RNA–Protein interactions for RNA: ENST00000608108.1

CTCFL-214, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 1,628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-214ENST00000608108 RALYLQ86SE5 291 aaKnown RBP13.19□□□□□ -0.3
CTCFL-214ENST00000608108 TTC6Q86TZ1 520 aa13.19□□□□□ -0.3
CTCFL-214ENST00000608108 ZSCAN29Q8IWY8 852 aaPredicted RBP13.19□□□□□ -0.3
CTCFL-214ENST00000608108 NCOA7Q8NI08 942 aa13.19□□□□□ -0.3
CTCFL-214ENST00000608108 NEK1Q96PY6 1258 aa13.19□□□□□ -0.3
CTCFL-214ENST00000608108 DHX36Q9H2U1 1008 aaKnown RBP13.19□□□□□ -0.3
CTCFL-214ENST00000608108 CNTNAP1P78357 1384 aa13.18□□□□□ -0.3
CTCFL-214ENST00000608108 ATRNL1Q5VV63 1379 aa13.18□□□□□ -0.3
CTCFL-214ENST00000608108 CPA1P15085 419 aa13.18□□□□□ -0.3
CTCFL-214ENST00000608108 ANP32AP39687 249 aaKnown RBP13.18□□□□□ -0.3
CTCFL-214ENST00000608108 TNNI2P48788 182 aa13.18□□□□□ -0.3
CTCFL-214ENST00000608108 HIRAP54198 1017 aaPredicted RBP13.18□□□□□ -0.3
CTCFL-214ENST00000608108 TNFAIP1Q13829 316 aa13.18□□□□□ -0.3
CTCFL-214ENST00000608108 BLOC1S2Q6QNY1 142 aa13.18□□□□□ -0.3
CTCFL-214ENST00000608108 FAM83AQ86UY5 434 aa13.18□□□□□ -0.3
CTCFL-214ENST00000608108 FAM151AQ8WW52 585 aa13.18□□□□□ -0.3
CTCFL-214ENST00000608108 CNNM2Q9H8M5 875 aa13.18□□□□□ -0.3
CTCFL-214ENST00000608108 ZSWIM6Q9HCJ5 1215 aa13.18□□□□□ -0.3
CTCFL-214ENST00000608108 INCENPQ9NQS7 918 aa13.18□□□□□ -0.3
CTCFL-214ENST00000608108 TOMM22Q9NS69 142 aa13.18□□□□□ -0.3
CTCFL-214ENST00000608108 CYP46A1Q9Y6A2 500 aa13.18□□□□□ -0.3
CTCFL-214ENST00000608108 TACC3Q9Y6A5 838 aa13.18□□□□□ -0.3
CTCFL-214ENST00000608108 IQCA1LA6NCM1 817 aa13.17□□□□□ -0.3
CTCFL-214ENST00000608108 DDTLA6NHG4 134 aaPredicted RBP13.17□□□□□ -0.3
CTCFL-214ENST00000608108 HMGB1P09429 215 aaKnown RBP13.17□□□□□ -0.3
CTCFL-214ENST00000608108 PCP11498 1178 aaKnown RBP13.17□□□□□ -0.3
CTCFL-214ENST00000608108 EPHX2P34913 555 aa13.17□□□□□ -0.3
CTCFL-214ENST00000608108 NEK4P51957 841 aa13.17□□□□□ -0.3
CTCFL-214ENST00000608108 PDE4BQ07343 736 aa13.17□□□□□ -0.3
CTCFL-214ENST00000608108 COL9A3Q14050 684 aaPredicted RBP13.17□□□□□ -0.3
CTCFL-214ENST00000608108 ANGEL2Q5VTE6 544 aaKnown RBP13.17□□□□□ -0.3
CTCFL-214ENST00000608108 RUFY3Q7L099 469 aa13.17□□□□□ -0.3
CTCFL-214ENST00000608108 SH3BP5LQ7L8J4 393 aa13.17□□□□□ -0.3
CTCFL-214ENST00000608108 DYNLL2Q96FJ2 89 aa13.17□□□□□ -0.3
CTCFL-214ENST00000608108 KRT23Q9C075 422 aa13.17□□□□□ -0.3
CTCFL-214ENST00000608108 TMEM39BQ9GZU3 492 aa13.17□□□□□ -0.3
CTCFL-214ENST00000608108 GGA3Q9NZ52 723 aa13.17□□□□□ -0.3
CTCFL-214ENST00000608108 SCAF8Q9UPN6 1271 aaKnown RBP13.17□□□□□ -0.3
CTCFL-214ENST00000608108 ST18O60284 1047 aa13.17□□□□□ -0.3
CTCFL-214ENST00000608108 PRDM1O75626 825 aa13.17□□□□□ -0.3
CTCFL-214ENST00000608108 FGRP09769 529 aa13.17□□□□□ -0.3
CTCFL-214ENST00000608108 RPS6KB1P23443 525 aa13.17□□□□□ -0.3
CTCFL-214ENST00000608108 RRP12Q5JTH9 1297 aaKnown RBP13.17□□□□□ -0.3
CTCFL-214ENST00000608108 C16orf86Q6ZW13 317 aa13.17□□□□□ -0.3
CTCFL-214ENST00000608108 APOBEC3FQ8IUX4 373 aaKnown RBP13.17□□□□□ -0.3
CTCFL-214ENST00000608108 CSRNP1Q96S65 589 aa13.17□□□□□ -0.3
CTCFL-214ENST00000608108 EHD4Q9H223 541 aa13.17□□□□□ -0.3
CTCFL-214ENST00000608108 SERPINB13Q9UIV8 391 aa13.17□□□□□ -0.3
CTCFL-214ENST00000608108 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.17□□□□□ -0.3
CTCFL-214ENST00000608108 B4E1Z4 1266 aa13.16□□□□□ -0.3
CTCFL-214ENST00000608108 ORC4O43929 436 aa13.16□□□□□ -0.3
CTCFL-214ENST00000608108 RASA3Q14644 834 aa13.16□□□□□ -0.3
CTCFL-214ENST00000608108 USP50Q70EL3 339 aaPredicted RBP13.16□□□□□ -0.3
CTCFL-214ENST00000608108 DHX32Q7L7V1 743 aaKnown RBP13.16□□□□□ -0.3
CTCFL-214ENST00000608108 MB21D2Q8IYB1 491 aaPredicted RBP13.16□□□□□ -0.3
CTCFL-214ENST00000608108 SLC44A5Q8NCS7 719 aa13.16□□□□□ -0.3
CTCFL-214ENST00000608108 ESR2Q92731 530 aa13.16□□□□□ -0.3
CTCFL-214ENST00000608108 TCEANC2Q96MN5 208 aa13.16□□□□□ -0.3
CTCFL-214ENST00000608108 ZNF287Q9HBT7 754 aa13.16□□□□□ -0.3
CTCFL-214ENST00000608108 PI4KBQ9UBF8 816 aa13.16□□□□□ -0.3
CTCFL-214ENST00000608108 POTECB2RU33 542 aa13.15□□□□□ -0.3
CTCFL-214ENST00000608108 KDM4AO75164 1064 aa13.15□□□□□ -0.3
CTCFL-214ENST00000608108 MCM5P33992 734 aa13.15□□□□□ -0.3
CTCFL-214ENST00000608108 GABPAQ06546 454 aa13.15□□□□□ -0.3
CTCFL-214ENST00000608108 CRACR2BQ8N4Y2 399 aaPredicted RBP13.15□□□□□ -0.3
CTCFL-214ENST00000608108 NKX2-3Q8TAU0 364 aa13.15□□□□□ -0.3
CTCFL-214ENST00000608108 TRIM34Q9BYJ4 488 aa13.15□□□□□ -0.3
CTCFL-214ENST00000608108 DEFB129Q9H1M3 183 aa13.15□□□□□ -0.3
CTCFL-214ENST00000608108 TAF1DQ9H5J8 278 aaPredicted RBP13.15□□□□□ -0.3
CTCFL-214ENST00000608108 MKNK2Q9HBH9 465 aa13.15□□□□□ -0.3
CTCFL-214ENST00000608108 PDRG1Q9NUG6 133 aa13.15□□□□□ -0.3
CTCFL-214ENST00000608108 SWAP70Q9UH65 585 aa13.15□□□□□ -0.3
CTCFL-214ENST00000608108 PITPNM2Q9BZ72 1349 aa13.14□□□□□ -0.31
CTCFL-214ENST00000608108 RANBP6O60518 1105 aaKnown RBP13.14□□□□□ -0.31
CTCFL-214ENST00000608108 CD2BP2O95400 341 aaKnown RBP13.14□□□□□ -0.31
CTCFL-214ENST00000608108 CDK8P49336 464 aa13.14□□□□□ -0.31
CTCFL-214ENST00000608108 CHST3Q7LGC8 479 aa13.14□□□□□ -0.31
CTCFL-214ENST00000608108 PNMA8AQ86V59 439 aaPredicted RBP13.14□□□□□ -0.31
CTCFL-214ENST00000608108 CDAN1Q8IWY9 1227 aa13.14□□□□□ -0.31
CTCFL-214ENST00000608108 IL27Q8NEV9 243 aa13.14□□□□□ -0.31
CTCFL-214ENST00000608108 TTC14Q96N46 770 aa13.14□□□□□ -0.31
CTCFL-214ENST00000608108 WDR19Q8NEZ3 1342 aa13.14□□□□□ -0.31
CTCFL-214ENST00000608108 PRC1O43663 620 aa13.13□□□□□ -0.31
CTCFL-214ENST00000608108 ATXN8OSP0DMR3 200 aa13.13□□□□□ -0.31
CTCFL-214ENST00000608108 ANTXR2P58335 489 aa13.13□□□□□ -0.31
CTCFL-214ENST00000608108 FGD1P98174 961 aa13.13□□□□□ -0.31
CTCFL-214ENST00000608108 EXOSC10Q01780 885 aaKnown RBP13.13□□□□□ -0.31
CTCFL-214ENST00000608108 EAPPQ56P03 285 aaPredicted RBP13.13□□□□□ -0.31
CTCFL-214ENST00000608108 CYB5R4Q7L1T6 521 aa13.13□□□□□ -0.31
CTCFL-214ENST00000608108 DCPSQ96C86 337 aaKnown RBP13.13□□□□□ -0.31
CTCFL-214ENST00000608108 LRRC2Q9BYS8 371 aa13.13□□□□□ -0.31
CTCFL-214ENST00000608108 DNAJC18Q9H819 358 aa13.13□□□□□ -0.31
CTCFL-214ENST00000608108 TAOK2Q9UL54 1235 aa13.13□□□□□ -0.31
CTCFL-214ENST00000608108 TSPY2A6NKD2 308 aa13.13□□□□□ -0.31
CTCFL-214ENST00000608108 FAM196BA6NMK8 535 aa13.13□□□□□ -0.31
CTCFL-214ENST00000608108 RASA1P20936 1047 aa13.13□□□□□ -0.31
CTCFL-214ENST00000608108 NT5C2P49902 561 aa13.13□□□□□ -0.31
CTCFL-214ENST00000608108 AK2P54819 239 aa13.13□□□□□ -0.31
CTCFL-214ENST00000608108 Q6ZUG5 572 aa13.13□□□□□ -0.31
CTCFL-214ENST00000608108 FOXP4Q8IVH2 680 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms