RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 MYH2Q9UKX2 1941 aa21.9■■□□□ 1.1
SHKBP1-227ENST00000602011 CCDC84Q86UT8 332 aaPredicted RBP21.9■■□□□ 1.1
SHKBP1-227ENST00000602011 FRAT1Q92837 279 aaPredicted RBP21.9■■□□□ 1.1
SHKBP1-227ENST00000602011 HTATIP2Q9BUP3 242 aa21.9■■□□□ 1.1
SHKBP1-227ENST00000602011 UNC93B1Q9H1C4 597 aa21.9■■□□□ 1.1
SHKBP1-227ENST00000602011 PI4KBQ9UBF8 816 aa21.9■■□□□ 1.1
SHKBP1-227ENST00000602011 TRIM75PA6NK02 468 aa21.89■■□□□ 1.09
SHKBP1-227ENST00000602011 GCLCP48506 637 aaPredicted RBP21.89■■□□□ 1.09
SHKBP1-227ENST00000602011 ZKSCAN2Q63HK3 967 aa21.89■■□□□ 1.09
SHKBP1-227ENST00000602011 UBE2Q1Q7Z7E8 422 aa21.89■■□□□ 1.09
SHKBP1-227ENST00000602011 ZNF280CQ8ND82 737 aa21.89■■□□□ 1.09
SHKBP1-227ENST00000602011 COA7Q96BR5 231 aa21.89■■□□□ 1.09
SHKBP1-227ENST00000602011 ZNF512BQ96KM6 892 aaPredicted RBP21.89■■□□□ 1.09
SHKBP1-227ENST00000602011 AS3MTQ9HBK9 375 aa21.89■■□□□ 1.09
SHKBP1-227ENST00000602011 GINM1Q9NU53 330 aa21.89■■□□□ 1.09
SHKBP1-227ENST00000602011 MGAMO43451 1857 aa21.88■■□□□ 1.09
SHKBP1-227ENST00000602011 TNPO2O14787 897 aaKnown RBP21.88■■□□□ 1.09
SHKBP1-227ENST00000602011 PPP4CP60510 307 aa21.88■■□□□ 1.09
SHKBP1-227ENST00000602011 ZNF384Q8TF68 577 aa21.88■■□□□ 1.09
SHKBP1-227ENST00000602011 DOCK2Q92608 1830 aa21.87■■□□□ 1.09
SHKBP1-227ENST00000602011 PNMA6EA0A0J9YXQ4 647 aa21.87■■□□□ 1.09
SHKBP1-227ENST00000602011 USP17L5A8MUK1 530 aa21.87■■□□□ 1.09
SHKBP1-227ENST00000602011 ADCY3O60266 1144 aa21.87■■□□□ 1.09
SHKBP1-227ENST00000602011 ELNP15502 786 aa21.87■■□□□ 1.09
SHKBP1-227ENST00000602011 CAP2P40123 477 aa21.87■■□□□ 1.09
SHKBP1-227ENST00000602011 ATP8B2P98198 1209 aa21.87■■□□□ 1.09
SHKBP1-227ENST00000602011 FAM110CQ1W6H9 321 aa21.87■■□□□ 1.09
SHKBP1-227ENST00000602011 TMED8Q6PL24 325 aaPredicted RBP21.87■■□□□ 1.09
SHKBP1-227ENST00000602011 TBC1D9Q6ZT07 1266 aa21.87■■□□□ 1.09
SHKBP1-227ENST00000602011 CERS3Q8IU89 383 aa21.87■■□□□ 1.09
SHKBP1-227ENST00000602011 FOXP4Q8IVH2 680 aaPredicted RBP21.87■■□□□ 1.09
SHKBP1-227ENST00000602011 TEX11Q8IYF3 940 aa21.87■■□□□ 1.09
SHKBP1-227ENST00000602011 BCAR3O75815 825 aa21.86■■□□□ 1.09
SHKBP1-227ENST00000602011 MCAMP43121 646 aa21.86■■□□□ 1.09
SHKBP1-227ENST00000602011 FLT3LGP49771 235 aa21.86■■□□□ 1.09
SHKBP1-227ENST00000602011 SPP2Q13103 211 aa21.86■■□□□ 1.09
SHKBP1-227ENST00000602011 POLA2Q14181 598 aa21.86■■□□□ 1.09
SHKBP1-227ENST00000602011 NAA16Q6N069 864 aaPredicted RBP21.86■■□□□ 1.09
SHKBP1-227ENST00000602011 SSH3Q8TE77 659 aa21.86■■□□□ 1.09
SHKBP1-227ENST00000602011 U2AF1L4Q8WU68 220 aaKnown RBP21.86■■□□□ 1.09
SHKBP1-227ENST00000602011 SGPL1O95470 568 aa21.85■■□□□ 1.09
SHKBP1-227ENST00000602011 SH3D19Q5HYK7 790 aa21.85■■□□□ 1.09
SHKBP1-227ENST00000602011 TTC39AQ5SRH9 613 aa21.85■■□□□ 1.09
SHKBP1-227ENST00000602011 CLUAP1Q96AJ1 413 aa21.85■■□□□ 1.09
SHKBP1-227ENST00000602011 WDR18Q9BV38 432 aa21.85■■□□□ 1.09
SHKBP1-227ENST00000602011 NR2E3Q9Y5X4 410 aa21.85■■□□□ 1.09
SHKBP1-227ENST00000602011 FAM196BA6NMK8 535 aa21.84■■□□□ 1.09
SHKBP1-227ENST00000602011 FARP2O94887 1054 aaPredicted RBP21.84■■□□□ 1.09
SHKBP1-227ENST00000602011 ASNSP08243 561 aa21.84■■□□□ 1.09
SHKBP1-227ENST00000602011 OS9Q13438 667 aaPredicted RBP21.84■■□□□ 1.09
SHKBP1-227ENST00000602011 TNNI3KQ59H18 835 aa21.84■■□□□ 1.09
SHKBP1-227ENST00000602011 PI16Q6UXB8 463 aa21.84■■□□□ 1.09
SHKBP1-227ENST00000602011 TAOK2Q9UL54 1235 aa21.84■■□□□ 1.09
SHKBP1-227ENST00000602011 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.84■■□□□ 1.09
SHKBP1-227ENST00000602011 FPGT-TNNI3KV9GXZ4 949 aa21.84■■□□□ 1.09
SHKBP1-227ENST00000602011 INHAP05111 366 aa21.83■■□□□ 1.09
SHKBP1-227ENST00000602011 METTL16Q86W50 562 aaKnown RBP21.83■■□□□ 1.09
SHKBP1-227ENST00000602011 TMEM57Q8N5G2 664 aa21.83■■□□□ 1.09
SHKBP1-227ENST00000602011 ANKRD13CQ8N6S4 541 aa21.83■■□□□ 1.09
SHKBP1-227ENST00000602011 NOP58Q9Y2X3 529 aaKnown RBP21.83■■□□□ 1.09
SHKBP1-227ENST00000602011 PTPRFP10586 1907 aa21.82■■□□□ 1.08
SHKBP1-227ENST00000602011 C19orf81C9J6K1 198 aa21.82■■□□□ 1.08
SHKBP1-227ENST00000602011 SURF6O75683 361 aaKnown RBP21.82■■□□□ 1.08
SHKBP1-227ENST00000602011 PHIPQ8WWQ0 1821 aa21.82■■□□□ 1.08
SHKBP1-227ENST00000602011 ZBTB7BO15156 539 aaPredicted RBP21.81■■□□□ 1.08
SHKBP1-227ENST00000602011 TREML2Q5T2D2 321 aa21.81■■□□□ 1.08
SHKBP1-227ENST00000602011 SH3RF3Q8TEJ3 882 aaPredicted RBP21.81■■□□□ 1.08
SHKBP1-227ENST00000602011 TRIM34Q9BYJ4 488 aa21.81■■□□□ 1.08
SHKBP1-227ENST00000602011 PRO3102Q9H379 93 aa21.81■■□□□ 1.08
SHKBP1-227ENST00000602011 DOCK3Q8IZD9 2030 aa21.8■■□□□ 1.08
SHKBP1-227ENST00000602011 DOCK1Q14185 1865 aa21.8■■□□□ 1.08
SHKBP1-227ENST00000602011 HOXA7P31268 230 aaPredicted RBP21.8■■□□□ 1.08
SHKBP1-227ENST00000602011 FTSJ3Q8IY81 847 aaKnown RBP21.8■■□□□ 1.08
SHKBP1-227ENST00000602011 DEFB118Q96PH6 123 aa21.8■■□□□ 1.08
SHKBP1-227ENST00000602011 AATFQ9NY61 560 aaKnown RBP eCLIP21.8■■□□□ 1.08
SHKBP1-227ENST00000602011 TMOD4Q9NZQ9 345 aa21.8■■□□□ 1.08
SHKBP1-227ENST00000602011 TFRCP02786 760 aaKnown RBP21.79■■□□□ 1.08
SHKBP1-227ENST00000602011 HMGCS2P54868 508 aa21.79■■□□□ 1.08
SHKBP1-227ENST00000602011 BACE1P56817 501 aa21.79■■□□□ 1.08
SHKBP1-227ENST00000602011 GTF3C2Q8WUA4 911 aaPredicted RBP21.79■■□□□ 1.08
SHKBP1-227ENST00000602011 DBNDD2Q9BQY9 259 aa21.79■■□□□ 1.08
SHKBP1-227ENST00000602011 ASCC2Q9H1I8 757 aaPredicted RBP21.79■■□□□ 1.08
SHKBP1-227ENST00000602011 PAK6Q9NQU5 681 aaPredicted RBP21.79■■□□□ 1.08
SHKBP1-227ENST00000602011 CYP2E1P05181 493 aaPredicted RBP21.78■■□□□ 1.08
SHKBP1-227ENST00000602011 HLA-DOAP06340 250 aa21.78■■□□□ 1.08
SHKBP1-227ENST00000602011 CRACR2BQ8N4Y2 399 aaPredicted RBP21.78■■□□□ 1.08
SHKBP1-227ENST00000602011 TGFBRAP1Q8WUH2 860 aa21.78■■□□□ 1.08
SHKBP1-227ENST00000602011 SNRKQ9NRH2 765 aa21.78■■□□□ 1.08
SHKBP1-227ENST00000602011 MORF4L1Q9UBU8 362 aa21.78■■□□□ 1.08
SHKBP1-227ENST00000602011 IRX3P78415 501 aaPredicted RBP21.77■■□□□ 1.08
SHKBP1-227ENST00000602011 ANKLE1Q8NAG6 615 aa21.77■■□□□ 1.08
SHKBP1-227ENST00000602011 USP17L10C9JJH3 530 aa21.76■■□□□ 1.07
SHKBP1-227ENST00000602011 SOX1O00570 391 aaPredicted RBP21.76■■□□□ 1.07
SHKBP1-227ENST00000602011 RRP1BQ14684 758 aaKnown RBP21.76■■□□□ 1.07
SHKBP1-227ENST00000602011 ERC1Q8IUD2 1116 aa21.76■■□□□ 1.07
SHKBP1-227ENST00000602011 DIS3LQ8TF46 1054 aaKnown RBP21.76■■□□□ 1.07
SHKBP1-227ENST00000602011 CRISPLD2Q9H0B8 497 aa21.76■■□□□ 1.07
SHKBP1-227ENST00000602011 TNNQ9UQP3 1299 aa21.76■■□□□ 1.07
SHKBP1-227ENST00000602011 FLT1P17948 1338 aa21.76■■□□□ 1.07
SHKBP1-227ENST00000602011 EVI5O60447 810 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms