RNA–Protein interactions for RNA: ENST00000603651.1

TUBE1-205, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-205ENST00000603651 ETF1P62495 437 aaKnown RBP9.23□□□□□ -0.93
TUBE1-205ENST00000603651 NPAS4Q8IUM7 802 aa9.23□□□□□ -0.93
TUBE1-205ENST00000603651 AGBL5Q8NDL9 886 aa9.23□□□□□ -0.93
TUBE1-205ENST00000603651 ZNF507Q8TCN5 953 aa9.23□□□□□ -0.93
TUBE1-205ENST00000603651 GAL3ST3Q96A11 431 aa9.23□□□□□ -0.93
TUBE1-205ENST00000603651 GZF1Q9H116 711 aaPredicted RBP9.23□□□□□ -0.93
TUBE1-205ENST00000603651 CEACAM5P06731 702 aa9.22□□□□□ -0.93
TUBE1-205ENST00000603651 COL19A1Q14993 1142 aa9.22□□□□□ -0.93
TUBE1-205ENST00000603651 ARMCX6Q7L4S7 300 aa9.22□□□□□ -0.93
TUBE1-205ENST00000603651 STK11IPQ8N1F8 1099 aa9.22□□□□□ -0.93
TUBE1-205ENST00000603651 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.21□□□□□ -0.94
TUBE1-205ENST00000603651 F6X3S4 739 aa9.21□□□□□ -0.94
TUBE1-205ENST00000603651 OXCT1P55809 520 aa9.21□□□□□ -0.94
TUBE1-205ENST00000603651 RING1Q06587 406 aa9.21□□□□□ -0.94
TUBE1-205ENST00000603651 IFI16Q16666 785 aaKnown RBP9.21□□□□□ -0.94
TUBE1-205ENST00000603651 AOC3Q16853 763 aa9.21□□□□□ -0.94
TUBE1-205ENST00000603651 HEXIM2Q96MH2 286 aaKnown RBP9.21□□□□□ -0.94
TUBE1-205ENST00000603651 FBRSQ9HAH7 460 aa9.21□□□□□ -0.94
TUBE1-205ENST00000603651 RNF114Q9Y508 228 aa9.21□□□□□ -0.94
TUBE1-205ENST00000603651 CD8BP10966 210 aa9.2□□□□□ -0.94
TUBE1-205ENST00000603651 LIG3P49916 1009 aa9.2□□□□□ -0.94
TUBE1-205ENST00000603651 TAGLNQ01995 201 aaKnown RBP9.2□□□□□ -0.94
TUBE1-205ENST00000603651 DNAJC14Q6Y2X3 702 aaPredicted RBP9.2□□□□□ -0.94
TUBE1-205ENST00000603651 KCT2Q8NC54 265 aa9.2□□□□□ -0.94
TUBE1-205ENST00000603651 XAGE3Q8WTP9 111 aa9.2□□□□□ -0.94
TUBE1-205ENST00000603651 JARID2Q92833 1246 aaPredicted RBP9.2□□□□□ -0.94
TUBE1-205ENST00000603651 KRTAP9-2Q9BYQ4 174 aa9.2□□□□□ -0.94
TUBE1-205ENST00000603651 GTF2IRD1Q9UHL9 959 aa9.2□□□□□ -0.94
TUBE1-205ENST00000603651 PLAGL2Q9UPG8 496 aa9.2□□□□□ -0.94
TUBE1-205ENST00000603651 CYFIP1Q7L576 1253 aa9.19□□□□□ -0.94
TUBE1-205ENST00000603651 MISP3Q96FF7 219 aa9.19□□□□□ -0.94
TUBE1-205ENST00000603651 HRASLS5Q96KN8 279 aa9.19□□□□□ -0.94
TUBE1-205ENST00000603651 MIPEPQ99797 713 aa9.19□□□□□ -0.94
TUBE1-205ENST00000603651 TMEM265A0A087WTH1 108 aa9.18□□□□□ -0.94
TUBE1-205ENST00000603651 GNAT3A8MTJ3 354 aa9.18□□□□□ -0.94
TUBE1-205ENST00000603651 GRK4P32298 578 aa9.18□□□□□ -0.94
TUBE1-205ENST00000603651 DAB2P98082 770 aa9.18□□□□□ -0.94
TUBE1-205ENST00000603651 NKG7Q16617 165 aa9.18□□□□□ -0.94
TUBE1-205ENST00000603651 SCARA3Q6AZY7 606 aa9.18□□□□□ -0.94
TUBE1-205ENST00000603651 WNT10AQ9GZT5 417 aa9.18□□□□□ -0.94
TUBE1-205ENST00000603651 MIR1-1HGQ9H1L0 117 aa9.18□□□□□ -0.94
TUBE1-205ENST00000603651 TPX2Q9ULW0 747 aaKnown RBP9.18□□□□□ -0.94
TUBE1-205ENST00000603651 TLR6Q9Y2C9 796 aa9.18□□□□□ -0.94
TUBE1-205ENST00000603651 PRKCQQ04759 706 aa9.17□□□□□ -0.94
TUBE1-205ENST00000603651 CCDC27Q2M243 656 aa9.17□□□□□ -0.94
TUBE1-205ENST00000603651 ZNF792Q3KQV3 632 aa9.17□□□□□ -0.94
TUBE1-205ENST00000603651 WFDC3Q8IUB2 231 aa9.17□□□□□ -0.94
TUBE1-205ENST00000603651 FOXQ1Q9C009 403 aa9.17□□□□□ -0.94
TUBE1-205ENST00000603651 MRS2Q9HD23 443 aa9.17□□□□□ -0.94
TUBE1-205ENST00000603651 VTI1BQ9UEU0 232 aa9.17□□□□□ -0.94
TUBE1-205ENST00000603651 VAV3Q9UKW4 847 aa9.17□□□□□ -0.94
TUBE1-205ENST00000603651 SNCAIPQ9Y6H5 919 aa9.17□□□□□ -0.94
TUBE1-205ENST00000603651 LRIG2O94898 1065 aa9.16□□□□□ -0.94
TUBE1-205ENST00000603651 TFE3P19532 575 aaPredicted RBP9.16□□□□□ -0.94
TUBE1-205ENST00000603651 RPS26P62854 115 aaKnown RBP9.16□□□□□ -0.94
TUBE1-205ENST00000603651 TAF1CQ15572 869 aaPredicted RBP9.16□□□□□ -0.94
TUBE1-205ENST00000603651 AGMOQ6ZNB7 445 aa9.16□□□□□ -0.94
TUBE1-205ENST00000603651 FAM214BQ7L5A3 538 aa9.16□□□□□ -0.94
TUBE1-205ENST00000603651 PRDM5Q9NQX1 630 aaPredicted RBP9.16□□□□□ -0.94
TUBE1-205ENST00000603651 KRTAP9-6A0A140TA67 174 aa9.15□□□□□ -0.94
TUBE1-205ENST00000603651 RBAK-RBAKDNI3L0D1 243 aa9.15□□□□□ -0.94
TUBE1-205ENST00000603651 SLITRK5O94991 958 aa9.15□□□□□ -0.94
TUBE1-205ENST00000603651 EOMESO95936 686 aa9.15□□□□□ -0.94
TUBE1-205ENST00000603651 PI4K2BQ8TCG2 481 aa9.15□□□□□ -0.94
TUBE1-205ENST00000603651 DPH2Q9BQC3 489 aaPredicted RBP9.15□□□□□ -0.94
TUBE1-205ENST00000603651 MKNK2Q9HBH9 465 aa9.15□□□□□ -0.94
TUBE1-205ENST00000603651 CTSHP09668 335 aa9.14□□□□□ -0.95
TUBE1-205ENST00000603651 IKZF1Q13422 519 aa9.14□□□□□ -0.95
TUBE1-205ENST00000603651 SLBPQ14493 270 aaKnown RBP eCLIP9.14□□□□□ -0.95
TUBE1-205ENST00000603651 PRAMEF13Q5VWM6 474 aa9.14□□□□□ -0.95
TUBE1-205ENST00000603651 CBLL1Q75N03 491 aa9.14□□□□□ -0.95
TUBE1-205ENST00000603651 HID1Q8IV36 788 aa9.14□□□□□ -0.95
TUBE1-205ENST00000603651 RC3H2Q9HBD1 1191 aaKnown RBP9.14□□□□□ -0.95
TUBE1-205ENST00000603651 PRDM7Q9NQW5 492 aa9.14□□□□□ -0.95
TUBE1-205ENST00000603651 FAM155AB1AL88 458 aaPredicted RBP9.13□□□□□ -0.95
TUBE1-205ENST00000603651 SORBS3O60504 671 aa9.13□□□□□ -0.95
TUBE1-205ENST00000603651 CBX7O95931 251 aa9.13□□□□□ -0.95
TUBE1-205ENST00000603651 PGRP06401 933 aa9.13□□□□□ -0.95
TUBE1-205ENST00000603651 FUT4P22083 530 aa9.13□□□□□ -0.95
TUBE1-205ENST00000603651 TXKP42681 527 aa9.13□□□□□ -0.95
TUBE1-205ENST00000603651 ANGEL2Q5VTE6 544 aaKnown RBP9.13□□□□□ -0.95
TUBE1-205ENST00000603651 CDKAL1Q5VV42 579 aa9.13□□□□□ -0.95
TUBE1-205ENST00000603651 TMC4Q7Z404 712 aa9.13□□□□□ -0.95
TUBE1-205ENST00000603651 FBXO33Q7Z6M2 555 aa9.13□□□□□ -0.95
TUBE1-205ENST00000603651 RIN3Q8TB24 985 aa9.13□□□□□ -0.95
TUBE1-205ENST00000603651 SPACA3Q8IXA5 215 aa9.12□□□□□ -0.95
TUBE1-205ENST00000603651 ADAMTS6Q9UKP5 1117 aa9.12□□□□□ -0.95
TUBE1-205ENST00000603651 CNTNAP4Q9C0A0 1308 aa9.11□□□□□ -0.95
TUBE1-205ENST00000603651 PRR33A8MZF0 331 aa9.11□□□□□ -0.95
TUBE1-205ENST00000603651 IGF2BP3O00425 579 aaKnown RBP eCLIP9.11□□□□□ -0.95
TUBE1-205ENST00000603651 NKPD1Q17RQ9 610 aa9.11□□□□□ -0.95
TUBE1-205ENST00000603651 TSNAXIP1Q2TAA8 658 aa9.11□□□□□ -0.95
TUBE1-205ENST00000603651 SFRP5Q5T4F7 317 aa9.11□□□□□ -0.95
TUBE1-205ENST00000603651 LETMD1Q6P1Q0 360 aa9.11□□□□□ -0.95
TUBE1-205ENST00000603651 CDH24Q86UP0 819 aa9.11□□□□□ -0.95
TUBE1-205ENST00000603651 MBNL3Q9NUK0 354 aaKnown RBP9.11□□□□□ -0.95
TUBE1-205ENST00000603651 GFRA2O00451 464 aa9.1□□□□□ -0.95
TUBE1-205ENST00000603651 RNASE1P07998 156 aaKnown RBP9.1□□□□□ -0.95
TUBE1-205ENST00000603651 MFSD2AQ8NA29 543 aa9.1□□□□□ -0.95
TUBE1-205ENST00000603651 PHC3Q8NDX5 983 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms