RNA–Protein interactions for RNA: ENST00000602174.5

NAPA-222, Transcript of NSF attachment protein alpha, human

TSL 2

Gene NAPA, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NAPA-222	ENST00000602174	PPP1R12B	O60237	982 aa	Predicted RBP	13.22	□□□□□ -0.29
NAPA-222	ENST00000602174	ALDH1A1	P00352	501 aa		13.22	□□□□□ -0.29
NAPA-222	ENST00000602174	PPP4C	P60510	307 aa		13.22	□□□□□ -0.29
NAPA-222	ENST00000602174	SPDYE2	Q495Y8	402 aa		13.22	□□□□□ -0.29
NAPA-222	ENST00000602174	TEKT1	Q969V4	418 aa		13.22	□□□□□ -0.29
NAPA-222	ENST00000602174	ZDHHC15	Q96MV8	337 aa		13.22	□□□□□ -0.29
NAPA-222	ENST00000602174	TEPSIN	Q96N21	525 aa		13.22	□□□□□ -0.29
NAPA-222	ENST00000602174	ZNF70	Q9UC06	446 aa	Predicted RBP	13.22	□□□□□ -0.29
NAPA-222	ENST00000602174	TRIM17	Q9Y577	477 aa		13.22	□□□□□ -0.29
NAPA-222	ENST00000602174	LAMA4	Q16363	1823 aa		13.22	□□□□□ -0.29
NAPA-222	ENST00000602174	RPAP1	Q9BWH6	1393 aa	Predicted RBP	13.21	□□□□□ -0.29
NAPA-222	ENST00000602174	NAV1	Q8NEY1	1877 aa		13.21	□□□□□ -0.29
NAPA-222	ENST00000602174	ZMYM6	O95789	1325 aa		13.21	□□□□□ -0.29
NAPA-222	ENST00000602174	ZSWIM8	A7E2V4	1837 aa		13.21	□□□□□ -0.29
NAPA-222	ENST00000602174	MAGEB6P1	A0A0J9YX57	407 aa		13.21	□□□□□ -0.29
NAPA-222	ENST00000602174	POTEF	A5A3E0	1075 aa		13.21	□□□□□ -0.29
NAPA-222	ENST00000602174	REC8	O95072	547 aa		13.21	□□□□□ -0.29
NAPA-222	ENST00000602174	MBD4	O95243	580 aa		13.21	□□□□□ -0.29
NAPA-222	ENST00000602174	CRK	P46108	304 aa		13.21	□□□□□ -0.29
NAPA-222	ENST00000602174	RBM5	P52756	815 aa	Known RBP eCLIP	13.21	□□□□□ -0.29
NAPA-222	ENST00000602174	INHBE	P58166	350 aa		13.21	□□□□□ -0.29
NAPA-222	ENST00000602174	CRHR2	Q13324	411 aa		13.21	□□□□□ -0.29
NAPA-222	ENST00000602174	SUPT20HL1	Q3ZLR7	823 aa		13.21	□□□□□ -0.29
NAPA-222	ENST00000602174	CNKSR2	Q8WXI2	1034 aa		13.21	□□□□□ -0.29
NAPA-222	ENST00000602174	LSG1	Q9H089	658 aa	Known RBP	13.21	□□□□□ -0.29
NAPA-222	ENST00000602174	TDRD3	Q9H7E2	651 aa	Known RBP	13.21	□□□□□ -0.29
NAPA-222	ENST00000602174	TESPA1	A2RU30	521 aa	Predicted RBP	13.2	□□□□□ -0.3
NAPA-222	ENST00000602174	UNCX	A6NJT0	531 aa		13.2	□□□□□ -0.3
NAPA-222	ENST00000602174	FOXP2	O15409	715 aa		13.2	□□□□□ -0.3
NAPA-222	ENST00000602174	MYO1B	O43795	1136 aa		13.2	□□□□□ -0.3
NAPA-222	ENST00000602174	GNAT2	P19087	354 aa		13.2	□□□□□ -0.3
NAPA-222	ENST00000602174	BTD	P43251	543 aa		13.2	□□□□□ -0.3
NAPA-222	ENST00000602174	CCDC129	Q6ZRS4	1044 aa		13.2	□□□□□ -0.3
NAPA-222	ENST00000602174	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	13.2	□□□□□ -0.3
NAPA-222	ENST00000602174	LCORL	Q8N3X6	602 aa		13.2	□□□□□ -0.3
NAPA-222	ENST00000602174	MIGA1	Q8NAN2	632 aa		13.2	□□□□□ -0.3
NAPA-222	ENST00000602174	CD99L2	Q8TCZ2	262 aa		13.2	□□□□□ -0.3
NAPA-222	ENST00000602174	MS4A4A	Q96JQ5	239 aa		13.2	□□□□□ -0.3
NAPA-222	ENST00000602174	STRBP	Q96SI9	672 aa	Known RBP	13.2	□□□□□ -0.3
NAPA-222	ENST00000602174	DSCC1	Q9BVC3	393 aa		13.2	□□□□□ -0.3
NAPA-222	ENST00000602174	ELP3	Q9H9T3	547 aa		13.2	□□□□□ -0.3
NAPA-222	ENST00000602174	SEC24B	O95487	1268 aa		13.19	□□□□□ -0.3
NAPA-222	ENST00000602174	BAG3	O95817	575 aa		13.19	□□□□□ -0.3
NAPA-222	ENST00000602174	PLCG2	P16885	1265 aa		13.19	□□□□□ -0.3
NAPA-222	ENST00000602174	IREB2	P48200	963 aa	Known RBP	13.19	□□□□□ -0.3
NAPA-222	ENST00000602174	RHBDL3	P58872	404 aa		13.19	□□□□□ -0.3
NAPA-222	ENST00000602174	APOBEC3H	Q6NTF7	200 aa	Known RBP	13.19	□□□□□ -0.3
NAPA-222	ENST00000602174	ANKRD13A	Q8IZ07	590 aa		13.19	□□□□□ -0.3
NAPA-222	ENST00000602174	NOL10	Q9BSC4	688 aa	Known RBP	13.19	□□□□□ -0.3
NAPA-222	ENST00000602174	TMEM39B	Q9GZU3	492 aa		13.19	□□□□□ -0.3
NAPA-222	ENST00000602174	ARMT1	Q9H993	441 aa		13.19	□□□□□ -0.3
NAPA-222	ENST00000602174	ANO2	Q9NQ90	1003 aa		13.19	□□□□□ -0.3
NAPA-222	ENST00000602174	AATF	Q9NY61	560 aa	Known RBP eCLIP	13.19	□□□□□ -0.3
NAPA-222	ENST00000602174	COL2A1	P02458	1487 aa	Predicted RBP	13.18	□□□□□ -0.3
NAPA-222	ENST00000602174	TCP10L2	B9ZVM9	353 aa		13.18	□□□□□ -0.3
NAPA-222	ENST00000602174	DYNLL1	P63167	89 aa	Known RBP	13.18	□□□□□ -0.3
NAPA-222	ENST00000602174	BRI3BP	Q8WY22	251 aa		13.18	□□□□□ -0.3
NAPA-222	ENST00000602174	OPTN	Q96CV9	577 aa		13.18	□□□□□ -0.3
NAPA-222	ENST00000602174	CRNKL1	Q9BZJ0	848 aa	Known RBP	13.18	□□□□□ -0.3
NAPA-222	ENST00000602174	PTPN22	Q9Y2R2	807 aa		13.18	□□□□□ -0.3
NAPA-222	ENST00000602174	HSPD1	P10809	573 aa	Known RBP	13.17	□□□□□ -0.3
NAPA-222	ENST00000602174	PTH1R	Q03431	593 aa		13.17	□□□□□ -0.3
NAPA-222	ENST00000602174	ALX1	Q15699	326 aa		13.17	□□□□□ -0.3
NAPA-222	ENST00000602174	VPS53	Q5VIR6	699 aa		13.17	□□□□□ -0.3
NAPA-222	ENST00000602174	GIMAP6	Q6P9H5	292 aa		13.17	□□□□□ -0.3
NAPA-222	ENST00000602174	KIAA1211	Q6ZU35	1233 aa		13.17	□□□□□ -0.3
NAPA-222	ENST00000602174	MAP4K1	Q92918	833 aa		13.17	□□□□□ -0.3
NAPA-222	ENST00000602174	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	13.17	□□□□□ -0.3
NAPA-222	ENST00000602174	PCDH10	Q9P2E7	1040 aa		13.17	□□□□□ -0.3
NAPA-222	ENST00000602174	CEP290	O15078	2479 aa		13.17	□□□□□ -0.3
NAPA-222	ENST00000602174	GSG1L2	A8MUP6	293 aa		13.16	□□□□□ -0.3
NAPA-222	ENST00000602174	NPM3	O75607	178 aa	Known RBP	13.16	□□□□□ -0.3
NAPA-222	ENST00000602174	CACNB3	P54284	484 aa		13.16	□□□□□ -0.3
NAPA-222	ENST00000602174	VGLL4	Q14135	290 aa		13.16	□□□□□ -0.3
NAPA-222	ENST00000602174	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	13.16	□□□□□ -0.3
NAPA-222	ENST00000602174	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	13.16	□□□□□ -0.3
NAPA-222	ENST00000602174	ERO1A	Q96HE7	468 aa		13.16	□□□□□ -0.3
NAPA-222	ENST00000602174	IDI2	Q9BXS1	227 aa		13.16	□□□□□ -0.3
NAPA-222	ENST00000602174	USP26	Q9BXU7	913 aa		13.16	□□□□□ -0.3
NAPA-222	ENST00000602174	ATP8A2	Q9NTI2	1148 aa		13.16	□□□□□ -0.3
NAPA-222	ENST00000602174	SLC4A4	Q9Y6R1	1079 aa		13.16	□□□□□ -0.3
NAPA-222	ENST00000602174		U3KPZ7	1027 aa	Predicted RBP	13.16	□□□□□ -0.3
NAPA-222	ENST00000602174	PATL2	C9JE40	543 aa	Known RBP	13.15	□□□□□ -0.3
NAPA-222	ENST00000602174	PRKAB2	O43741	272 aa		13.15	□□□□□ -0.3
NAPA-222	ENST00000602174	WDHD1	O75717	1129 aa	Predicted RBP	13.15	□□□□□ -0.3
NAPA-222	ENST00000602174	SP3	Q02447	781 aa		13.15	□□□□□ -0.3
NAPA-222	ENST00000602174	TNFAIP1	Q13829	316 aa		13.15	□□□□□ -0.3
NAPA-222	ENST00000602174	FKBP1C	Q5VVH2	108 aa		13.15	□□□□□ -0.3
NAPA-222	ENST00000602174	CDC42EP5	Q6NZY7	148 aa		13.15	□□□□□ -0.3
NAPA-222	ENST00000602174	TEX11	Q8IYF3	940 aa		13.15	□□□□□ -0.3
NAPA-222	ENST00000602174	FAM43A	Q8N2R8	423 aa		13.15	□□□□□ -0.3
NAPA-222	ENST00000602174	ARMC5	Q96C12	935 aa		13.15	□□□□□ -0.3
NAPA-222	ENST00000602174	IL17RA	Q96F46	866 aa		13.15	□□□□□ -0.3
NAPA-222	ENST00000602174	EFCC1	Q9HA90	598 aa		13.15	□□□□□ -0.3
NAPA-222	ENST00000602174	UPF2	Q9HAU5	1272 aa	Known RBP	13.15	□□□□□ -0.3
NAPA-222	ENST00000602174	RBM8A	Q9Y5S9	174 aa	Known RBP	13.15	□□□□□ -0.3
NAPA-222	ENST00000602174	BAZ2A	Q9UIF9	1905 aa	Known RBP	13.15	□□□□□ -0.3
NAPA-222	ENST00000602174	FLT1	P17948	1338 aa		13.14	□□□□□ -0.31
NAPA-222	ENST00000602174	MYH1	P12882	1939 aa		13.14	□□□□□ -0.31
NAPA-222	ENST00000602174	CCL15-CCL14	A0A0B4J2E2	113 aa		13.14	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms