RNA–Protein interactions for RNA: ENST00000602710.5

UBE2E3-209, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-209ENST00000602710 ROBO3Q96MS0 1386 aa22.59■■□□□ 1.21
UBE2E3-209ENST00000602710 PRDM1O75626 825 aa22.59■■□□□ 1.21
UBE2E3-209ENST00000602710 SLC44A5Q8NCS7 719 aa22.59■■□□□ 1.21
UBE2E3-209ENST00000602710 TM6SF1Q9BZW5 370 aa22.59■■□□□ 1.21
UBE2E3-209ENST00000602710 RRAGCQ9HB90 399 aa22.59■■□□□ 1.21
UBE2E3-209ENST00000602710 ZSWIM6Q9HCJ5 1215 aa22.59■■□□□ 1.21
UBE2E3-209ENST00000602710 B4E1Z4 1266 aa22.58■■□□□ 1.2
UBE2E3-209ENST00000602710 HLA-DOAP06340 250 aa22.58■■□□□ 1.2
UBE2E3-209ENST00000602710 SLC3A2P08195 630 aaKnown RBP22.58■■□□□ 1.2
UBE2E3-209ENST00000602710 PSMA5P28066 241 aa22.58■■□□□ 1.2
UBE2E3-209ENST00000602710 TNNI2P48788 182 aa22.58■■□□□ 1.2
UBE2E3-209ENST00000602710 TNFAIP1Q13829 316 aa22.58■■□□□ 1.2
UBE2E3-209ENST00000602710 RABEP1Q15276 862 aa22.58■■□□□ 1.2
UBE2E3-209ENST00000602710 RRP12Q5JTH9 1297 aaKnown RBP22.58■■□□□ 1.2
UBE2E3-209ENST00000602710 TOMM22Q9NS69 142 aa22.58■■□□□ 1.2
UBE2E3-209ENST00000602710 PGAP2Q9UHJ9 254 aa22.58■■□□□ 1.2
UBE2E3-209ENST00000602710 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.58■■□□□ 1.2
UBE2E3-209ENST00000602710 COL2A1P02458 1487 aaPredicted RBP22.57■■□□□ 1.2
UBE2E3-209ENST00000602710 FGRP09769 529 aa22.57■■□□□ 1.2
UBE2E3-209ENST00000602710 GABPAQ06546 454 aa22.57■■□□□ 1.2
UBE2E3-209ENST00000602710 EAPPQ56P03 285 aaPredicted RBP22.57■■□□□ 1.2
UBE2E3-209ENST00000602710 BLOC1S2Q6QNY1 142 aa22.57■■□□□ 1.2
UBE2E3-209ENST00000602710 C16orf86Q6ZW13 317 aa22.57■■□□□ 1.2
UBE2E3-209ENST00000602710 APOBEC3FQ8IUX4 373 aaKnown RBP22.57■■□□□ 1.2
UBE2E3-209ENST00000602710 NCOA7Q8NI08 942 aa22.57■■□□□ 1.2
UBE2E3-209ENST00000602710 ZNF526Q8TF50 670 aaPredicted RBP22.57■■□□□ 1.2
UBE2E3-209ENST00000602710 CSRNP1Q96S65 589 aa22.57■■□□□ 1.2
UBE2E3-209ENST00000602710 DEFB129Q9H1M3 183 aa22.57■■□□□ 1.2
UBE2E3-209ENST00000602710 RNF41Q9H4P4 317 aaPredicted RBP22.57■■□□□ 1.2
UBE2E3-209ENST00000602710 PI4KBQ9UBF8 816 aa22.57■■□□□ 1.2
UBE2E3-209ENST00000602710 CDK8P49336 464 aa22.56■■□□□ 1.2
UBE2E3-209ENST00000602710 NEK4P51957 841 aa22.56■■□□□ 1.2
UBE2E3-209ENST00000602710 TRDNQ13061 729 aa22.56■■□□□ 1.2
UBE2E3-209ENST00000602710 RUFY3Q7L099 469 aa22.56■■□□□ 1.2
UBE2E3-209ENST00000602710 TCEANC2Q96MN5 208 aa22.56■■□□□ 1.2
UBE2E3-209ENST00000602710 SERPINB13Q9UIV8 391 aa22.56■■□□□ 1.2
UBE2E3-209ENST00000602710 FAM196BA6NMK8 535 aa22.55■■□□□ 1.2
UBE2E3-209ENST00000602710 PDE4BQ07343 736 aa22.55■■□□□ 1.2
UBE2E3-209ENST00000602710 CHST3Q7LGC8 479 aa22.55■■□□□ 1.2
UBE2E3-209ENST00000602710 RALYLQ86SE5 291 aaKnown RBP22.55■■□□□ 1.2
UBE2E3-209ENST00000602710 MB21D2Q8IYB1 491 aaPredicted RBP22.55■■□□□ 1.2
UBE2E3-209ENST00000602710 TEPSINQ96N21 525 aa22.55■■□□□ 1.2
UBE2E3-209ENST00000602710 CYP46A1Q9Y6A2 500 aa22.55■■□□□ 1.2
UBE2E3-209ENST00000602710 ORC4O43929 436 aa22.55■■□□□ 1.2
UBE2E3-209ENST00000602710 KDM4AO75164 1064 aa22.55■■□□□ 1.2
UBE2E3-209ENST00000602710 RPS6KB1P23443 525 aa22.55■■□□□ 1.2
UBE2E3-209ENST00000602710 CYB5R4Q7L1T6 521 aa22.55■■□□□ 1.2
UBE2E3-209ENST00000602710 KRT23Q9C075 422 aa22.55■■□□□ 1.2
UBE2E3-209ENST00000602710 EHD4Q9H223 541 aa22.55■■□□□ 1.2
UBE2E3-209ENST00000602710 DNAJC18Q9H819 358 aa22.55■■□□□ 1.2
UBE2E3-209ENST00000602710 CNNM2Q9H8M5 875 aa22.55■■□□□ 1.2
UBE2E3-209ENST00000602710 MKNK2Q9HBH9 465 aa22.55■■□□□ 1.2
UBE2E3-209ENST00000602710 ZSWIM5Q9P217 1185 aa22.55■■□□□ 1.2
UBE2E3-209ENST00000602710 PITPNM2Q9BZ72 1349 aa22.54■■□□□ 1.2
UBE2E3-209ENST00000602710 PCP11498 1178 aaKnown RBP22.54■■□□□ 1.2
UBE2E3-209ENST00000602710 VEGFAP15692 232 aaPredicted RBP22.54■■□□□ 1.2
UBE2E3-209ENST00000602710 PRAMEF18Q5VWM3 479 aa22.54■■□□□ 1.2
UBE2E3-209ENST00000602710 DHX32Q7L7V1 743 aaKnown RBP22.54■■□□□ 1.2
UBE2E3-209ENST00000602710 FOXP4Q8IVH2 680 aaPredicted RBP22.54■■□□□ 1.2
UBE2E3-209ENST00000602710 CRACR2BQ8N4Y2 399 aaPredicted RBP22.54■■□□□ 1.2
UBE2E3-209ENST00000602710 DCPSQ96C86 337 aaKnown RBP22.54■■□□□ 1.2
UBE2E3-209ENST00000602710 NMRK2Q9NPI5 230 aa22.54■■□□□ 1.2
UBE2E3-209ENST00000602710 RANBP6O60518 1105 aaKnown RBP22.53■■□□□ 1.2
UBE2E3-209ENST00000602710 HMGB1P09429 215 aaKnown RBP22.53■■□□□ 1.2
UBE2E3-209ENST00000602710 POTEIP0CG38 1075 aa22.53■■□□□ 1.2
UBE2E3-209ENST00000602710 POTEJP0CG39 1038 aa22.53■■□□□ 1.2
UBE2E3-209ENST00000602710 ANTXR2P58335 489 aa22.53■■□□□ 1.2
UBE2E3-209ENST00000602710 EXOSC10Q01780 885 aaKnown RBP22.53■■□□□ 1.2
UBE2E3-209ENST00000602710 DLK2Q6UY11 383 aa22.53■■□□□ 1.2
UBE2E3-209ENST00000602710 PNMA8AQ86V59 439 aaPredicted RBP22.53■■□□□ 1.2
UBE2E3-209ENST00000602710 LRRC2Q9BYS8 371 aa22.53■■□□□ 1.2
UBE2E3-209ENST00000602710 CD2BP2O95400 341 aaKnown RBP22.52■■□□□ 1.2
UBE2E3-209ENST00000602710 RASA1P20936 1047 aa22.52■■□□□ 1.2
UBE2E3-209ENST00000602710 SHMT1P34896 483 aa22.52■■□□□ 1.2
UBE2E3-209ENST00000602710 FAM47AQ5JRC9 791 aa22.52■■□□□ 1.2
UBE2E3-209ENST00000602710 METTL16Q86W50 562 aaKnown RBP22.52■■□□□ 1.2
UBE2E3-209ENST00000602710 ZC3H15Q8WU90 426 aaKnown RBP22.52■■□□□ 1.2
UBE2E3-209ENST00000602710 TTC14Q96N46 770 aa22.52■■□□□ 1.2
UBE2E3-209ENST00000602710 PDRG1Q9NUG6 133 aa22.52■■□□□ 1.2
UBE2E3-209ENST00000602710 MCM5P33992 734 aa22.51■■□□□ 1.19
UBE2E3-209ENST00000602710 NBPF12Q5TAG4 269 aaPredicted RBP22.51■■□□□ 1.19
UBE2E3-209ENST00000602710 MIGA2Q7L4E1 593 aa22.51■■□□□ 1.19
UBE2E3-209ENST00000602710 ESR2Q92731 530 aa22.51■■□□□ 1.19
UBE2E3-209ENST00000602710 SWAP70Q9UH65 585 aa22.51■■□□□ 1.19
UBE2E3-209ENST00000602710 MYH8P13535 1937 aa22.51■■□□□ 1.19
UBE2E3-209ENST00000602710 ADM5C9JUS6 153 aa22.5■■□□□ 1.19
UBE2E3-209ENST00000602710 PRC1O43663 620 aa22.5■■□□□ 1.19
UBE2E3-209ENST00000602710 ZNF444Q8N0Y2 327 aaPredicted RBP22.5■■□□□ 1.19
UBE2E3-209ENST00000602710 TRIM34Q9BYJ4 488 aa22.5■■□□□ 1.19
UBE2E3-209ENST00000602710 ZNF287Q9HBT7 754 aa22.5■■□□□ 1.19
UBE2E3-209ENST00000602710 CLEC11AQ9Y240 323 aa22.5■■□□□ 1.19
UBE2E3-209ENST00000602710 KRT26Q7Z3Y9 468 aa22.5■■□□□ 1.19
UBE2E3-209ENST00000602710 SULF1Q8IWU6 871 aa22.5■■□□□ 1.19
UBE2E3-209ENST00000602710 ZKSCAN3Q9BRR0 538 aa22.5■■□□□ 1.19
UBE2E3-209ENST00000602710 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.5■■□□□ 1.19
UBE2E3-209ENST00000602710 GPHNQ9NQX3 736 aaPredicted RBP22.5■■□□□ 1.19
UBE2E3-209ENST00000602710 TFAP4Q01664 338 aa22.49■■□□□ 1.19
UBE2E3-209ENST00000602710 Q6ZUG5 572 aa22.49■■□□□ 1.19
UBE2E3-209ENST00000602710 LARP6Q9BRS8 491 aaKnown RBP22.49■■□□□ 1.19
UBE2E3-209ENST00000602710 HERC5Q9UII4 1024 aaKnown RBP22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms