RNA–Protein interactions for RNA: ENST00000598772.1

HERC3-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 326 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-213ENST00000598772 PRRC2BQ5JSZ5 2229 aaKnown RBP5.76□□□□□ -1.49
HERC3-213ENST00000598772 SETXQ7Z333 2677 aaKnown RBP5.76□□□□□ -1.49
HERC3-213ENST00000598772 KBTBD13C9JR72 458 aa5.76□□□□□ -1.49
HERC3-213ENST00000598772 PQBP1O60828 265 aaKnown RBP5.76□□□□□ -1.49
HERC3-213ENST00000598772 ACRP10323 421 aa5.76□□□□□ -1.49
HERC3-213ENST00000598772 ADCYAP1R1P41586 468 aa5.76□□□□□ -1.49
HERC3-213ENST00000598772 RABGGTBP53611 331 aa5.76□□□□□ -1.49
HERC3-213ENST00000598772 EIF4A1P60842 406 aaKnown RBP5.76□□□□□ -1.49
HERC3-213ENST00000598772 ACAP1Q15027 740 aa5.76□□□□□ -1.49
HERC3-213ENST00000598772 RAB30Q15771 203 aa5.76□□□□□ -1.49
HERC3-213ENST00000598772 CCL14Q16627 93 aa5.76□□□□□ -1.49
HERC3-213ENST00000598772 MAP3K21Q5TCX8 1036 aa5.76□□□□□ -1.49
HERC3-213ENST00000598772 PPP2R2DQ66LE6 453 aa5.76□□□□□ -1.49
HERC3-213ENST00000598772 DZIP1LQ8IYY4 767 aaKnown RBP5.76□□□□□ -1.49
HERC3-213ENST00000598772 HOOK2Q96ED9 719 aa5.76□□□□□ -1.49
HERC3-213ENST00000598772 NUDT12Q9BQG2 462 aa5.76□□□□□ -1.49
HERC3-213ENST00000598772 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.76□□□□□ -1.49
HERC3-213ENST00000598772 CD209Q9NNX6 404 aa5.76□□□□□ -1.49
HERC3-213ENST00000598772 TTF2Q9UNY4 1162 aaKnown RBP5.76□□□□□ -1.49
HERC3-213ENST00000598772 TRIM35Q9UPQ4 493 aa5.76□□□□□ -1.49
HERC3-213ENST00000598772 CFAP47Q6ZTR5 3102 aa5.76□□□□□ -1.49
HERC3-213ENST00000598772 UNC79Q9P2D8 2635 aa5.76□□□□□ -1.49
HERC3-213ENST00000598772 SIPA1L3O60292 1781 aaPredicted RBP5.75□□□□□ -1.49
HERC3-213ENST00000598772 NCOR2Q9Y618 2525 aa5.75□□□□□ -1.49
HERC3-213ENST00000598772 KMT2BQ9UMN6 2715 aaPredicted RBP5.75□□□□□ -1.49
HERC3-213ENST00000598772 CXCL11O14625 94 aa5.75□□□□□ -1.49
HERC3-213ENST00000598772 CLTBP09497 229 aa5.75□□□□□ -1.49
HERC3-213ENST00000598772 MYOGP15173 224 aa5.75□□□□□ -1.49
HERC3-213ENST00000598772 DGLUCYQ7Z3D6 616 aa5.75□□□□□ -1.49
HERC3-213ENST00000598772 ARRDC4Q8NCT1 418 aa5.75□□□□□ -1.49
HERC3-213ENST00000598772 PICK1Q9NRD5 415 aa5.75□□□□□ -1.49
HERC3-213ENST00000598772 TMOD2Q9NZR1 351 aa5.75□□□□□ -1.49
HERC3-213ENST00000598772 MTCH2Q9Y6C9 303 aa5.75□□□□□ -1.49
HERC3-213ENST00000598772 PSME4Q14997 1843 aa5.75□□□□□ -1.49
HERC3-213ENST00000598772 ACACBO00763 2458 aa5.74□□□□□ -1.49
HERC3-213ENST00000598772 FASNP49327 2511 aaKnown RBP5.74□□□□□ -1.49
HERC3-213ENST00000598772 TRIM75PA6NK02 468 aa5.74□□□□□ -1.49
HERC3-213ENST00000598772 SNAP23O00161 211 aa5.74□□□□□ -1.49
HERC3-213ENST00000598772 DNM1LO00429 736 aa5.74□□□□□ -1.49
HERC3-213ENST00000598772 ZBTB22O15209 634 aa5.74□□□□□ -1.49
HERC3-213ENST00000598772 PEX10O60683 326 aa5.74□□□□□ -1.49
HERC3-213ENST00000598772 HSP90B1P14625 803 aaKnown RBP5.74□□□□□ -1.49
HERC3-213ENST00000598772 PDIA6Q15084 440 aa5.74□□□□□ -1.49
HERC3-213ENST00000598772 ST3GAL2Q16842 350 aa5.74□□□□□ -1.49
HERC3-213ENST00000598772 MFSD14CQ5VZR4 134 aa5.74□□□□□ -1.49
HERC3-213ENST00000598772 CCDC174Q6PII3 467 aa5.74□□□□□ -1.49
HERC3-213ENST00000598772 ZNF365Q70YC5 407 aa5.74□□□□□ -1.49
HERC3-213ENST00000598772 ASCL5Q7RTU5 278 aa5.74□□□□□ -1.49
HERC3-213ENST00000598772 FAM178BQ8IXR5 827 aa5.74□□□□□ -1.49
HERC3-213ENST00000598772 TRMT44Q8IYL2 757 aaKnown RBP5.74□□□□□ -1.49
HERC3-213ENST00000598772 SLC44A5Q8NCS7 719 aa5.74□□□□□ -1.49
HERC3-213ENST00000598772 PNISRQ8TF01 805 aaKnown RBP5.74□□□□□ -1.49
HERC3-213ENST00000598772 LPAR1Q92633 364 aa5.74□□□□□ -1.49
HERC3-213ENST00000598772 PBXIP1Q96AQ6 731 aa5.74□□□□□ -1.49
HERC3-213ENST00000598772 CHAMP1Q96JM3 812 aa5.74□□□□□ -1.49
HERC3-213ENST00000598772 CDC5LQ99459 802 aaKnown RBP5.74□□□□□ -1.49
HERC3-213ENST00000598772 PLA2G2EQ9NZK7 142 aa5.74□□□□□ -1.49
HERC3-213ENST00000598772 DDX20Q9UHI6 824 aaKnown RBP5.74□□□□□ -1.49
HERC3-213ENST00000598772 YBX2Q9Y2T7 364 aaKnown RBP5.74□□□□□ -1.49
HERC3-213ENST00000598772 LEMD3Q9Y2U8 911 aa5.74□□□□□ -1.49
HERC3-213ENST00000598772 KNSTRNQ9Y448 316 aa5.74□□□□□ -1.49
HERC3-213ENST00000598772 LRRC37A2A6NM11 1700 aa5.74□□□□□ -1.49
HERC3-213ENST00000598772 MYBBP1AQ9BQG0 1328 aaKnown RBP5.74□□□□□ -1.49
HERC3-213ENST00000598772 CHD7Q9P2D1 2997 aa5.73□□□□□ -1.49
HERC3-213ENST00000598772 FAM186AA6NE01 2351 aa5.73□□□□□ -1.49
HERC3-213ENST00000598772 H0Y858 1186 aa5.73□□□□□ -1.49
HERC3-213ENST00000598772 PDE8AO60658 829 aa5.73□□□□□ -1.49
HERC3-213ENST00000598772 CRKP46108 304 aa5.73□□□□□ -1.49
HERC3-213ENST00000598772 ATP2B2Q01814 1243 aa5.73□□□□□ -1.49
HERC3-213ENST00000598772 TCP10Q12799 353 aa5.73□□□□□ -1.49
HERC3-213ENST00000598772 TCF15Q12870 199 aa5.73□□□□□ -1.49
HERC3-213ENST00000598772 FAM110CQ1W6H9 321 aa5.73□□□□□ -1.49
HERC3-213ENST00000598772 EPHA10Q5JZY3 1008 aa5.73□□□□□ -1.49
HERC3-213ENST00000598772 TMEM240Q5SV17 173 aa5.73□□□□□ -1.49
HERC3-213ENST00000598772 TREML2Q5T2D2 321 aa5.73□□□□□ -1.49
HERC3-213ENST00000598772 WDR78Q5VTH9 848 aa5.73□□□□□ -1.49
HERC3-213ENST00000598772 EP400NLQ6ZTU2 488 aa5.73□□□□□ -1.49
HERC3-213ENST00000598772 SUGP1Q8IWZ8 645 aaKnown RBP5.73□□□□□ -1.49
HERC3-213ENST00000598772 ARNTL2Q8WYA1 636 aa5.73□□□□□ -1.49
HERC3-213ENST00000598772 TLR9Q9NR96 1032 aa5.73□□□□□ -1.49
HERC3-213ENST00000598772 PNMA3Q9UL41 463 aa5.73□□□□□ -1.49
HERC3-213ENST00000598772 NDUFB9Q9Y6M9 179 aa5.73□□□□□ -1.49
HERC3-213ENST00000598772 LTBP2Q14767 1821 aa5.73□□□□□ -1.49
HERC3-213ENST00000598772 ZNF318Q5VUA4 2279 aa5.73□□□□□ -1.49
HERC3-213ENST00000598772 COL3A1P02461 1466 aaPredicted RBP5.72□□□□□ -1.49
HERC3-213ENST00000598772 TRIOO75962 3097 aa5.72□□□□□ -1.49
HERC3-213ENST00000598772 A0A0G2JLL6 359 aaPredicted RBP5.72□□□□□ -1.49
HERC3-213ENST00000598772 PLIN1O60240 522 aa5.72□□□□□ -1.49
HERC3-213ENST00000598772 IL9P15248 144 aa5.72□□□□□ -1.49
HERC3-213ENST00000598772 KCNA5P22460 613 aa5.72□□□□□ -1.49
HERC3-213ENST00000598772 IGHMBP2P38935 993 aaKnown RBP5.72□□□□□ -1.49
HERC3-213ENST00000598772 RGS2P41220 211 aa5.72□□□□□ -1.49
HERC3-213ENST00000598772 GCLCP48506 637 aaPredicted RBP5.72□□□□□ -1.49
HERC3-213ENST00000598772 PPIGQ13427 754 aaKnown RBP eCLIP5.72□□□□□ -1.49
HERC3-213ENST00000598772 MFSD14BQ5SR56 506 aa5.72□□□□□ -1.49
HERC3-213ENST00000598772 PTCRAQ6ISU1 281 aaPredicted RBP5.72□□□□□ -1.49
HERC3-213ENST00000598772 ZNF804AQ7Z570 1209 aa5.72□□□□□ -1.49
HERC3-213ENST00000598772 PRRT2Q7Z6L0 340 aaPredicted RBP5.72□□□□□ -1.49
HERC3-213ENST00000598772 CCDC84Q86UT8 332 aaPredicted RBP5.72□□□□□ -1.49
HERC3-213ENST00000598772 PRRX2Q99811 253 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms