RNA–Protein interactions for RNA: ENST00000601373.5

IRF3-229, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-229ENST00000601373 PDIA3P30101 505 aaKnown RBP16.1■□□□□ 0.17
IRF3-229ENST00000601373 RSBN1LQ6PCB5 846 aaPredicted RBP16.1■□□□□ 0.17
IRF3-229ENST00000601373 KIAA0825Q8IV33 1275 aa16.1■□□□□ 0.17
IRF3-229ENST00000601373 MAPKAPK5Q8IW41 473 aa16.1■□□□□ 0.17
IRF3-229ENST00000601373 IGDCC4Q8TDY8 1250 aa16.1■□□□□ 0.17
IRF3-229ENST00000601373 JDP2Q8WYK2 163 aa16.1■□□□□ 0.17
IRF3-229ENST00000601373 USP40Q9NVE5 1235 aa16.1■□□□□ 0.17
IRF3-229ENST00000601373 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.1■□□□□ 0.17
IRF3-229ENST00000601373 TACC3Q9Y6A5 838 aa16.1■□□□□ 0.17
IRF3-229ENST00000601373 CYP2D7A0A087X1C5 515 aa16.09■□□□□ 0.17
IRF3-229ENST00000601373 KLF18A0A0U1RQI7 1052 aa16.09■□□□□ 0.17
IRF3-229ENST00000601373 GLTPD2A6NH11 291 aa16.09■□□□□ 0.17
IRF3-229ENST00000601373 USP17L8P0C7I0 530 aa16.09■□□□□ 0.17
IRF3-229ENST00000601373 LMNB1P20700 586 aa16.09■□□□□ 0.17
IRF3-229ENST00000601373 MMP14P50281 582 aa16.09■□□□□ 0.17
IRF3-229ENST00000601373 SCNN1DP51172 638 aa16.09■□□□□ 0.17
IRF3-229ENST00000601373 ST3GAL1Q11201 340 aa16.09■□□□□ 0.17
IRF3-229ENST00000601373 STK3Q13188 491 aa16.09■□□□□ 0.17
IRF3-229ENST00000601373 TMEM67Q5HYA8 995 aa16.09■□□□□ 0.17
IRF3-229ENST00000601373 APOBEC3HQ6NTF7 200 aaKnown RBP16.09■□□□□ 0.17
IRF3-229ENST00000601373 SGMS1Q86VZ5 419 aa16.09■□□□□ 0.17
IRF3-229ENST00000601373 UBAC1Q9BSL1 405 aa16.09■□□□□ 0.17
IRF3-229ENST00000601373 INCENPQ9NQS7 918 aa16.09■□□□□ 0.17
IRF3-229ENST00000601373 HDAC9Q9UKV0 1011 aa16.09■□□□□ 0.17
IRF3-229ENST00000601373 PSME4Q14997 1843 aa16.09■□□□□ 0.17
IRF3-229ENST00000601373 FER1L6Q2WGJ9 1857 aa16.09■□□□□ 0.17
IRF3-229ENST00000601373 ROBO3Q96MS0 1386 aa16.09■□□□□ 0.17
IRF3-229ENST00000601373 PDCP20941 246 aa16.08■□□□□ 0.16
IRF3-229ENST00000601373 CCDC178Q5BJE1 867 aa16.08■□□□□ 0.16
IRF3-229ENST00000601373 CDC42EP5Q6NZY7 148 aa16.08■□□□□ 0.16
IRF3-229ENST00000601373 SYNE3Q6ZMZ3 975 aa16.08■□□□□ 0.16
IRF3-229ENST00000601373 TTC6Q86TZ1 520 aa16.08■□□□□ 0.16
IRF3-229ENST00000601373 IQCA1Q86XH1 822 aa16.08■□□□□ 0.16
IRF3-229ENST00000601373 AGBL3Q8NEM8 1001 aa16.08■□□□□ 0.16
IRF3-229ENST00000601373 NAP1L2Q9ULW6 460 aaPredicted RBP16.08■□□□□ 0.16
IRF3-229ENST00000601373 FLT1P17948 1338 aa16.08■□□□□ 0.16
IRF3-229ENST00000601373 LAMB1P07942 1786 aa16.08■□□□□ 0.16
IRF3-229ENST00000601373 PCNTO95613 3336 aa16.07■□□□□ 0.16
IRF3-229ENST00000601373 CCDC69A6NI79 296 aa16.07■□□□□ 0.16
IRF3-229ENST00000601373 RANBP6O60518 1105 aaKnown RBP16.07■□□□□ 0.16
IRF3-229ENST00000601373 NPM3O75607 178 aaKnown RBP16.07■□□□□ 0.16
IRF3-229ENST00000601373 CYP2D6P10635 497 aa16.07■□□□□ 0.16
IRF3-229ENST00000601373 GJB2P29033 226 aa16.07■□□□□ 0.16
IRF3-229ENST00000601373 RBM5P52756 815 aaKnown RBP eCLIP16.07■□□□□ 0.16
IRF3-229ENST00000601373 HMGN5P82970 282 aaKnown RBP16.07■□□□□ 0.16
IRF3-229ENST00000601373 SCRN1Q12765 414 aa16.07■□□□□ 0.16
IRF3-229ENST00000601373 WTAPQ15007 396 aa16.07■□□□□ 0.16
IRF3-229ENST00000601373 NFXL1Q6ZNB6 911 aa16.07■□□□□ 0.16
IRF3-229ENST00000601373 STK11IPQ8N1F8 1099 aa16.07■□□□□ 0.16
IRF3-229ENST00000601373 GBP4Q96PP9 640 aa16.07■□□□□ 0.16
IRF3-229ENST00000601373 LY9Q9HBG7 655 aa16.07■□□□□ 0.16
IRF3-229ENST00000601373 GPHNQ9NQX3 736 aaPredicted RBP16.07■□□□□ 0.16
IRF3-229ENST00000601373 TAOK2Q9UL54 1235 aa16.07■□□□□ 0.16
IRF3-229ENST00000601373 BRPF3Q9ULD4 1205 aa16.07■□□□□ 0.16
IRF3-229ENST00000601373 KIF3AQ9Y496 699 aa16.07■□□□□ 0.16
IRF3-229ENST00000601373 WDR33Q9C0J8 1336 aaKnown RBP16.07■□□□□ 0.16
IRF3-229ENST00000601373 ZNF646O15015 1829 aaPredicted RBP16.07■□□□□ 0.16
IRF3-229ENST00000601373 NAV1Q8NEY1 1877 aa16.07■□□□□ 0.16
IRF3-229ENST00000601373 NFKBIEO00221 500 aa16.06■□□□□ 0.16
IRF3-229ENST00000601373 PSMD14O00487 310 aa16.06■□□□□ 0.16
IRF3-229ENST00000601373 CAPN15O75808 1086 aa16.06■□□□□ 0.16
IRF3-229ENST00000601373 RAD17O75943 681 aa16.06■□□□□ 0.16
IRF3-229ENST00000601373 BRD1O95696 1058 aa16.06■□□□□ 0.16
IRF3-229ENST00000601373 RCAN1P53805 252 aa16.06■□□□□ 0.16
IRF3-229ENST00000601373 TNIP1Q15025 636 aa16.06■□□□□ 0.16
IRF3-229ENST00000601373 NFKBIBQ15653 356 aa16.06■□□□□ 0.16
IRF3-229ENST00000601373 CLEC17AQ6ZS10 378 aa16.06■□□□□ 0.16
IRF3-229ENST00000601373 ZNF444Q8N0Y2 327 aaPredicted RBP16.06■□□□□ 0.16
IRF3-229ENST00000601373 OGFOD1Q8N543 542 aa16.06■□□□□ 0.16
IRF3-229ENST00000601373 TNPO1Q92973 898 aaKnown RBP16.06■□□□□ 0.16
IRF3-229ENST00000601373 ZSCAN10Q96SZ4 725 aaPredicted RBP16.06■□□□□ 0.16
IRF3-229ENST00000601373 GMLQ99445 158 aa16.06■□□□□ 0.16
IRF3-229ENST00000601373 MKNK2Q9HBH9 465 aa16.06■□□□□ 0.16
IRF3-229ENST00000601373 SBF1O95248 1867 aa16.05■□□□□ 0.16
IRF3-229ENST00000601373 CDK5RAP2Q96SN8 1893 aa16.05■□□□□ 0.16
IRF3-229ENST00000601373 GOLGA8BA8MQT2 603 aa16.05■□□□□ 0.16
IRF3-229ENST00000601373 ZBTB43O43298 467 aa16.05■□□□□ 0.16
IRF3-229ENST00000601373 WDHD1O75717 1129 aaPredicted RBP16.05■□□□□ 0.16
IRF3-229ENST00000601373 CCT2P78371 535 aaKnown RBP16.05■□□□□ 0.16
IRF3-229ENST00000601373 PPP2R5BQ15173 497 aa16.05■□□□□ 0.16
IRF3-229ENST00000601373 CFAP100Q494V2 611 aa16.05■□□□□ 0.16
IRF3-229ENST00000601373 CIAPIN1Q6FI81 312 aa16.05■□□□□ 0.16
IRF3-229ENST00000601373 CPLX2Q6PUV4 134 aaKnown RBP16.05■□□□□ 0.16
IRF3-229ENST00000601373 SMARCC2Q8TAQ2 1214 aa16.05■□□□□ 0.16
IRF3-229ENST00000601373 NKX2-3Q8TAU0 364 aa16.05■□□□□ 0.16
IRF3-229ENST00000601373 IDI2Q9BXS1 227 aa16.05■□□□□ 0.16
IRF3-229ENST00000601373 SAP30BPQ9UHR5 308 aaKnown RBP16.05■□□□□ 0.16
IRF3-229ENST00000601373 SLC12A7Q9Y666 1083 aa16.05■□□□□ 0.16
IRF3-229ENST00000601373 FOCADQ5VW36 1801 aa16.05■□□□□ 0.16
IRF3-229ENST00000601373 MYH1P12882 1939 aa16.04■□□□□ 0.16
IRF3-229ENST00000601373 PRDM1O75626 825 aa16.04■□□□□ 0.16
IRF3-229ENST00000601373 HSPA1AP0DMV8 641 aaKnown RBP16.04■□□□□ 0.16
IRF3-229ENST00000601373 HSPA1BP0DMV9 641 aaKnown RBP16.04■□□□□ 0.16
IRF3-229ENST00000601373 PLCD1P51178 756 aa16.04■□□□□ 0.16
IRF3-229ENST00000601373 CXCL9Q07325 125 aa16.04■□□□□ 0.16
IRF3-229ENST00000601373 PICALMQ13492 652 aa16.04■□□□□ 0.16
IRF3-229ENST00000601373 SEC23AQ15436 765 aa16.04■□□□□ 0.16
IRF3-229ENST00000601373 DPY19L2Q6NUT2 758 aa16.04■□□□□ 0.16
IRF3-229ENST00000601373 APOA5Q6Q788 366 aa16.04■□□□□ 0.16
IRF3-229ENST00000601373 C16orf86Q6ZW13 317 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms