RNA–Protein interactions for RNA: ENST00000600077.5

HOMER3-212, Transcript of homer scaffold protein 3, humanhuman

TSL 3

Gene HOMER3, Length 675 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-212ENST00000600077 IFIT1P09914 478 aaKnown RBP17.2■□□□□ 0.34
HOMER3-212ENST00000600077 MAPK4P31152 587 aa17.2■□□□□ 0.34
HOMER3-212ENST00000600077 RGS2P41220 211 aa17.2■□□□□ 0.34
HOMER3-212ENST00000600077 RGS3P49796 1198 aa17.2■□□□□ 0.34
HOMER3-212ENST00000600077 DIXDC1Q155Q3 683 aa17.2■□□□□ 0.34
HOMER3-212ENST00000600077 ZNF280CQ8ND82 737 aa17.2■□□□□ 0.34
HOMER3-212ENST00000600077 C1QTNF1Q9BXJ1 281 aa17.2■□□□□ 0.34
HOMER3-212ENST00000600077 ATN1P54259 1190 aaPredicted RBP17.19■□□□□ 0.34
HOMER3-212ENST00000600077 RTP1P59025 263 aa17.19■□□□□ 0.34
HOMER3-212ENST00000600077 SPP2Q13103 211 aa17.19■□□□□ 0.34
HOMER3-212ENST00000600077 WWC1Q8IX03 1113 aa17.19■□□□□ 0.34
HOMER3-212ENST00000600077 CCAR1Q8IX12 1150 aaKnown RBP17.19■□□□□ 0.34
HOMER3-212ENST00000600077 GPRC5AQ8NFJ5 357 aa17.19■□□□□ 0.34
HOMER3-212ENST00000600077 SYNGAP1Q96PV0 1343 aa17.19■□□□□ 0.34
HOMER3-212ENST00000600077 DNM1LO00429 736 aa17.18■□□□□ 0.34
HOMER3-212ENST00000600077 LDHBP07195 334 aaKnown RBP17.18■□□□□ 0.34
HOMER3-212ENST00000600077 USP38Q8NB14 1042 aa17.18■□□□□ 0.34
HOMER3-212ENST00000600077 LPAR1Q92633 364 aa17.18■□□□□ 0.34
HOMER3-212ENST00000600077 TSR2Q969E8 191 aaKnown RBP17.18■□□□□ 0.34
HOMER3-212ENST00000600077 ASB2Q96Q27 587 aa17.18■□□□□ 0.34
HOMER3-212ENST00000600077 OSBPL5Q9H0X9 879 aaPredicted RBP17.18■□□□□ 0.34
HOMER3-212ENST00000600077 LTBP2Q14767 1821 aa17.18■□□□□ 0.34
HOMER3-212ENST00000600077 CACNA1FO60840 1977 aa17.18■□□□□ 0.34
HOMER3-212ENST00000600077 TBC1D12O60347 775 aa17.17■□□□□ 0.34
HOMER3-212ENST00000600077 HMGCS2P54868 508 aa17.17■□□□□ 0.34
HOMER3-212ENST00000600077 IRX3P78415 501 aaPredicted RBP17.17■□□□□ 0.34
HOMER3-212ENST00000600077 PUM3Q15397 648 aaKnown RBP17.17■□□□□ 0.34
HOMER3-212ENST00000600077 NCBP3Q53F19 620 aaKnown RBP17.17■□□□□ 0.34
HOMER3-212ENST00000600077 SH3D19Q5HYK7 790 aa17.17■□□□□ 0.34
HOMER3-212ENST00000600077 SH3BP5LQ7L8J4 393 aa17.17■□□□□ 0.34
HOMER3-212ENST00000600077 CCDC84Q86UT8 332 aaPredicted RBP17.17■□□□□ 0.34
HOMER3-212ENST00000600077 VGLL2Q8N8G2 317 aa17.17■□□□□ 0.34
HOMER3-212ENST00000600077 IL27Q8NEV9 243 aa17.17■□□□□ 0.34
HOMER3-212ENST00000600077 ADAMTS19Q8TE59 1207 aa17.17■□□□□ 0.34
HOMER3-212ENST00000600077 USP6NLQ92738 828 aa17.17■□□□□ 0.34
HOMER3-212ENST00000600077 BADQ92934 168 aa17.17■□□□□ 0.34
HOMER3-212ENST00000600077 APBA2Q99767 749 aa17.17■□□□□ 0.34
HOMER3-212ENST00000600077 ATP11BQ9Y2G3 1177 aa17.17■□□□□ 0.34
HOMER3-212ENST00000600077 IL16Q14005 1332 aa17.17■□□□□ 0.34
HOMER3-212ENST00000600077 CDH23Q9H251 3354 aa17.16■□□□□ 0.34
HOMER3-212ENST00000600077 LOC285556D6RIA3 1793 aa17.16■□□□□ 0.34
HOMER3-212ENST00000600077 PRDX5P30044 214 aa17.16■□□□□ 0.34
HOMER3-212ENST00000600077 GRIN2CQ14957 1233 aa17.16■□□□□ 0.34
HOMER3-212ENST00000600077 LRRC24Q50LG9 513 aa17.16■□□□□ 0.34
HOMER3-212ENST00000600077 MFSD14CQ5VZR4 134 aa17.16■□□□□ 0.34
HOMER3-212ENST00000600077 FAM9BQ8IZU0 186 aa17.16■□□□□ 0.34
HOMER3-212ENST00000600077 UHRF1Q96T88 793 aaPredicted RBP17.16■□□□□ 0.34
HOMER3-212ENST00000600077 AS3MTQ9HBK9 375 aa17.16■□□□□ 0.34
HOMER3-212ENST00000600077 PRDM5Q9NQX1 630 aaPredicted RBP17.16■□□□□ 0.34
HOMER3-212ENST00000600077 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.16■□□□□ 0.34
HOMER3-212ENST00000600077 THEGQ9P2T0 379 aa17.16■□□□□ 0.34
HOMER3-212ENST00000600077 DDX20Q9UHI6 824 aaKnown RBP17.16■□□□□ 0.34
HOMER3-212ENST00000600077 DDTLA6NHG4 134 aaPredicted RBP17.15■□□□□ 0.34
HOMER3-212ENST00000600077 F6X3S4 739 aa17.15■□□□□ 0.34
HOMER3-212ENST00000600077 ALDH1L1O75891 902 aa17.15■□□□□ 0.34
HOMER3-212ENST00000600077 MRPS5P82675 430 aaKnown RBP17.15■□□□□ 0.34
HOMER3-212ENST00000600077 GTF3C2Q8WUA4 911 aaPredicted RBP17.15■□□□□ 0.34
HOMER3-212ENST00000600077 HCN4Q9Y3Q4 1203 aa17.15■□□□□ 0.34
HOMER3-212ENST00000600077 USP17L5A8MUK1 530 aa17.14■□□□□ 0.33
HOMER3-212ENST00000600077 FGFR2P21802 821 aa17.14■□□□□ 0.33
HOMER3-212ENST00000600077 HOXA7P31268 230 aaPredicted RBP17.14■□□□□ 0.33
HOMER3-212ENST00000600077 CCL14Q16627 93 aa17.14■□□□□ 0.33
HOMER3-212ENST00000600077 MORN1Q5T089 497 aa17.14■□□□□ 0.33
HOMER3-212ENST00000600077 GPR142Q7Z601 462 aa17.14■□□□□ 0.33
HOMER3-212ENST00000600077 PLEKHH3Q7Z736 793 aa17.14■□□□□ 0.33
HOMER3-212ENST00000600077 ARRDC4Q8NCT1 418 aa17.14■□□□□ 0.33
HOMER3-212ENST00000600077 RNPC3Q96LT9 517 aaKnown RBP17.14■□□□□ 0.33
HOMER3-212ENST00000600077 GAS2L1Q99501 681 aaPredicted RBP17.14■□□□□ 0.33
HOMER3-212ENST00000600077 SALL2Q9Y467 1007 aaPredicted RBP17.14■□□□□ 0.33
HOMER3-212ENST00000600077 SALL1Q9NSC2 1324 aa17.14■□□□□ 0.33
HOMER3-212ENST00000600077 GLRX3O76003 335 aaKnown RBP17.13■□□□□ 0.33
HOMER3-212ENST00000600077 SLC5A1P13866 664 aa17.13■□□□□ 0.33
HOMER3-212ENST00000600077 AKNAD1Q5T1N1 836 aa17.13■□□□□ 0.33
HOMER3-212ENST00000600077 SLC39A5Q6ZMH5 540 aa17.13■□□□□ 0.33
HOMER3-212ENST00000600077 SLF2Q8IX21 1173 aa17.13■□□□□ 0.33
HOMER3-212ENST00000600077 P2RX7Q99572 595 aaKnown RBP17.13■□□□□ 0.33
HOMER3-212ENST00000600077 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.13■□□□□ 0.33
HOMER3-212ENST00000600077 CWC22Q9HCG8 908 aaKnown RBP17.13■□□□□ 0.33
HOMER3-212ENST00000600077 GNL3LQ9NVN8 582 aaKnown RBP17.13■□□□□ 0.33
HOMER3-212ENST00000600077 TMOD4Q9NZQ9 345 aa17.13■□□□□ 0.33
HOMER3-212ENST00000600077 FRMPD3Q5JV73 1810 aa17.12■□□□□ 0.33
HOMER3-212ENST00000600077 MYH13Q9UKX3 1938 aa17.12■□□□□ 0.33
HOMER3-212ENST00000600077 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.12■□□□□ 0.33
HOMER3-212ENST00000600077 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.12■□□□□ 0.33
HOMER3-212ENST00000600077 HERVK_113P62684 666 aa17.12■□□□□ 0.33
HOMER3-212ENST00000600077 MAP2K5Q13163 448 aa17.12■□□□□ 0.33
HOMER3-212ENST00000600077 LPIN2Q92539 896 aa17.12■□□□□ 0.33
HOMER3-212ENST00000600077 EDC3Q96F86 508 aaKnown RBP17.12■□□□□ 0.33
HOMER3-212ENST00000600077 SUCLG2Q96I99 432 aa17.12■□□□□ 0.33
HOMER3-212ENST00000600077 ZNF576Q9H609 170 aa17.12■□□□□ 0.33
HOMER3-212ENST00000600077 TXNRD2Q9NNW7 524 aa17.12■□□□□ 0.33
HOMER3-212ENST00000600077 NCOR1O75376 2440 aa17.12■□□□□ 0.33
HOMER3-212ENST00000600077 UTYO14607 1347 aa17.12■□□□□ 0.33
HOMER3-212ENST00000600077 FANCIQ9NVI1 1328 aa17.12■□□□□ 0.33
HOMER3-212ENST00000600077 RFX7Q2KHR2 1363 aa17.12■□□□□ 0.33
HOMER3-212ENST00000600077 DNAJB2P25686 324 aa17.11■□□□□ 0.33
HOMER3-212ENST00000600077 CNGA1P29973 690 aa17.11■□□□□ 0.33
HOMER3-212ENST00000600077 ERVK-9P63128 1117 aa17.11■□□□□ 0.33
HOMER3-212ENST00000600077 ERVK-24P63145 666 aa17.11■□□□□ 0.33
HOMER3-212ENST00000600077 PICALMQ13492 652 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms