RNA–Protein interactions for RNA: ENST00000600729.1

MIA-RAB4B-201, Transcript of MIA-RAB4B readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 5 BASIC

Gene MIA-RAB4B, Length 1,229 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIA-RAB4B-201ENST00000600729 PHF20L1A8MW92 1017 aa12.6□□□□□ -0.39
MIA-RAB4B-201ENST00000600729 TFRCP02786 760 aaKnown RBP12.6□□□□□ -0.39
MIA-RAB4B-201ENST00000600729 PPATQ06203 517 aa12.6□□□□□ -0.39
MIA-RAB4B-201ENST00000600729 ALDH1L2Q3SY69 923 aa12.6□□□□□ -0.39
MIA-RAB4B-201ENST00000600729 NOL9Q5SY16 702 aaKnown RBP12.6□□□□□ -0.39
MIA-RAB4B-201ENST00000600729 WDR66Q8TBY9 1149 aa12.6□□□□□ -0.39
MIA-RAB4B-201ENST00000600729 RAET1EQ8TD07 263 aa12.6□□□□□ -0.39
MIA-RAB4B-201ENST00000600729 NECAB3Q96P71 396 aaPredicted RBP12.6□□□□□ -0.39
MIA-RAB4B-201ENST00000600729 EPHX3Q9H6B9 360 aa12.6□□□□□ -0.39
MIA-RAB4B-201ENST00000600729 ZCCHC17Q9NP64 241 aaKnown RBP12.6□□□□□ -0.39
MIA-RAB4B-201ENST00000600729 DDX4Q9NQI0 724 aaKnown RBP12.6□□□□□ -0.39
MIA-RAB4B-201ENST00000600729 SMC4Q9NTJ3 1288 aa12.6□□□□□ -0.39
MIA-RAB4B-201ENST00000600729 TMOD2Q9NZR1 351 aa12.6□□□□□ -0.39
MIA-RAB4B-201ENST00000600729 THEGQ9P2T0 379 aa12.6□□□□□ -0.39
MIA-RAB4B-201ENST00000600729 PLXNB2O15031 1838 aa12.6□□□□□ -0.39
MIA-RAB4B-201ENST00000600729 GAKO14976 1311 aa12.6□□□□□ -0.39
MIA-RAB4B-201ENST00000600729 SALL1Q9NSC2 1324 aa12.6□□□□□ -0.39
MIA-RAB4B-201ENST00000600729 DCHS1Q96JQ0 3298 aa12.59□□□□□ -0.39
MIA-RAB4B-201ENST00000600729 PDHXO00330 501 aa12.59□□□□□ -0.39
MIA-RAB4B-201ENST00000600729 CIAO1O76071 339 aa12.59□□□□□ -0.39
MIA-RAB4B-201ENST00000600729 OSBPP22059 807 aa12.59□□□□□ -0.39
MIA-RAB4B-201ENST00000600729 RASGRF1Q13972 1273 aa12.59□□□□□ -0.39
MIA-RAB4B-201ENST00000600729 DCAF15Q66K64 600 aa12.59□□□□□ -0.39
MIA-RAB4B-201ENST00000600729 ANKRD23Q86SG2 305 aa12.59□□□□□ -0.39
MIA-RAB4B-201ENST00000600729 CCDC84Q86UT8 332 aaPredicted RBP12.59□□□□□ -0.39
MIA-RAB4B-201ENST00000600729 SRRDQ9UH36 339 aa12.59□□□□□ -0.39
MIA-RAB4B-201ENST00000600729 NOB1Q9ULX3 412 aaKnown RBP12.59□□□□□ -0.39
MIA-RAB4B-201ENST00000600729 FOCADQ5VW36 1801 aa12.59□□□□□ -0.39
MIA-RAB4B-201ENST00000600729 DDTLA6NHG4 134 aaPredicted RBP12.58□□□□□ -0.4
MIA-RAB4B-201ENST00000600729 CYP2C8P10632 490 aa12.58□□□□□ -0.4
MIA-RAB4B-201ENST00000600729 BCRP11274 1271 aa12.58□□□□□ -0.4
MIA-RAB4B-201ENST00000600729 CAPN2P17655 700 aa12.58□□□□□ -0.4
MIA-RAB4B-201ENST00000600729 RGS3P49796 1198 aa12.58□□□□□ -0.4
MIA-RAB4B-201ENST00000600729 MDM2Q00987 491 aaPredicted RBP12.58□□□□□ -0.4
MIA-RAB4B-201ENST00000600729 USP40Q9NVE5 1235 aa12.58□□□□□ -0.4
MIA-RAB4B-201ENST00000600729 MAST2Q6P0Q8 1798 aa12.58□□□□□ -0.4
MIA-RAB4B-201ENST00000600729 WDHD1O75717 1129 aaPredicted RBP12.57□□□□□ -0.4
MIA-RAB4B-201ENST00000600729 LDHBP07195 334 aaKnown RBP12.57□□□□□ -0.4
MIA-RAB4B-201ENST00000600729 UBTFL1P0CB47 393 aaPredicted RBP12.57□□□□□ -0.4
MIA-RAB4B-201ENST00000600729 PSMC4P43686 418 aa12.57□□□□□ -0.4
MIA-RAB4B-201ENST00000600729 MRPS5P82675 430 aaKnown RBP12.57□□□□□ -0.4
MIA-RAB4B-201ENST00000600729 NHLH1Q02575 133 aa12.57□□□□□ -0.4
MIA-RAB4B-201ENST00000600729 CCDC102BQ68D86 513 aa12.57□□□□□ -0.4
MIA-RAB4B-201ENST00000600729 PI16Q6UXB8 463 aa12.57□□□□□ -0.4
MIA-RAB4B-201ENST00000600729 IL27Q8NEV9 243 aa12.57□□□□□ -0.4
MIA-RAB4B-201ENST00000600729 COPRSQ9NQ92 184 aa12.57□□□□□ -0.4
MIA-RAB4B-201ENST00000600729 GABRQQ9UN88 632 aa12.57□□□□□ -0.4
MIA-RAB4B-201ENST00000600729 LTBP2Q14767 1821 aa12.57□□□□□ -0.4
MIA-RAB4B-201ENST00000600729 ZBTB22O15209 634 aa12.56□□□□□ -0.4
MIA-RAB4B-201ENST00000600729 RHBDL3P58872 404 aa12.56□□□□□ -0.4
MIA-RAB4B-201ENST00000600729 TIMM10P62072 90 aa12.56□□□□□ -0.4
MIA-RAB4B-201ENST00000600729 COL26A1Q96A83 441 aa12.56□□□□□ -0.4
MIA-RAB4B-201ENST00000600729 DEFB118Q96PH6 123 aa12.56□□□□□ -0.4
MIA-RAB4B-201ENST00000600729 IDI2Q9BXS1 227 aa12.56□□□□□ -0.4
MIA-RAB4B-201ENST00000600729 CRISPLD2Q9H0B8 497 aa12.56□□□□□ -0.4
MIA-RAB4B-201ENST00000600729 C11orf16Q9NQ32 467 aa12.56□□□□□ -0.4
MIA-RAB4B-201ENST00000600729 CEP126Q9P2H0 1117 aa12.56□□□□□ -0.4
MIA-RAB4B-201ENST00000600729 FBXO3Q9UK99 471 aa12.56□□□□□ -0.4
MIA-RAB4B-201ENST00000600729 CHD6Q8TD26 2715 aa12.56□□□□□ -0.4
MIA-RAB4B-201ENST00000600729 TPRP12270 2363 aaKnown RBP12.55□□□□□ -0.4
MIA-RAB4B-201ENST00000600729 CFAP47Q6ZTR5 3102 aa12.55□□□□□ -0.4
MIA-RAB4B-201ENST00000600729 FAM196BA6NMK8 535 aa12.55□□□□□ -0.4
MIA-RAB4B-201ENST00000600729 IL15P40933 162 aaPredicted RBP12.55□□□□□ -0.4
MIA-RAB4B-201ENST00000600729 MAP3K10Q02779 954 aa12.55□□□□□ -0.4
MIA-RAB4B-201ENST00000600729 PRKCZQ05513 592 aa12.55□□□□□ -0.4
MIA-RAB4B-201ENST00000600729 RRP1BQ14684 758 aaKnown RBP12.55□□□□□ -0.4
MIA-RAB4B-201ENST00000600729 SCYL3Q8IZE3 742 aa12.55□□□□□ -0.4
MIA-RAB4B-201ENST00000600729 HOOK2Q96ED9 719 aa12.55□□□□□ -0.4
MIA-RAB4B-201ENST00000600729 DENND2AQ9ULE3 1009 aa12.55□□□□□ -0.4
MIA-RAB4B-201ENST00000600729 MYPNQ86TC9 1320 aa12.55□□□□□ -0.4
MIA-RAB4B-201ENST00000600729 CHD9Q3L8U1 2897 aa12.55□□□□□ -0.4
MIA-RAB4B-201ENST00000600729 ZNF318Q5VUA4 2279 aa12.54□□□□□ -0.4
MIA-RAB4B-201ENST00000600729 A0A0G2JLL6 359 aaPredicted RBP12.54□□□□□ -0.4
MIA-RAB4B-201ENST00000600729 A0A1B0GUL7 405 aa12.54□□□□□ -0.4
MIA-RAB4B-201ENST00000600729 SEMA3EO15041 775 aa12.54□□□□□ -0.4
MIA-RAB4B-201ENST00000600729 GPR37L1O60883 481 aa12.54□□□□□ -0.4
MIA-RAB4B-201ENST00000600729 PTPRAP18433 802 aa12.54□□□□□ -0.4
MIA-RAB4B-201ENST00000600729 RARSP54136 660 aaKnown RBP12.54□□□□□ -0.4
MIA-RAB4B-201ENST00000600729 TFCP2Q12800 502 aa12.54□□□□□ -0.4
MIA-RAB4B-201ENST00000600729 PRRT2Q7Z6L0 340 aaPredicted RBP12.54□□□□□ -0.4
MIA-RAB4B-201ENST00000600729 AFG3L2Q9Y4W6 797 aa12.54□□□□□ -0.4
MIA-RAB4B-201ENST00000600729 MROH7-TTC4A0A0A0MT08 1334 aa12.54□□□□□ -0.4
MIA-RAB4B-201ENST00000600729 ZFHX4Q86UP3 3567 aa12.53□□□□□ -0.4
MIA-RAB4B-201ENST00000600729 ANKRD11Q6UB99 2663 aaPredicted RBP12.53□□□□□ -0.4
MIA-RAB4B-201ENST00000600729 FAM86C2PA6NEL3 165 aa12.53□□□□□ -0.4
MIA-RAB4B-201ENST00000600729 ENTPD3O75355 529 aa12.53□□□□□ -0.4
MIA-RAB4B-201ENST00000600729 BTDP43251 543 aa12.53□□□□□ -0.4
MIA-RAB4B-201ENST00000600729 PICALMQ13492 652 aa12.53□□□□□ -0.4
MIA-RAB4B-201ENST00000600729 SLAIN1Q8ND83 568 aa12.53□□□□□ -0.4
MIA-RAB4B-201ENST00000600729 XAGE2Q96GT9 111 aa12.53□□□□□ -0.4
MIA-RAB4B-201ENST00000600729 ABCF2Q9UG63 623 aa12.53□□□□□ -0.4
MIA-RAB4B-201ENST00000600729 ZHX2Q9Y6X8 837 aa12.53□□□□□ -0.4
MIA-RAB4B-201ENST00000600729 PDS5AQ29RF7 1337 aaKnown RBP12.53□□□□□ -0.4
MIA-RAB4B-201ENST00000600729 CXCL11O14625 94 aa12.52□□□□□ -0.41
MIA-RAB4B-201ENST00000600729 HOXD10P28358 340 aa12.52□□□□□ -0.41
MIA-RAB4B-201ENST00000600729 MECOMQ03112 1051 aa12.52□□□□□ -0.41
MIA-RAB4B-201ENST00000600729 MTX1Q13505 466 aa12.52□□□□□ -0.41
MIA-RAB4B-201ENST00000600729 TREML2Q5T2D2 321 aa12.52□□□□□ -0.41
MIA-RAB4B-201ENST00000600729 TBC1D9Q6ZT07 1266 aa12.52□□□□□ -0.41
MIA-RAB4B-201ENST00000600729 FAM163AQ96GL9 167 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms