9P0K7 980 aa23.3■■□□□ 1.32
SSBP3-216ENST00000610401 LCORLQ8N3X6 602 aa23.29■■□□□ 1.32
SSBP3-216ENST00000610401 STRBPQ96SI9 672 aaKnown RBP23.29■■□□□ 1.32
SSBP3-216ENST00000610401 PLIN2Q99541 437 aa23.29■■□□□ 1.32
SSBP3-216ENST00000610401 A0A087X0B3 334 aa23.29■■□□□ 1.32
SSBP3-216ENST00000610401 EFCAB8A8MWE9 144 aa23.29■■□□□ 1.32
SSBP3-216ENST00000610401 WTAPQ15007 396 aa23.29■■□□□ 1.32
SSBP3-216ENST00000610401 RAD9BQ6WBX8 426 aa23.29■■□□□ 1.32
SSBP3-216ENST00000610401 RIPOR2Q9Y4F9 1068 aa23.29■■□□□ 1.32
SSBP3-216ENST00000610401 CCP110O43303 1012 aa23.28■■□□□ 1.32
SSBP3-216ENST00000610401 N4BP1O75113 896 aaKnown RBP23.28■■□□□ 1.32
SSBP3-216ENST00000610401 CD44P16070 742 aaKnown RBP23.28■■□□□ 1.32
SSBP3-216ENST00000610401 CASP14P31944 242 aa23.28■■□□□ 1.32
SSBP3-216ENST00000610401 LRP2BPQ9P2M1 347 aa23.28■■□□□ 1.32
SSBP3-216ENST00000610401 ERICH2A1L162 156 aa23.28■■□□□ 1.32
SSBP3-216ENST00000610401 ZRANB2O95218 330 aaKnown RBP eCLIP23.28■■□□□ 1.324e-7■■■□□ 14.7
SSBP3-216ENST00000610401 JAG2Q9Y219 1238 aa23.28■■□□□ 1.32
SSBP3-216ENST00000610401 PLEKHA4Q9H4M7 779 aa23.27■■□□□ 1.32
SSBP3-216ENST00000610401 CPDO75976 1380 aa23.27■■□□□ 1.32
SSBP3-216ENST00000610401 AKAP17AQ02040 695 aaKnown RBP23.27■■□□□ 1.32
SSBP3-216ENST00000610401 CYP2C19P33261 490 aa23.26■■□□□ 1.31
SSBP3-216ENST00000610401 EVX2Q03828 476 aa23.26■■□□□ 1.31
SSBP3-216ENST00000610401 RASGRF1Q13972 1273 aa23.26■■□□□ 1.31
SSBP3-216ENST00000610401 ISCA1Q9BUE6 129 aa23.26■■□□□ 1.31
SSBP3-216ENST00000610401 VPS18Q9P253 973 aa23.26■■□□□ 1.31
SSBP3-216ENST00000610401 MMP1P03956 469 aa23.26■■□□□ 1.31
SSBP3-216ENST00000610401 ZBTB38Q8NAP3 1195 aaPredicted RBP23.26■■□□□ 1.31
SSBP3-216ENST00000610401 HOOK1Q9UJC3 728 aaKnown RBP23.26■■□□□ 1.31
SSBP3-216ENST00000610401 FBXO2Q9UK22 296 aaPredicted RBP23.26■■□□□ 1.31
SSBP3-216ENST00000610401 FAM53CQ9NYF3 392 aa23.26■■□□□ 1.31
SSBP3-216ENST00000610401 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.26■■□□□ 1.316e-7■■□□□ 12.6
SSBP3-216ENST00000610401 V9GY48 417 aaPredicted RBP23.26■■□□□ 1.31
SSBP3-216ENST00000610401 AKR1B15C9JRZ8 316 aaPredicted RBP23.25■■□□□ 1.31
SSBP3-216ENST00000610401 UBAC1Q9BSL1 405 aa23.25■■□□□ 1.31
SSBP3-216ENST00000610401 PDE11AQ9HCR9 933 aa23.25■■□□□ 1.31
SSBP3-216ENST00000610401 ZKSCAN7Q9P0L1 754 aaPredicted RBP23.25■■□□□ 1.31
SSBP3-216ENST00000610401 CTNND2Q9UQB3 1225 aa23.25■■□□□ 1.31
SSBP3-216ENST00000610401 MRFAP1Q9Y605 127 aa23.25■■□□□ 1.31
SSBP3-216ENST00000610401 PDE8BO95263 885 aa23.25■■□□□ 1.31
SSBP3-216ENST00000610401 TRIM10Q9UDY6 481 aa23.25■■□□□ 1.31
SSBP3-216ENST00000610401 H3BQF6 201 aa23.24■■□□□ 1.31
SSBP3-216ENST00000610401 ENC1O14682 589 aa23.24■■□□□ 1.31
SSBP3-216ENST00000610401 CHMP4BP1P59074 171 aa23.24■■□□□ 1.31
SSBP3-216ENST00000610401 MAP3K9P80192 1104 aa23.24■■□□□ 1.31
SSBP3-216ENST00000610401 MDM2Q00987 491 aaPredicted RBP23.24■■□□□ 1.31
SSBP3-216ENST00000610401 KIF13AQ9H1H9 1805 aa23.24■■□□□ 1.31
SSBP3-216ENST00000610401 OVOS2A0A0G2JMS6 1433 aa23.24■■□□□ 1.31
SSBP3-216ENST00000610401 CCDC175P0C221 793 aa23.24■■□□□ 1.31
SSBP3-216ENST00000610401 LONRF2Q1L5Z9 754 aa23.24■■□□□ 1.31
SSBP3-216ENST00000610401 SPATA5Q8NB90 893 aa23.24■■□□□ 1.31
SSBP3-216ENST00000610401 TMEM51Q9NW97 253 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms