RNA–Protein interactions for RNA: ENST00000601222.1

SIPA1L3-211, Transcript of signal induced proliferation associated 1 like 3, humanhuman

TSL 4

Gene SIPA1L3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L3-211ENST00000601222 GPR25O00155 361 aa11.08□□□□□ -0.64
SIPA1L3-211ENST00000601222 PTPRAP18433 802 aa11.08□□□□□ -0.64
SIPA1L3-211ENST00000601222 METTL16Q86W50 562 aaKnown RBP11.08□□□□□ -0.64
SIPA1L3-211ENST00000601222 ZNF296Q8WUU4 475 aaPredicted RBP11.08□□□□□ -0.64
SIPA1L3-211ENST00000601222 GCC1Q96CN9 775 aa11.08□□□□□ -0.64
SIPA1L3-211ENST00000601222 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.08□□□□□ -0.64
SIPA1L3-211ENST00000601222 R3HDMLQ9H3Y0 253 aa11.08□□□□□ -0.64
SIPA1L3-211ENST00000601222 ZCCHC17Q9NP64 241 aaKnown RBP11.08□□□□□ -0.64
SIPA1L3-211ENST00000601222 PALD1Q9ULE6 856 aa11.08□□□□□ -0.64
SIPA1L3-211ENST00000601222 NAV1Q8NEY1 1877 aa11.07□□□□□ -0.64
SIPA1L3-211ENST00000601222 FAM196BA6NMK8 535 aa11.07□□□□□ -0.64
SIPA1L3-211ENST00000601222 CXCL11O14625 94 aa11.07□□□□□ -0.64
SIPA1L3-211ENST00000601222 ADD2P35612 726 aa11.07□□□□□ -0.64
SIPA1L3-211ENST00000601222 USP5P45974 858 aa11.07□□□□□ -0.64
SIPA1L3-211ENST00000601222 CRHR2Q13324 411 aa11.07□□□□□ -0.64
SIPA1L3-211ENST00000601222 FOXP4Q8IVH2 680 aaPredicted RBP11.07□□□□□ -0.64
SIPA1L3-211ENST00000601222 FAM43AQ8N2R8 423 aa11.07□□□□□ -0.64
SIPA1L3-211ENST00000601222 SAP30BPQ9UHR5 308 aaKnown RBP11.07□□□□□ -0.64
SIPA1L3-211ENST00000601222 BAZ2AQ9UIF9 1905 aaKnown RBP11.07□□□□□ -0.64
SIPA1L3-211ENST00000601222 TTC41PQ6P2S7 1318 aa11.07□□□□□ -0.64
SIPA1L3-211ENST00000601222 DDX60LQ5H9U9 1706 aaKnown RBP11.06□□□□□ -0.64
SIPA1L3-211ENST00000601222 BTBD19C9JJ37 291 aa11.06□□□□□ -0.64
SIPA1L3-211ENST00000601222 ERC2O15083 957 aa11.06□□□□□ -0.64
SIPA1L3-211ENST00000601222 FKTNO75072 461 aa11.06□□□□□ -0.64
SIPA1L3-211ENST00000601222 HLA-DOAP06340 250 aa11.06□□□□□ -0.64
SIPA1L3-211ENST00000601222 CAP2P40123 477 aa11.06□□□□□ -0.64
SIPA1L3-211ENST00000601222 UBE3CQ15386 1083 aa11.06□□□□□ -0.64
SIPA1L3-211ENST00000601222 ANKRD45Q5TZF3 282 aa11.06□□□□□ -0.64
SIPA1L3-211ENST00000601222 TSHZ3Q63HK5 1081 aa11.06□□□□□ -0.64
SIPA1L3-211ENST00000601222 ZSCAN25Q6NSZ9 544 aa11.06□□□□□ -0.64
SIPA1L3-211ENST00000601222 EXOC6Q8TAG9 804 aa11.06□□□□□ -0.64
SIPA1L3-211ENST00000601222 CRNKL1Q9BZJ0 848 aaKnown RBP11.06□□□□□ -0.64
SIPA1L3-211ENST00000601222 DNAJC18Q9H819 358 aa11.06□□□□□ -0.64
SIPA1L3-211ENST00000601222 ZBTB47Q9UFB7 747 aaPredicted RBP11.06□□□□□ -0.64
SIPA1L3-211ENST00000601222 AFG3L2Q9Y4W6 797 aa11.06□□□□□ -0.64
SIPA1L3-211ENST00000601222 ZHX2Q9Y6X8 837 aa11.06□□□□□ -0.64
SIPA1L3-211ENST00000601222 GLRX3O76003 335 aaKnown RBP11.05□□□□□ -0.64
SIPA1L3-211ENST00000601222 DGKZQ13574 1117 aa11.05□□□□□ -0.64
SIPA1L3-211ENST00000601222 MOGSQ13724 837 aa11.05□□□□□ -0.64
SIPA1L3-211ENST00000601222 TAF1CQ15572 869 aaPredicted RBP11.05□□□□□ -0.64
SIPA1L3-211ENST00000601222 SLFNL1Q499Z3 407 aa11.05□□□□□ -0.64
SIPA1L3-211ENST00000601222 CTU1Q7Z7A3 348 aaKnown RBP11.05□□□□□ -0.64
SIPA1L3-211ENST00000601222 LCORLQ8N3X6 602 aa11.05□□□□□ -0.64
SIPA1L3-211ENST00000601222 CRACR2BQ8N4Y2 399 aaPredicted RBP11.05□□□□□ -0.64
SIPA1L3-211ENST00000601222 KBTBD3Q8NAB2 608 aa11.05□□□□□ -0.64
SIPA1L3-211ENST00000601222 PI4K2BQ8TCG2 481 aa11.05□□□□□ -0.64
SIPA1L3-211ENST00000601222 TRIM34Q9BYJ4 488 aa11.05□□□□□ -0.64
SIPA1L3-211ENST00000601222 TBC1D2Q9BYX2 928 aa11.05□□□□□ -0.64
SIPA1L3-211ENST00000601222 MCOLN1Q9GZU1 580 aa11.05□□□□□ -0.64
SIPA1L3-211ENST00000601222 EHD4Q9H223 541 aa11.05□□□□□ -0.64
SIPA1L3-211ENST00000601222 RWDD1Q9H446 243 aaPredicted RBP11.05□□□□□ -0.64
SIPA1L3-211ENST00000601222 ZFYVE28Q9HCC9 887 aa11.05□□□□□ -0.64
SIPA1L3-211ENST00000601222 MYH8P13535 1937 aa11.05□□□□□ -0.64
SIPA1L3-211ENST00000601222 SALL3Q9BXA9 1300 aa11.05□□□□□ -0.64
SIPA1L3-211ENST00000601222 CENPFP49454 3210 aa11.04□□□□□ -0.64
SIPA1L3-211ENST00000601222 A0A0G2JLL6 359 aaPredicted RBP11.04□□□□□ -0.64
SIPA1L3-211ENST00000601222 MX1P20591 662 aa11.04□□□□□ -0.64
SIPA1L3-211ENST00000601222 RRP1BQ14684 758 aaKnown RBP11.04□□□□□ -0.64
SIPA1L3-211ENST00000601222 FASTKD5Q7L8L6 764 aaKnown RBP11.04□□□□□ -0.64
SIPA1L3-211ENST00000601222 PRRT2Q7Z6L0 340 aaPredicted RBP11.04□□□□□ -0.64
SIPA1L3-211ENST00000601222 ANKRD23Q86SG2 305 aa11.04□□□□□ -0.64
SIPA1L3-211ENST00000601222 TTC6Q86TZ1 520 aa11.04□□□□□ -0.64
SIPA1L3-211ENST00000601222 OTUD7AQ8TE49 926 aaPredicted RBP11.04□□□□□ -0.64
SIPA1L3-211ENST00000601222 ABHD8Q96I13 439 aa11.04□□□□□ -0.64
SIPA1L3-211ENST00000601222 ATP8A2Q9NTI2 1148 aa11.04□□□□□ -0.64
SIPA1L3-211ENST00000601222 GINM1Q9NU53 330 aa11.04□□□□□ -0.64
SIPA1L3-211ENST00000601222 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.04□□□□□ -0.64
SIPA1L3-211ENST00000601222 SERPINB13Q9UIV8 391 aa11.04□□□□□ -0.64
SIPA1L3-211ENST00000601222 HTTP42858 3142 aa11.04□□□□□ -0.64
SIPA1L3-211ENST00000601222 KIAA0100Q14667 2235 aaKnown RBP11.03□□□□□ -0.64
SIPA1L3-211ENST00000601222 TRIM75PA6NK02 468 aa11.03□□□□□ -0.64
SIPA1L3-211ENST00000601222 USP17L5A8MUK1 530 aa11.03□□□□□ -0.64
SIPA1L3-211ENST00000601222 PDHXO00330 501 aa11.03□□□□□ -0.64
SIPA1L3-211ENST00000601222 TLR2O60603 784 aa11.03□□□□□ -0.64
SIPA1L3-211ENST00000601222 MBD4O95243 580 aa11.03□□□□□ -0.64
SIPA1L3-211ENST00000601222 CHGBP05060 677 aa11.03□□□□□ -0.64
SIPA1L3-211ENST00000601222 POLR3DP05423 398 aaPredicted RBP11.03□□□□□ -0.64
SIPA1L3-211ENST00000601222 ZFYP08048 801 aaPredicted RBP11.03□□□□□ -0.64
SIPA1L3-211ENST00000601222 ASNSP08243 561 aa11.03□□□□□ -0.64
SIPA1L3-211ENST00000601222 PKN2Q16513 984 aaKnown RBP11.03□□□□□ -0.64
SIPA1L3-211ENST00000601222 SLC4A8Q2Y0W8 1093 aa11.03□□□□□ -0.64
SIPA1L3-211ENST00000601222 LRRFIP1Q32MZ4 808 aaKnown RBP11.03□□□□□ -0.64
SIPA1L3-211ENST00000601222 TATDN1Q6P1N9 297 aa11.03□□□□□ -0.64
SIPA1L3-211ENST00000601222 SMC5Q8IY18 1101 aa11.03□□□□□ -0.64
SIPA1L3-211ENST00000601222 SDR42E1Q8WUS8 393 aa11.03□□□□□ -0.64
SIPA1L3-211ENST00000601222 ARMT1Q9H993 441 aa11.03□□□□□ -0.64
SIPA1L3-211ENST00000601222 DCP1AQ9NPI6 582 aaPredicted RBP11.03□□□□□ -0.64
SIPA1L3-211ENST00000601222 MCM9Q9NXL9 1143 aa11.03□□□□□ -0.64
SIPA1L3-211ENST00000601222 STAP2Q9UGK3 403 aa11.03□□□□□ -0.64
SIPA1L3-211ENST00000601222 RNF113AO15541 343 aaKnown RBP11.02□□□□□ -0.65
SIPA1L3-211ENST00000601222 IGHDP01880 384 aa11.02□□□□□ -0.65
SIPA1L3-211ENST00000601222 PLCD1P51178 756 aa11.02□□□□□ -0.65
SIPA1L3-211ENST00000601222 SP3Q02447 781 aa11.02□□□□□ -0.65
SIPA1L3-211ENST00000601222 SPP2Q13103 211 aa11.02□□□□□ -0.65
SIPA1L3-211ENST00000601222 GPAT2Q6NUI2 795 aa11.02□□□□□ -0.65
SIPA1L3-211ENST00000601222 CCDC84Q86UT8 332 aaPredicted RBP11.02□□□□□ -0.65
SIPA1L3-211ENST00000601222 ZNF280CQ8ND82 737 aa11.02□□□□□ -0.65
SIPA1L3-211ENST00000601222 APPBP2Q92624 585 aa11.02□□□□□ -0.65
SIPA1L3-211ENST00000601222 ERO1AQ96HE7 468 aa11.02□□□□□ -0.65
SIPA1L3-211ENST00000601222 WDR18Q9BV38 432 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms