RNA–Protein interactions for RNA: ENST00000607559.1

TPM2-208, Transcript of tropomyosin 2, human

TSL 2

Gene TPM2, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM2-208	ENST00000607559	OTOF	Q9HC10	1997 aa		13.12	□□□□□ -0.31
TPM2-208	ENST00000607559	TTLL13P	A6NNM8	815 aa		13.12	□□□□□ -0.31
TPM2-208	ENST00000607559	BTBD19	C9JJ37	291 aa		13.12	□□□□□ -0.31
TPM2-208	ENST00000607559	TLR2	O60603	784 aa		13.12	□□□□□ -0.31
TPM2-208	ENST00000607559	RAB11FIP3	O75154	756 aa		13.12	□□□□□ -0.31
TPM2-208	ENST00000607559	HMMR	O75330	724 aa		13.12	□□□□□ -0.31
TPM2-208	ENST00000607559	PLCG2	P16885	1265 aa		13.12	□□□□□ -0.31
TPM2-208	ENST00000607559	SP3	Q02447	781 aa		13.12	□□□□□ -0.31
TPM2-208	ENST00000607559	ANKRD23	Q86SG2	305 aa		13.12	□□□□□ -0.31
TPM2-208	ENST00000607559	CERS3	Q8IU89	383 aa		13.12	□□□□□ -0.31
TPM2-208	ENST00000607559	RHPN1	Q8TCX5	695 aa		13.12	□□□□□ -0.31
TPM2-208	ENST00000607559	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	13.12	□□□□□ -0.31
TPM2-208	ENST00000607559	KIF1BP	Q96EK5	621 aa		13.12	□□□□□ -0.31
TPM2-208	ENST00000607559	ERO1A	Q96HE7	468 aa		13.12	□□□□□ -0.31
TPM2-208	ENST00000607559	ZFYVE28	Q9HCC9	887 aa		13.12	□□□□□ -0.31
TPM2-208	ENST00000607559	RAI14	Q9P0K7	980 aa		13.12	□□□□□ -0.31
TPM2-208	ENST00000607559	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	13.12	□□□□□ -0.31
TPM2-208	ENST00000607559	COG6	Q9Y2V7	657 aa		13.12	□□□□□ -0.31
TPM2-208	ENST00000607559	HTT	P42858	3142 aa		13.12	□□□□□ -0.31
TPM2-208	ENST00000607559	BAG3	O95817	575 aa		13.11	□□□□□ -0.31
TPM2-208	ENST00000607559	PTPRA	P18433	802 aa		13.11	□□□□□ -0.31
TPM2-208	ENST00000607559	ZAP70	P43403	619 aa		13.11	□□□□□ -0.31
TPM2-208	ENST00000607559	NAA16	Q6N069	864 aa	Predicted RBP	13.11	□□□□□ -0.31
TPM2-208	ENST00000607559	OTOP1	Q7RTM1	612 aa		13.11	□□□□□ -0.31
TPM2-208	ENST00000607559	SCYL3	Q8IZE3	742 aa		13.11	□□□□□ -0.31
TPM2-208	ENST00000607559	CCDC8	Q9H0W5	538 aa	Predicted RBP	13.11	□□□□□ -0.31
TPM2-208	ENST00000607559	DHX36	Q9H2U1	1008 aa	Known RBP	13.11	□□□□□ -0.31
TPM2-208	ENST00000607559	SNRK	Q9NRH2	765 aa		13.11	□□□□□ -0.31
TPM2-208	ENST00000607559	TLR7	Q9NYK1	1049 aa	Known RBP	13.11	□□□□□ -0.31
TPM2-208	ENST00000607559	EXOC6B	Q9Y2D4	811 aa		13.11	□□□□□ -0.31
TPM2-208	ENST00000607559	AFG3L2	Q9Y4W6	797 aa		13.11	□□□□□ -0.31
TPM2-208	ENST00000607559	MYH2	Q9UKX2	1941 aa		13.1	□□□□□ -0.31
TPM2-208	ENST00000607559	C17orf99	Q6UX52	265 aa		13.1	□□□□□ -0.31
TPM2-208	ENST00000607559	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	13.1	□□□□□ -0.31
TPM2-208	ENST00000607559	OSBPL5	Q9H0X9	879 aa	Predicted RBP	13.1	□□□□□ -0.31
TPM2-208	ENST00000607559	PIH1D3	Q9NQM4	214 aa	Known RBP	13.1	□□□□□ -0.31
TPM2-208	ENST00000607559	HERC5	Q9UII4	1024 aa	Known RBP	13.1	□□□□□ -0.31
TPM2-208	ENST00000607559	SLC45A1	Q9Y2W3	748 aa		13.1	□□□□□ -0.31
TPM2-208	ENST00000607559	TRIM17	Q9Y577	477 aa		13.1	□□□□□ -0.31
TPM2-208	ENST00000607559		A0A0G2JLL6	359 aa	Predicted RBP	13.09	□□□□□ -0.31
TPM2-208	ENST00000607559	ARHGEF6	Q15052	776 aa		13.09	□□□□□ -0.31
TPM2-208	ENST00000607559	TAF1C	Q15572	869 aa	Predicted RBP	13.09	□□□□□ -0.31
TPM2-208	ENST00000607559	GPAT2	Q6NUI2	795 aa		13.09	□□□□□ -0.31
TPM2-208	ENST00000607559	PRRT2	Q7Z6L0	340 aa	Predicted RBP	13.09	□□□□□ -0.31
TPM2-208	ENST00000607559	ADGRA1	Q86SQ6	560 aa		13.09	□□□□□ -0.31
TPM2-208	ENST00000607559	FOXP4	Q8IVH2	680 aa	Predicted RBP	13.09	□□□□□ -0.31
TPM2-208	ENST00000607559	TBC1D2	Q9BYX2	928 aa		13.09	□□□□□ -0.31
TPM2-208	ENST00000607559	PI4KB	Q9UBF8	816 aa		13.09	□□□□□ -0.31
TPM2-208	ENST00000607559	ADGRA2	Q96PE1	1338 aa		13.09	□□□□□ -0.31
TPM2-208	ENST00000607559	SLC34A2	O95436	690 aa		13.08	□□□□□ -0.32
TPM2-208	ENST00000607559	GNRH1	P01148	92 aa		13.08	□□□□□ -0.32
TPM2-208	ENST00000607559	PSEN1	P49768	467 aa		13.08	□□□□□ -0.32
TPM2-208	ENST00000607559	CAP1	Q01518	475 aa		13.08	□□□□□ -0.32
TPM2-208	ENST00000607559	C20orf194	Q5TEA3	1177 aa		13.08	□□□□□ -0.32
TPM2-208	ENST00000607559	FASTKD5	Q7L8L6	764 aa	Known RBP	13.08	□□□□□ -0.32
TPM2-208	ENST00000607559	AACS	Q86V21	672 aa		13.08	□□□□□ -0.32
TPM2-208	ENST00000607559	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	13.08	□□□□□ -0.32
TPM2-208	ENST00000607559	TEX11	Q8IYF3	940 aa		13.08	□□□□□ -0.32
TPM2-208	ENST00000607559	CLASRP	Q8N2M8	674 aa	Known RBP	13.08	□□□□□ -0.32
TPM2-208	ENST00000607559	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	13.08	□□□□□ -0.32
TPM2-208	ENST00000607559	RNF25	Q96BH1	459 aa	Predicted RBP	13.08	□□□□□ -0.32
TPM2-208	ENST00000607559	GINM1	Q9NU53	330 aa		13.08	□□□□□ -0.32
TPM2-208	ENST00000607559	PTPN22	Q9Y2R2	807 aa		13.08	□□□□□ -0.32
TPM2-208	ENST00000607559	ZHX2	Q9Y6X8	837 aa		13.08	□□□□□ -0.32
TPM2-208	ENST00000607559	CENPF	P49454	3210 aa		13.07	□□□□□ -0.32
TPM2-208	ENST00000607559	RIOK3	O14730	519 aa	Known RBP	13.07	□□□□□ -0.32
TPM2-208	ENST00000607559	CAP2	P40123	477 aa		13.07	□□□□□ -0.32
TPM2-208	ENST00000607559	PICALM	Q13492	652 aa		13.07	□□□□□ -0.32
TPM2-208	ENST00000607559	TTF1	Q15361	905 aa	Predicted RBP	13.07	□□□□□ -0.32
TPM2-208	ENST00000607559	NOL10	Q9BSC4	688 aa	Known RBP	13.07	□□□□□ -0.32
TPM2-208	ENST00000607559	EFCC1	Q9HA90	598 aa		13.07	□□□□□ -0.32
TPM2-208	ENST00000607559	PICK1	Q9NRD5	415 aa		13.07	□□□□□ -0.32
TPM2-208	ENST00000607559	AATF	Q9NY61	560 aa	Known RBP eCLIP	13.07	□□□□□ -0.32
TPM2-208	ENST00000607559	PDHX	O00330	501 aa		13.06	□□□□□ -0.32
TPM2-208	ENST00000607559	ATP5J	P18859	108 aa		13.06	□□□□□ -0.32
TPM2-208	ENST00000607559	LACTB	P83111	547 aa	Predicted RBP	13.06	□□□□□ -0.32
TPM2-208	ENST00000607559	MAP3K12	Q12852	859 aa		13.06	□□□□□ -0.32
TPM2-208	ENST00000607559	PDAP1	Q13442	181 aa	Known RBP	13.06	□□□□□ -0.32
TPM2-208	ENST00000607559	CD99L2	Q8TCZ2	262 aa		13.06	□□□□□ -0.32
TPM2-208	ENST00000607559	ARMC5	Q96C12	935 aa		13.06	□□□□□ -0.32
TPM2-208	ENST00000607559	ANTXR1	Q9H6X2	564 aa		13.06	□□□□□ -0.32
TPM2-208	ENST00000607559	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	13.06	□□□□□ -0.32
TPM2-208	ENST00000607559	IL1RAPL2	Q9NP60	686 aa		13.06	□□□□□ -0.32
TPM2-208	ENST00000607559	CEP290	O15078	2479 aa		13.05	□□□□□ -0.32
TPM2-208	ENST00000607559	SLURP2	P0DP57	97 aa		13.05	□□□□□ -0.32
TPM2-208	ENST00000607559	BCR	P11274	1271 aa		13.05	□□□□□ -0.32
TPM2-208	ENST00000607559	CYP7A1	P22680	504 aa		13.05	□□□□□ -0.32
TPM2-208	ENST00000607559	PRMT2	P55345	433 aa		13.05	□□□□□ -0.32
TPM2-208	ENST00000607559	RRP1B	Q14684	758 aa	Known RBP	13.05	□□□□□ -0.32
TPM2-208	ENST00000607559	SH3D19	Q5HYK7	790 aa		13.05	□□□□□ -0.32
TPM2-208	ENST00000607559	PRPF38B	Q5VTL8	546 aa	Known RBP	13.05	□□□□□ -0.32
TPM2-208	ENST00000607559	TGFBRAP1	Q8WUH2	860 aa		13.05	□□□□□ -0.32
TPM2-208	ENST00000607559	RIOK1	Q9BRS2	568 aa	Known RBP	13.05	□□□□□ -0.32
TPM2-208	ENST00000607559	WDR18	Q9BV38	432 aa		13.05	□□□□□ -0.32
TPM2-208	ENST00000607559	DCTPP1	Q9H773	170 aa		13.05	□□□□□ -0.32
TPM2-208	ENST00000607559	TAOK2	Q9UL54	1235 aa		13.05	□□□□□ -0.32
TPM2-208	ENST00000607559	FLT1	P17948	1338 aa		13.05	□□□□□ -0.32
TPM2-208	ENST00000607559	IDH1	O75874	414 aa	Known RBP	13.04	□□□□□ -0.32
TPM2-208	ENST00000607559	PROCA1	Q8NCQ7	364 aa	Predicted RBP	13.04	□□□□□ -0.32
TPM2-208	ENST00000607559	EHD4	Q9H223	541 aa		13.04	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms