RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 SLC4A8Q2Y0W8 1093 aa22.92■■□□□ 1.26
PNKP-213ENST00000599543 SH3TC2Q8TF17 1288 aa22.92■■□□□ 1.26
PNKP-213ENST00000599543 TRIM47Q96LD4 638 aa22.92■■□□□ 1.26
PNKP-213ENST00000599543 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.92■■□□□ 1.26
PNKP-213ENST00000599543 DBNLQ9UJU6 430 aaKnown RBP22.92■■□□□ 1.26
PNKP-213ENST00000599543 SLC45A1Q9Y2W3 748 aa22.92■■□□□ 1.26
PNKP-213ENST00000599543 SIPA1L1O43166 1804 aa22.92■■□□□ 1.26
PNKP-213ENST00000599543 SLC34A2O95436 690 aa22.91■■□□□ 1.26
PNKP-213ENST00000599543 MYCP01106 439 aaPredicted RBP22.91■■□□□ 1.26
PNKP-213ENST00000599543 CYP2E1P05181 493 aaPredicted RBP22.91■■□□□ 1.26
PNKP-213ENST00000599543 EN2P19622 333 aaPredicted RBP22.91■■□□□ 1.26
PNKP-213ENST00000599543 CTGFP29279 349 aa22.91■■□□□ 1.26
PNKP-213ENST00000599543 CEP85Q6P2H3 762 aa22.91■■□□□ 1.26
PNKP-213ENST00000599543 TLR7Q9NYK1 1049 aaKnown RBP22.91■■□□□ 1.26
PNKP-213ENST00000599543 SRRDQ9UH36 339 aa22.91■■□□□ 1.26
PNKP-213ENST00000599543 LOC285556D6RIA3 1793 aa22.91■■□□□ 1.26
PNKP-213ENST00000599543 BCRP11274 1271 aa22.9■■□□□ 1.26
PNKP-213ENST00000599543 ZAP70P43403 619 aa22.9■■□□□ 1.26
PNKP-213ENST00000599543 CCDC84Q86UT8 332 aaPredicted RBP22.9■■□□□ 1.26
PNKP-213ENST00000599543 RAET1EQ8TD07 263 aa22.9■■□□□ 1.26
PNKP-213ENST00000599543 SMCR8Q8TEV9 937 aaPredicted RBP22.9■■□□□ 1.26
PNKP-213ENST00000599543 CCDC8Q9H0W5 538 aaPredicted RBP22.9■■□□□ 1.26
PNKP-213ENST00000599543 HERC5Q9UII4 1024 aaKnown RBP22.9■■□□□ 1.26
PNKP-213ENST00000599543 MYPNQ86TC9 1320 aa22.89■■□□□ 1.26
PNKP-213ENST00000599543 IGSF3O75054 1194 aa22.89■■□□□ 1.25
PNKP-213ENST00000599543 OSBPP22059 807 aa22.89■■□□□ 1.25
PNKP-213ENST00000599543 FCGRTP55899 365 aa22.89■■□□□ 1.25
PNKP-213ENST00000599543 ERC1Q8IUD2 1116 aa22.89■■□□□ 1.25
PNKP-213ENST00000599543 EAF2Q96CJ1 260 aaPredicted RBP22.89■■□□□ 1.25
PNKP-213ENST00000599543 DHX36Q9H2U1 1008 aaKnown RBP22.89■■□□□ 1.25
PNKP-213ENST00000599543 PI4KBQ9UBF8 816 aa22.89■■□□□ 1.25
PNKP-213ENST00000599543 PPP4CP60510 307 aa22.88■■□□□ 1.25
PNKP-213ENST00000599543 C20orf194Q5TEA3 1177 aa22.88■■□□□ 1.25
PNKP-213ENST00000599543 ADGRA1Q86SQ6 560 aa22.88■■□□□ 1.25
PNKP-213ENST00000599543 TGFBRAP1Q8WUH2 860 aa22.88■■□□□ 1.25
PNKP-213ENST00000599543 TBC1D2Q9BYX2 928 aa22.88■■□□□ 1.25
PNKP-213ENST00000599543 AGTPBP1Q9UPW5 1226 aa22.88■■□□□ 1.25
PNKP-213ENST00000599543 EXOC6BQ9Y2D4 811 aa22.88■■□□□ 1.25
PNKP-213ENST00000599543 FLT1P17948 1338 aa22.87■■□□□ 1.25
PNKP-213ENST00000599543 MYH1P12882 1939 aa22.87■■□□□ 1.25
PNKP-213ENST00000599543 MS4A1P11836 297 aa22.87■■□□□ 1.25
PNKP-213ENST00000599543 CAP2P40123 477 aa22.87■■□□□ 1.25
PNKP-213ENST00000599543 MAPKAPK5Q8IW41 473 aa22.87■■□□□ 1.25
PNKP-213ENST00000599543 PIH1D3Q9NQM4 214 aaKnown RBP22.87■■□□□ 1.25
PNKP-213ENST00000599543 IDH1O75874 414 aaKnown RBP22.86■■□□□ 1.25
PNKP-213ENST00000599543 SPP2Q13103 211 aa22.86■■□□□ 1.25
PNKP-213ENST00000599543 PROCA1Q8NCQ7 364 aaPredicted RBP22.86■■□□□ 1.25
PNKP-213ENST00000599543 ZNF280CQ8ND82 737 aa22.86■■□□□ 1.25
PNKP-213ENST00000599543 TRIM34Q9BYJ4 488 aa22.86■■□□□ 1.25
PNKP-213ENST00000599543 PNMA3Q9UL41 463 aa22.86■■□□□ 1.25
PNKP-213ENST00000599543 GRK4P32298 578 aa22.85■■□□□ 1.25
PNKP-213ENST00000599543 PRKCZQ05513 592 aa22.85■■□□□ 1.25
PNKP-213ENST00000599543 AACSQ86V21 672 aa22.85■■□□□ 1.25
PNKP-213ENST00000599543 USP17L5A8MUK1 530 aa22.84■■□□□ 1.25
PNKP-213ENST00000599543 CYP7A1P22680 504 aa22.84■■□□□ 1.25
PNKP-213ENST00000599543 HSP90AB4PQ58FF6 505 aa22.84■■□□□ 1.25
PNKP-213ENST00000599543 TREML2Q5T2D2 321 aa22.84■■□□□ 1.25
PNKP-213ENST00000599543 CRACR2BQ8N4Y2 399 aaPredicted RBP22.84■■□□□ 1.25
PNKP-213ENST00000599543 AS3MTQ9HBK9 375 aa22.84■■□□□ 1.25
PNKP-213ENST00000599543 COG6Q9Y2V7 657 aa22.84■■□□□ 1.25
PNKP-213ENST00000599543 DOCK3Q8IZD9 2030 aa22.83■■□□□ 1.25
PNKP-213ENST00000599543 HMGCS2P54868 508 aa22.83■■□□□ 1.25
PNKP-213ENST00000599543 RRP1BQ14684 758 aaKnown RBP22.83■■□□□ 1.25
PNKP-213ENST00000599543 CERS3Q8IU89 383 aa22.83■■□□□ 1.25
PNKP-213ENST00000599543 PALD1Q9ULE6 856 aa22.83■■□□□ 1.25
PNKP-213ENST00000599543 CEP290O15078 2479 aa22.83■■□□□ 1.24
PNKP-213ENST00000599543 HLA-DOAP06340 250 aa22.82■■□□□ 1.24
PNKP-213ENST00000599543 PABPC4Q13310 644 aaKnown RBP eCLIP22.82■■□□□ 1.24
PNKP-213ENST00000599543 ANKRD13CQ8N6S4 541 aa22.82■■□□□ 1.24
PNKP-213ENST00000599543 MAGEB6Q8N7X4 407 aa22.82■■□□□ 1.24
PNKP-213ENST00000599543 BIN2Q9UBW5 565 aaPredicted RBP22.82■■□□□ 1.24
PNKP-213ENST00000599543 NDUFB9Q9Y6M9 179 aa22.82■■□□□ 1.24
PNKP-213ENST00000599543 TNPO2O14787 897 aaKnown RBP22.81■■□□□ 1.24
PNKP-213ENST00000599543 ASNSP08243 561 aa22.81■■□□□ 1.24
PNKP-213ENST00000599543 DYNLL1P63167 89 aaKnown RBP22.81■■□□□ 1.24
PNKP-213ENST00000599543 MAP3K12Q12852 859 aa22.81■■□□□ 1.24
PNKP-213ENST00000599543 MTFR1Q15390 333 aa22.81■■□□□ 1.24
PNKP-213ENST00000599543 FOXP4Q8IVH2 680 aaPredicted RBP22.81■■□□□ 1.24
PNKP-213ENST00000599543 MIGA1Q8NAN2 632 aa22.81■■□□□ 1.24
PNKP-213ENST00000599543 SLAIN1Q8ND83 568 aa22.81■■□□□ 1.24
PNKP-213ENST00000599543 IL1RAPL2Q9NP60 686 aa22.81■■□□□ 1.24
PNKP-213ENST00000599543 SAP30BPQ9UHR5 308 aaKnown RBP22.81■■□□□ 1.24
PNKP-213ENST00000599543 DDX19BQ9UMR2 479 aa22.81■■□□□ 1.24
PNKP-213ENST00000599543 UBXN2AP68543 259 aa22.8■■□□□ 1.24
PNKP-213ENST00000599543 FAM110CQ1W6H9 321 aa22.8■■□□□ 1.24
PNKP-213ENST00000599543 RHPN1Q8TCX5 695 aa22.8■■□□□ 1.24
PNKP-213ENST00000599543 GCC1Q96CN9 775 aa22.8■■□□□ 1.24
PNKP-213ENST00000599543 DNAJC18Q9H819 358 aa22.8■■□□□ 1.24
PNKP-213ENST00000599543 GABRQQ9UN88 632 aa22.8■■□□□ 1.24
PNKP-213ENST00000599543 HMMRO75330 724 aa22.79■■□□□ 1.24
PNKP-213ENST00000599543 MTMR2Q13614 643 aa22.79■■□□□ 1.24
PNKP-213ENST00000599543 SH3D19Q5HYK7 790 aa22.79■■□□□ 1.24
PNKP-213ENST00000599543 TMED8Q6PL24 325 aaPredicted RBP22.79■■□□□ 1.24
PNKP-213ENST00000599543 METTL16Q86W50 562 aaKnown RBP22.79■■□□□ 1.24
PNKP-213ENST00000599543 NKX2-3Q8TAU0 364 aa22.79■■□□□ 1.24
PNKP-213ENST00000599543 ANTXR1Q9H6X2 564 aa22.79■■□□□ 1.24
PNKP-213ENST00000599543 APBB1O00213 710 aa22.78■■□□□ 1.24
PNKP-213ENST00000599543 GDF11O95390 407 aa22.78■■□□□ 1.24
PNKP-213ENST00000599543 USP5P45974 858 aa22.78■■□□□ 1.24
PNKP-213ENST00000599543 GCLCP48506 637 aaPredicted RBP22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms