RNA–Protein interactions for RNA: ENST00000600778.3

SOX2-OT-233, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 762 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-233ENST00000600778 PRRT2Q7Z6L0 340 aaPredicted RBP14.13□□□□□ -0.15
SOX2-OT-233ENST00000600778 MAPKAPK5Q8IW41 473 aa14.13□□□□□ -0.15
SOX2-OT-233ENST00000600778 SIRT2Q8IXJ6 389 aa14.13□□□□□ -0.15
SOX2-OT-233ENST00000600778 ARHGAP39Q9C0H5 1083 aa14.13□□□□□ -0.15
SOX2-OT-233ENST00000600778 CHMP4BQ9H444 224 aaKnown RBP14.13□□□□□ -0.15
SOX2-OT-233ENST00000600778 ANTXR1Q9H6X2 564 aa14.13□□□□□ -0.15
SOX2-OT-233ENST00000600778 MAST2Q6P0Q8 1798 aa14.12□□□□□ -0.15
SOX2-OT-233ENST00000600778 TRIM75PA6NK02 468 aa14.12□□□□□ -0.15
SOX2-OT-233ENST00000600778 IGSF3O75054 1194 aa14.12□□□□□ -0.15
SOX2-OT-233ENST00000600778 LACTBP83111 547 aaPredicted RBP14.12□□□□□ -0.15
SOX2-OT-233ENST00000600778 C20orf194Q5TEA3 1177 aa14.12□□□□□ -0.15
SOX2-OT-233ENST00000600778 FASTKD5Q7L8L6 764 aaKnown RBP14.12□□□□□ -0.15
SOX2-OT-233ENST00000600778 CLASRPQ8N2M8 674 aaKnown RBP14.12□□□□□ -0.15
SOX2-OT-233ENST00000600778 MAGEB6Q8N7X4 407 aa14.12□□□□□ -0.15
SOX2-OT-233ENST00000600778 KIF1BPQ96EK5 621 aa14.12□□□□□ -0.15
SOX2-OT-233ENST00000600778 PI4KBQ9UBF8 816 aa14.12□□□□□ -0.15
SOX2-OT-233ENST00000600778 COL2A1P02458 1487 aaPredicted RBP14.12□□□□□ -0.15
SOX2-OT-233ENST00000600778 CYP2C8P10632 490 aa14.11□□□□□ -0.15
SOX2-OT-233ENST00000600778 DOCK1Q14185 1865 aa14.11□□□□□ -0.15
SOX2-OT-233ENST00000600778 RRP1BQ14684 758 aaKnown RBP14.11□□□□□ -0.15
SOX2-OT-233ENST00000600778 MIGA1Q8NAN2 632 aa14.11□□□□□ -0.15
SOX2-OT-233ENST00000600778 PARK7Q99497 189 aaKnown RBP14.11□□□□□ -0.15
SOX2-OT-233ENST00000600778 DHX36Q9H2U1 1008 aaKnown RBP14.11□□□□□ -0.15
SOX2-OT-233ENST00000600778 RNF216Q9NWF9 866 aaPredicted RBP14.11□□□□□ -0.15
SOX2-OT-233ENST00000600778 HERC5Q9UII4 1024 aaKnown RBP14.11□□□□□ -0.15
SOX2-OT-233ENST00000600778 PTCH2Q9Y6C5 1203 aa14.11□□□□□ -0.15
SOX2-OT-233ENST00000600778 FLT1P17948 1338 aa14.11□□□□□ -0.15
SOX2-OT-233ENST00000600778 RAB11FIP3O75154 756 aa14.1□□□□□ -0.15
SOX2-OT-233ENST00000600778 IFIT2P09913 472 aaKnown RBP14.1□□□□□ -0.15
SOX2-OT-233ENST00000600778 CAP2P40123 477 aa14.1□□□□□ -0.15
SOX2-OT-233ENST00000600778 PSMC4P43686 418 aa14.1□□□□□ -0.15
SOX2-OT-233ENST00000600778 MAP3K12Q12852 859 aa14.1□□□□□ -0.15
SOX2-OT-233ENST00000600778 PDE3AQ14432 1141 aa14.1□□□□□ -0.15
SOX2-OT-233ENST00000600778 SAP30BPQ9UHR5 308 aaKnown RBP14.1□□□□□ -0.15
SOX2-OT-233ENST00000600778 PALD1Q9ULE6 856 aa14.1□□□□□ -0.15
SOX2-OT-233ENST00000600778 ZSWIM8A7E2V4 1837 aa14.1□□□□□ -0.15
SOX2-OT-233ENST00000600778 ADGRA2Q96PE1 1338 aa14.1□□□□□ -0.15
SOX2-OT-233ENST00000600778 PHIPQ8WWQ0 1821 aa14.09□□□□□ -0.15
SOX2-OT-233ENST00000600778 POTEFA5A3E0 1075 aa14.09□□□□□ -0.15
SOX2-OT-233ENST00000600778 FMNL1O95466 1100 aaPredicted RBP14.09□□□□□ -0.15
SOX2-OT-233ENST00000600778 CTGFP29279 349 aa14.09□□□□□ -0.15
SOX2-OT-233ENST00000600778 USP5P45974 858 aa14.09□□□□□ -0.15
SOX2-OT-233ENST00000600778 SPP2Q13103 211 aa14.09□□□□□ -0.15
SOX2-OT-233ENST00000600778 SLC4A8Q2Y0W8 1093 aa14.09□□□□□ -0.15
SOX2-OT-233ENST00000600778 SLC9C1Q4G0N8 1177 aa14.09□□□□□ -0.15
SOX2-OT-233ENST00000600778 NBPF11Q86T75 865 aa14.09□□□□□ -0.15
SOX2-OT-233ENST00000600778 FOXP4Q8IVH2 680 aaPredicted RBP14.09□□□□□ -0.15
SOX2-OT-233ENST00000600778 CRACR2BQ8N4Y2 399 aaPredicted RBP14.09□□□□□ -0.15
SOX2-OT-233ENST00000600778 ZNF280CQ8ND82 737 aa14.09□□□□□ -0.15
SOX2-OT-233ENST00000600778 ARMC5Q96C12 935 aa14.09□□□□□ -0.15
SOX2-OT-233ENST00000600778 TRIM34Q9BYJ4 488 aa14.09□□□□□ -0.15
SOX2-OT-233ENST00000600778 BRCA2P51587 3418 aa14.09□□□□□ -0.15
SOX2-OT-233ENST00000600778 USP17L5A8MUK1 530 aa14.08□□□□□ -0.16
SOX2-OT-233ENST00000600778 GNRH1P01148 92 aa14.08□□□□□ -0.16
SOX2-OT-233ENST00000600778 BCRP11274 1271 aa14.08□□□□□ -0.16
SOX2-OT-233ENST00000600778 TTF1Q15361 905 aaPredicted RBP14.08□□□□□ -0.16
SOX2-OT-233ENST00000600778 TRIM47Q96LD4 638 aa14.08□□□□□ -0.16
SOX2-OT-233ENST00000600778 DNAJC2Q99543 621 aaKnown RBP14.08□□□□□ -0.16
SOX2-OT-233ENST00000600778 TBC1D2Q9BYX2 928 aa14.08□□□□□ -0.16
SOX2-OT-233ENST00000600778 SLC45A1Q9Y2W3 748 aa14.08□□□□□ -0.16
SOX2-OT-233ENST00000600778 CDK5RAP2Q96SN8 1893 aa14.08□□□□□ -0.16
SOX2-OT-233ENST00000600778 MYCP01106 439 aaPredicted RBP14.07□□□□□ -0.16
SOX2-OT-233ENST00000600778 HLA-DOAP06340 250 aa14.07□□□□□ -0.16
SOX2-OT-233ENST00000600778 OSBPP22059 807 aa14.07□□□□□ -0.16
SOX2-OT-233ENST00000600778 HOXD10P28358 340 aa14.07□□□□□ -0.16
SOX2-OT-233ENST00000600778 TREML2Q5T2D2 321 aa14.07□□□□□ -0.16
SOX2-OT-233ENST00000600778 METTL16Q86W50 562 aaKnown RBP14.07□□□□□ -0.16
SOX2-OT-233ENST00000600778 CERS3Q8IU89 383 aa14.07□□□□□ -0.16
SOX2-OT-233ENST00000600778 SH3TC2Q8TF17 1288 aa14.07□□□□□ -0.16
SOX2-OT-233ENST00000600778 ZNF333Q96JL9 665 aa14.07□□□□□ -0.16
SOX2-OT-233ENST00000600778 TMEM106CQ9BVX2 250 aa14.07□□□□□ -0.16
SOX2-OT-233ENST00000600778 DNAJC18Q9H819 358 aa14.07□□□□□ -0.16
SOX2-OT-233ENST00000600778 AS3MTQ9HBK9 375 aa14.07□□□□□ -0.16
SOX2-OT-233ENST00000600778 AGTPBP1Q9UPW5 1226 aa14.07□□□□□ -0.16
SOX2-OT-233ENST00000600778 SIPA1L1O43166 1804 aa14.06□□□□□ -0.16
SOX2-OT-233ENST00000600778 FOCADQ5VW36 1801 aa14.06□□□□□ -0.16
SOX2-OT-233ENST00000600778 ATAD5Q96QE3 1844 aa14.06□□□□□ -0.16
SOX2-OT-233ENST00000600778 GOLIM4O00461 696 aa14.06□□□□□ -0.16
SOX2-OT-233ENST00000600778 GDF11O95390 407 aa14.06□□□□□ -0.16
SOX2-OT-233ENST00000600778 HMGCS2P54868 508 aa14.06□□□□□ -0.16
SOX2-OT-233ENST00000600778 PRMT2P55345 433 aa14.06□□□□□ -0.16
SOX2-OT-233ENST00000600778 JAG1P78504 1218 aa14.06□□□□□ -0.16
SOX2-OT-233ENST00000600778 SLC9C2Q5TAH2 1124 aa14.06□□□□□ -0.16
SOX2-OT-233ENST00000600778 TMED8Q6PL24 325 aaPredicted RBP14.06□□□□□ -0.16
SOX2-OT-233ENST00000600778 PROCA1Q8NCQ7 364 aaPredicted RBP14.06□□□□□ -0.16
SOX2-OT-233ENST00000600778 SMCR8Q8TEV9 937 aaPredicted RBP14.06□□□□□ -0.16
SOX2-OT-233ENST00000600778 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.06□□□□□ -0.16
SOX2-OT-233ENST00000600778 BOLA2Q9H3K6 86 aa14.06□□□□□ -0.16
SOX2-OT-233ENST00000600778 SRRDQ9UH36 339 aa14.06□□□□□ -0.16
SOX2-OT-233ENST00000600778 MKI67P46013 3256 aaKnown RBP14.06□□□□□ -0.16
SOX2-OT-233ENST00000600778 PTPRFP10586 1907 aa14.05□□□□□ -0.16
SOX2-OT-233ENST00000600778 MAGEB6P1A0A0J9YX57 407 aa14.05□□□□□ -0.16
SOX2-OT-233ENST00000600778 ASNSP08243 561 aa14.05□□□□□ -0.16
SOX2-OT-233ENST00000600778 EN2P19622 333 aaPredicted RBP14.05□□□□□ -0.16
SOX2-OT-233ENST00000600778 FCGRTP55899 365 aa14.05□□□□□ -0.16
SOX2-OT-233ENST00000600778 RRP1P56182 461 aaKnown RBP14.05□□□□□ -0.16
SOX2-OT-233ENST00000600778 SHROOM1Q2M3G4 852 aaPredicted RBP14.05□□□□□ -0.16
SOX2-OT-233ENST00000600778 EDC3Q96F86 508 aaKnown RBP14.05□□□□□ -0.16
SOX2-OT-233ENST00000600778 PNMA3Q9UL41 463 aa14.05□□□□□ -0.16
SOX2-OT-233ENST00000600778 MYPNQ86TC9 1320 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms