RNA–Protein interactions for RNA: ENST00000598580.1

GRAMD1A-209, Transcript of GRAM domain containing 1A, human

TSL 3

Gene GRAMD1A, Length 400 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GRAMD1A-209	ENST00000598580	PHIP	Q8WWQ0	1821 aa		13.61	□□□□□ -0.23
GRAMD1A-209	ENST00000598580	SZT2	Q5T011	3432 aa		13.6	□□□□□ -0.23
GRAMD1A-209	ENST00000598580	IPO8	O15397	1037 aa	Known RBP	13.6	□□□□□ -0.23
GRAMD1A-209	ENST00000598580	ADCY3	O60266	1144 aa		13.6	□□□□□ -0.23
GRAMD1A-209	ENST00000598580	CYP2E1	P05181	493 aa	Predicted RBP	13.6	□□□□□ -0.23
GRAMD1A-209	ENST00000598580	ATP8B2	P98198	1209 aa		13.6	□□□□□ -0.23
GRAMD1A-209	ENST00000598580	G3BP1	Q13283	466 aa	Known RBP eCLIP	13.6	□□□□□ -0.23
GRAMD1A-209	ENST00000598580	SSH3	Q8TE77	659 aa		13.6	□□□□□ -0.23
GRAMD1A-209	ENST00000598580	DNAJC18	Q9H819	358 aa		13.6	□□□□□ -0.23
GRAMD1A-209	ENST00000598580	TLR7	Q9NYK1	1049 aa	Known RBP	13.6	□□□□□ -0.23
GRAMD1A-209	ENST00000598580	LDHC	P07864	332 aa		13.59	□□□□□ -0.23
GRAMD1A-209	ENST00000598580	CAP2	P40123	477 aa		13.59	□□□□□ -0.23
GRAMD1A-209	ENST00000598580	HMGCS2	P54868	508 aa		13.59	□□□□□ -0.23
GRAMD1A-209	ENST00000598580	TNNI3K	Q59H18	835 aa		13.59	□□□□□ -0.23
GRAMD1A-209	ENST00000598580	GORAB	Q5T7V8	394 aa		13.59	□□□□□ -0.23
GRAMD1A-209	ENST00000598580	POTEE	Q6S8J3	1075 aa		13.59	□□□□□ -0.23
GRAMD1A-209	ENST00000598580	TEX11	Q8IYF3	940 aa		13.59	□□□□□ -0.23
GRAMD1A-209	ENST00000598580	U2AF1L4	Q8WU68	220 aa	Known RBP	13.59	□□□□□ -0.23
GRAMD1A-209	ENST00000598580	PIH1D3	Q9NQM4	214 aa	Known RBP	13.59	□□□□□ -0.23
GRAMD1A-209	ENST00000598580	BIN2	Q9UBW5	565 aa	Predicted RBP	13.59	□□□□□ -0.23
GRAMD1A-209	ENST00000598580	FPGT-TNNI3K	V9GXZ4	949 aa		13.59	□□□□□ -0.23
GRAMD1A-209	ENST00000598580	DOCK2	Q92608	1830 aa		13.59	□□□□□ -0.23
GRAMD1A-209	ENST00000598580	DOCK3	Q8IZD9	2030 aa		13.58	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	INHA	P05111	366 aa		13.58	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	PPP4C	P60510	307 aa		13.58	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	GSTO1	P78417	241 aa		13.58	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	IRF5	Q13568	498 aa		13.58	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	MAPKAPK5	Q8IW41	473 aa		13.58	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	ZNF280C	Q8ND82	737 aa		13.58	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	SLAIN1	Q8ND83	568 aa		13.58	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	PRO3102	Q9H379	93 aa		13.58	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	GPR108	Q9NPR9	543 aa		13.58	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	AATF	Q9NY61	560 aa	Known RBP eCLIP	13.58	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	LRP2BP	Q9P2M1	347 aa		13.58	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	GJD2	Q9UKL4	321 aa		13.58	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	PTPRF	P10586	1907 aa		13.58	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	COL2A1	P02458	1487 aa	Predicted RBP	13.57	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	TNPO2	O14787	897 aa	Known RBP	13.57	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	ZBTB7B	O15156	539 aa	Predicted RBP	13.57	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	SGPL1	O95470	568 aa		13.57	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	MAP4K4	O95819	1239 aa	Predicted RBP	13.57	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	UQCRFS1P1	P0C7P4	283 aa		13.57	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	ZAP70	P43403	619 aa		13.57	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	DYNLL1	P63167	89 aa	Known RBP	13.57	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	TRIM32	Q13049	653 aa		13.57	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	SH3D19	Q5HYK7	790 aa		13.57	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	ZKSCAN2	Q63HK3	967 aa		13.57	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	CHRDL2	Q6WN34	429 aa		13.57	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	METTL16	Q86W50	562 aa	Known RBP	13.57	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	TGFBRAP1	Q8WUH2	860 aa		13.57	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	DPF3	Q92784	378 aa		13.57	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	EAF2	Q96CJ1	260 aa	Predicted RBP	13.57	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	ASCC2	Q9H1I8	757 aa	Predicted RBP	13.57	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	RBM27	Q9P2N5	1060 aa	Known RBP	13.57	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	DBNL	Q9UJU6	430 aa	Known RBP	13.57	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	PALD1	Q9ULE6	856 aa		13.57	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	NOP58	Q9Y2X3	529 aa	Known RBP	13.57	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	NDUFB9	Q9Y6M9	179 aa		13.57	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	USP17L5	A8MUK1	530 aa		13.56	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	SURF6	O75683	361 aa	Known RBP	13.56	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	NAA16	Q6N069	864 aa	Predicted RBP	13.56	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	PROCA1	Q8NCQ7	364 aa	Predicted RBP	13.56	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	NKX2-3	Q8TAU0	364 aa		13.56	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	PXYLP1	Q8TE99	480 aa		13.56	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	SMCR8	Q8TEV9	937 aa	Predicted RBP	13.56	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	DEFB118	Q96PH6	123 aa		13.56	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	P2RX7	Q99572	595 aa	Known RBP	13.56	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	CCDC8	Q9H0W5	538 aa	Predicted RBP	13.56	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	TXNRD2	Q9NNW7	524 aa		13.56	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	PAK6	Q9NQU5	681 aa	Predicted RBP	13.56	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	PI4KB	Q9UBF8	816 aa		13.56	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	DOCK1	Q14185	1865 aa		13.56	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	SIPA1L1	O43166	1804 aa		13.55	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	MNX1	P50219	401 aa	Predicted RBP	13.55	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	UBXN2A	P68543	259 aa		13.55	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	FAM110C	Q1W6H9	321 aa		13.55	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	TTC39A	Q5SRH9	613 aa		13.55	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	ZNF512B	Q96KM6	892 aa	Predicted RBP	13.55	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	WDR18	Q9BV38	432 aa		13.55	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	CRISPLD2	Q9H0B8	497 aa		13.55	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	SAP30BP	Q9UHR5	308 aa	Known RBP	13.55	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	FLT1	P17948	1338 aa		13.55	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	MGAM	O43451	1857 aa		13.55	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	FARP2	O94887	1054 aa	Predicted RBP	13.54	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	GDF11	O95390	407 aa		13.54	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	MTMR2	Q13614	643 aa		13.54	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	DIS3L	Q8TF46	1054 aa	Known RBP	13.54	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	ANTXR1	Q9H6X2	564 aa		13.54	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	HERC5	Q9UII4	1024 aa	Known RBP	13.54	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	TFRC	P02786	760 aa	Known RBP	13.53	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	BACE1	P56817	501 aa		13.53	□□□□□ -0.24
GRAMD1A-209	ENST00000598580		Q3C1V9	767 aa		13.53	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	CCDC158	Q5M9N0	1113 aa		13.53	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	FOXP4	Q8IVH2	680 aa	Predicted RBP	13.53	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	MIER1	Q8N108	512 aa		13.53	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	EMILIN3	Q9NT22	766 aa		13.53	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	RBPJL	Q9UBG7	517 aa		13.53	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	MORF4L1	Q9UBU8	362 aa		13.53	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	TAOK2	Q9UL54	1235 aa		13.53	□□□□□ -0.24
GRAMD1A-209	ENST00000598580	CYP7A1	P22680	504 aa		13.52	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms