RNA–Protein interactions for RNA: ENST00000605833.1

VIM-AS1-202, VIM antisense RNA 1, humanhuman

TSL 3 BASIC

Gene VIM-AS1, Length 918 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-AS1-202ENST00000605833 NSUN4Q96CB9 384 aaKnown RBP25.75■■□□□ 1.71
VIM-AS1-202ENST00000605833 GORABQ5T7V8 394 aa25.74■■□□□ 1.71
VIM-AS1-202ENST00000605833 RAI14Q9P0K7 980 aa25.74■■□□□ 1.71
VIM-AS1-202ENST00000605833 ALPK3Q96L96 1907 aa25.74■■□□□ 1.71
VIM-AS1-202ENST00000605833 CDK5RAP2Q96SN8 1893 aa25.74■■□□□ 1.71
VIM-AS1-202ENST00000605833 COL2A1P02458 1487 aaPredicted RBP25.73■■□□□ 1.71
VIM-AS1-202ENST00000605833 TBC1D12O60347 775 aa25.73■■□□□ 1.71
VIM-AS1-202ENST00000605833 SGPL1O95470 568 aa25.73■■□□□ 1.71
VIM-AS1-202ENST00000605833 SPP2Q13103 211 aa25.73■■□□□ 1.71
VIM-AS1-202ENST00000605833 RRP1BQ14684 758 aaKnown RBP25.73■■□□□ 1.71
VIM-AS1-202ENST00000605833 DEFB118Q96PH6 123 aa25.73■■□□□ 1.71
VIM-AS1-202ENST00000605833 OSBPL5Q9H0X9 879 aaPredicted RBP25.73■■□□□ 1.71
VIM-AS1-202ENST00000605833 ARID4AP29374 1257 aaPredicted RBP25.72■■□□□ 1.71
VIM-AS1-202ENST00000605833 GSTO1P78417 241 aa25.72■■□□□ 1.71
VIM-AS1-202ENST00000605833 IRF5Q13568 498 aa25.72■■□□□ 1.71
VIM-AS1-202ENST00000605833 PXYLP1Q8TE99 480 aa25.72■■□□□ 1.71
VIM-AS1-202ENST00000605833 PNMA3Q9UL41 463 aa25.72■■□□□ 1.71
VIM-AS1-202ENST00000605833 MYO5AQ9Y4I1 1855 aaKnown RBP25.71■■□□□ 1.71
VIM-AS1-202ENST00000605833 PNMA6EA0A0J9YXQ4 647 aa25.71■■□□□ 1.71
VIM-AS1-202ENST00000605833 NPM3O75607 178 aaKnown RBP25.71■■□□□ 1.71
VIM-AS1-202ENST00000605833 MCAMP43121 646 aa25.71■■□□□ 1.71
VIM-AS1-202ENST00000605833 HMGCS2P54868 508 aa25.71■■□□□ 1.71
VIM-AS1-202ENST00000605833 FAM110CQ1W6H9 321 aa25.71■■□□□ 1.71
VIM-AS1-202ENST00000605833 ARHGAP45Q92619 1136 aa25.71■■□□□ 1.71
VIM-AS1-202ENST00000605833 COA7Q96BR5 231 aa25.71■■□□□ 1.71
VIM-AS1-202ENST00000605833 LDHCP07864 332 aa25.7■■□□□ 1.7
VIM-AS1-202ENST00000605833 TRIM27P14373 513 aa25.7■■□□□ 1.7
VIM-AS1-202ENST00000605833 TEX11Q8IYF3 940 aa25.7■■□□□ 1.7
VIM-AS1-202ENST00000605833 PROCA1Q8NCQ7 364 aaPredicted RBP25.7■■□□□ 1.7
VIM-AS1-202ENST00000605833 ZNF280CQ8ND82 737 aa25.7■■□□□ 1.7
VIM-AS1-202ENST00000605833 SH3RF3Q8TEJ3 882 aaPredicted RBP25.7■■□□□ 1.7
VIM-AS1-202ENST00000605833 FOCADQ5VW36 1801 aa25.7■■□□□ 1.7
VIM-AS1-202ENST00000605833 ZBTB7BO15156 539 aaPredicted RBP25.69■■□□□ 1.7
VIM-AS1-202ENST00000605833 TFRCP02786 760 aaKnown RBP25.69■■□□□ 1.7
VIM-AS1-202ENST00000605833 PAK6Q9NQU5 681 aaPredicted RBP25.69■■□□□ 1.7
VIM-AS1-202ENST00000605833 NR2E3Q9Y5X4 410 aa25.69■■□□□ 1.7
VIM-AS1-202ENST00000605833 PLXNB2O15031 1838 aa25.69■■□□□ 1.7
VIM-AS1-202ENST00000605833 GNAI2P04899 355 aa25.68■■□□□ 1.7
VIM-AS1-202ENST00000605833 CAP2P40123 477 aa25.68■■□□□ 1.7
VIM-AS1-202ENST00000605833 PRO3102Q9H379 93 aa25.68■■□□□ 1.7
VIM-AS1-202ENST00000605833 SNRKQ9NRH2 765 aa25.68■■□□□ 1.7
VIM-AS1-202ENST00000605833 LRP2BPQ9P2M1 347 aa25.68■■□□□ 1.7
VIM-AS1-202ENST00000605833 G3BP1Q13283 466 aaKnown RBP eCLIP25.67■■□□□ 1.7
VIM-AS1-202ENST00000605833 FRAT1Q92837 279 aaPredicted RBP25.67■■□□□ 1.7
VIM-AS1-202ENST00000605833 CLUAP1Q96AJ1 413 aa25.67■■□□□ 1.7
VIM-AS1-202ENST00000605833 USP17L5A8MUK1 530 aa25.66■■□□□ 1.7
VIM-AS1-202ENST00000605833 MAP4K4O95819 1239 aaPredicted RBP25.66■■□□□ 1.7
VIM-AS1-202ENST00000605833 DIS3LQ8TF46 1054 aaKnown RBP25.66■■□□□ 1.7
VIM-AS1-202ENST00000605833 ASCC2Q9H1I8 757 aaPredicted RBP25.66■■□□□ 1.7
VIM-AS1-202ENST00000605833 AATFQ9NY61 560 aaKnown RBP eCLIP25.66■■□□□ 1.7
VIM-AS1-202ENST00000605833 EVI5O60447 810 aa25.65■■□□□ 1.7
VIM-AS1-202ENST00000605833 BCAR3O75815 825 aa25.65■■□□□ 1.7
VIM-AS1-202ENST00000605833 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.65■■□□□ 1.7
VIM-AS1-202ENST00000605833 UQCRFS1P1P0C7P4 283 aa25.64■■□□□ 1.7
VIM-AS1-202ENST00000605833 GCLCP48506 637 aaPredicted RBP25.64■■□□□ 1.7
VIM-AS1-202ENST00000605833 TRIM32Q13049 653 aa25.64■■□□□ 1.7
VIM-AS1-202ENST00000605833 PABPC4Q13310 644 aaKnown RBP eCLIP25.64■■□□□ 1.7
VIM-AS1-202ENST00000605833 MTMR2Q13614 643 aa25.64■■□□□ 1.7
VIM-AS1-202ENST00000605833 SHROOM1Q2M3G4 852 aaPredicted RBP25.64■■□□□ 1.7
VIM-AS1-202ENST00000605833 ATF7IPQ6VMQ6 1270 aa25.64■■□□□ 1.7
VIM-AS1-202ENST00000605833 PAWRQ96IZ0 340 aaKnown RBP25.64■■□□□ 1.7
VIM-AS1-202ENST00000605833 NOL10Q9BSC4 688 aaKnown RBP25.64■■□□□ 1.7
VIM-AS1-202ENST00000605833 CRISPLD2Q9H0B8 497 aa25.64■■□□□ 1.7
VIM-AS1-202ENST00000605833 HERC5Q9UII4 1024 aaKnown RBP25.64■■□□□ 1.7
VIM-AS1-202ENST00000605833 DDX60LQ5H9U9 1706 aaKnown RBP25.63■■□□□ 1.69
VIM-AS1-202ENST00000605833 PEX10O60683 326 aa25.63■■□□□ 1.69
VIM-AS1-202ENST00000605833 JAG1P78504 1218 aa25.63■■□□□ 1.69
VIM-AS1-202ENST00000605833 NAA16Q6N069 864 aaPredicted RBP25.63■■□□□ 1.69
VIM-AS1-202ENST00000605833 ADGRA1Q86SQ6 560 aa25.63■■□□□ 1.69
VIM-AS1-202ENST00000605833 MAPKAPK5Q8IW41 473 aa25.63■■□□□ 1.69
VIM-AS1-202ENST00000605833 TBC1D2Q9BYX2 928 aa25.63■■□□□ 1.69
VIM-AS1-202ENST00000605833 AS3MTQ9HBK9 375 aa25.63■■□□□ 1.69
VIM-AS1-202ENST00000605833 IPO8O15397 1037 aaKnown RBP25.62■■□□□ 1.69
VIM-AS1-202ENST00000605833 HMGCRP04035 888 aa25.62■■□□□ 1.69
VIM-AS1-202ENST00000605833 SH3D19Q5HYK7 790 aa25.62■■□□□ 1.69
VIM-AS1-202ENST00000605833 TTC39AQ5SRH9 613 aa25.62■■□□□ 1.69
VIM-AS1-202ENST00000605833 DBNDD2Q9BQY9 259 aa25.62■■□□□ 1.69
VIM-AS1-202ENST00000605833 DNAJC18Q9H819 358 aa25.62■■□□□ 1.69
VIM-AS1-202ENST00000605833 FLT1P17948 1338 aa25.62■■□□□ 1.69
VIM-AS1-202ENST00000605833 LAMA3Q16787 3333 aa25.62■■□□□ 1.69
VIM-AS1-202ENST00000605833 TGFBRAP1Q8WUH2 860 aa25.61■■□□□ 1.69
VIM-AS1-202ENST00000605833 PI4KBQ9UBF8 816 aa25.61■■□□□ 1.69
VIM-AS1-202ENST00000605833 GJD2Q9UKL4 321 aa25.61■■□□□ 1.69
VIM-AS1-202ENST00000605833 GDF11O95390 407 aa25.6■■□□□ 1.69
VIM-AS1-202ENST00000605833 IRX3P78415 501 aaPredicted RBP25.6■■□□□ 1.69
VIM-AS1-202ENST00000605833 TNNI3KQ59H18 835 aa25.6■■□□□ 1.69
VIM-AS1-202ENST00000605833 TMEM57Q8N5G2 664 aa25.6■■□□□ 1.69
VIM-AS1-202ENST00000605833 FPGT-TNNI3KV9GXZ4 949 aa25.6■■□□□ 1.69
VIM-AS1-202ENST00000605833 BAG3O95817 575 aa25.59■■□□□ 1.69
VIM-AS1-202ENST00000605833 OS9Q13438 667 aaPredicted RBP25.59■■□□□ 1.69
VIM-AS1-202ENST00000605833 CYP2E1P05181 493 aaPredicted RBP25.58■■□□□ 1.69
VIM-AS1-202ENST00000605833 BACE1P56817 501 aa25.58■■□□□ 1.69
VIM-AS1-202ENST00000605833 NECAB2Q7Z6G3 386 aa25.58■■□□□ 1.69
VIM-AS1-202ENST00000605833 CRACR2BQ8N4Y2 399 aaPredicted RBP25.58■■□□□ 1.69
VIM-AS1-202ENST00000605833 TRIB2Q92519 343 aa25.58■■□□□ 1.69
VIM-AS1-202ENST00000605833 WDR18Q9BV38 432 aa25.58■■□□□ 1.69
VIM-AS1-202ENST00000605833 DHX36Q9H2U1 1008 aaKnown RBP25.58■■□□□ 1.69
VIM-AS1-202ENST00000605833 C1orf115Q9H7X2 142 aa25.58■■□□□ 1.69
VIM-AS1-202ENST00000605833 TMOD4Q9NZQ9 345 aa25.58■■□□□ 1.69
VIM-AS1-202ENST00000605833 MORF4L1Q9UBU8 362 aa25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms