RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 PDE3AQ14432 1141 aa16.78■□□□□ 0.28
SCAF1-203ENST00000598359 GPAT2Q6NUI2 795 aa16.78■□□□□ 0.28
SCAF1-203ENST00000598359 ANKRD23Q86SG2 305 aa16.78■□□□□ 0.28
SCAF1-203ENST00000598359 MAGEB6Q8N7X4 407 aa16.78■□□□□ 0.28
SCAF1-203ENST00000598359 KIF1BPQ96EK5 621 aa16.78■□□□□ 0.28
SCAF1-203ENST00000598359 SAP30BPQ9UHR5 308 aaKnown RBP16.78■□□□□ 0.28
SCAF1-203ENST00000598359 CPA4Q9UI42 421 aa16.78■□□□□ 0.28
SCAF1-203ENST00000598359 AFG3L2Q9Y4W6 797 aa16.78■□□□□ 0.28
SCAF1-203ENST00000598359 KIAA0100Q14667 2235 aaKnown RBP16.77■□□□□ 0.28
SCAF1-203ENST00000598359 FLT1P17948 1338 aa16.77■□□□□ 0.28
SCAF1-203ENST00000598359 TRIM75PA6NK02 468 aa16.77■□□□□ 0.28
SCAF1-203ENST00000598359 TBC1D12O60347 775 aa16.77■□□□□ 0.28
SCAF1-203ENST00000598359 GADL1Q6ZQY3 521 aa16.77■□□□□ 0.28
SCAF1-203ENST00000598359 CLASRPQ8N2M8 674 aaKnown RBP16.77■□□□□ 0.28
SCAF1-203ENST00000598359 PTPN22Q9Y2R2 807 aa16.77■□□□□ 0.28
SCAF1-203ENST00000598359 COL2A1P02458 1487 aaPredicted RBP16.77■□□□□ 0.28
SCAF1-203ENST00000598359 DOCK1Q14185 1865 aa16.77■□□□□ 0.27
SCAF1-203ENST00000598359 SIPA1L1O43166 1804 aa16.76■□□□□ 0.27
SCAF1-203ENST00000598359 CXCL11O14625 94 aa16.76■□□□□ 0.27
SCAF1-203ENST00000598359 IFIT2P09913 472 aaKnown RBP16.76■□□□□ 0.27
SCAF1-203ENST00000598359 PLCG2P16885 1265 aa16.76■□□□□ 0.27
SCAF1-203ENST00000598359 EDC3Q96F86 508 aaKnown RBP16.76■□□□□ 0.27
SCAF1-203ENST00000598359 DNAJC2Q99543 621 aaKnown RBP16.76■□□□□ 0.27
SCAF1-203ENST00000598359 ZCCHC17Q9NP64 241 aaKnown RBP16.76■□□□□ 0.27
SCAF1-203ENST00000598359 PALD1Q9ULE6 856 aa16.76■□□□□ 0.27
SCAF1-203ENST00000598359 CDK5RAP2Q96SN8 1893 aa16.76■□□□□ 0.27
SCAF1-203ENST00000598359 A0A0G2JLL6 359 aaPredicted RBP16.75■□□□□ 0.27
SCAF1-203ENST00000598359 SMARCA5O60264 1052 aaPredicted RBP16.75■□□□□ 0.27
SCAF1-203ENST00000598359 CYP2C8P10632 490 aa16.75■□□□□ 0.27
SCAF1-203ENST00000598359 JAG1P78504 1218 aa16.75■□□□□ 0.27
SCAF1-203ENST00000598359 SHROOM1Q2M3G4 852 aaPredicted RBP16.75■□□□□ 0.27
SCAF1-203ENST00000598359 PRRT2Q7Z6L0 340 aaPredicted RBP16.75■□□□□ 0.27
SCAF1-203ENST00000598359 CHMP4BQ9H444 224 aaKnown RBP16.75■□□□□ 0.27
SCAF1-203ENST00000598359 DNAJC18Q9H819 358 aa16.75■□□□□ 0.27
SCAF1-203ENST00000598359 PHIPQ8WWQ0 1821 aa16.75■□□□□ 0.27
SCAF1-203ENST00000598359 RBBP6Q7Z6E9 1792 aaKnown RBP16.74■□□□□ 0.27
SCAF1-203ENST00000598359 ADGRA2Q96PE1 1338 aa16.74■□□□□ 0.27
SCAF1-203ENST00000598359 BRCA2P51587 3418 aa16.74■□□□□ 0.27
SCAF1-203ENST00000598359 GOLIM4O00461 696 aa16.74■□□□□ 0.27
SCAF1-203ENST00000598359 RAB11FIP3O75154 756 aa16.74■□□□□ 0.27
SCAF1-203ENST00000598359 CTGFP29279 349 aa16.74■□□□□ 0.27
SCAF1-203ENST00000598359 LACTBP83111 547 aaPredicted RBP16.74■□□□□ 0.27
SCAF1-203ENST00000598359 MAP3K12Q12852 859 aa16.74■□□□□ 0.27
SCAF1-203ENST00000598359 C17orf99Q6UX52 265 aa16.74■□□□□ 0.27
SCAF1-203ENST00000598359 PI4KBQ9UBF8 816 aa16.74■□□□□ 0.27
SCAF1-203ENST00000598359 PTCH2Q9Y6C5 1203 aa16.74■□□□□ 0.27
SCAF1-203ENST00000598359 CAP2P40123 477 aa16.73■□□□□ 0.27
SCAF1-203ENST00000598359 FXR1P51114 621 aaKnown RBP eCLIP16.73■□□□□ 0.27
SCAF1-203ENST00000598359 DHX36Q9H2U1 1008 aaKnown RBP16.73■□□□□ 0.27
SCAF1-203ENST00000598359 HERC5Q9UII4 1024 aaKnown RBP16.73■□□□□ 0.27
SCAF1-203ENST00000598359 FOCADQ5VW36 1801 aa16.73■□□□□ 0.27
SCAF1-203ENST00000598359 GDF11O95390 407 aa16.72■□□□□ 0.27
SCAF1-203ENST00000598359 PDE6AP16499 860 aa16.72■□□□□ 0.27
SCAF1-203ENST00000598359 USP5P45974 858 aa16.72■□□□□ 0.27
SCAF1-203ENST00000598359 SPP2Q13103 211 aa16.72■□□□□ 0.27
SCAF1-203ENST00000598359 SLFNL1Q499Z3 407 aa16.72■□□□□ 0.27
SCAF1-203ENST00000598359 TREML2Q5T2D2 321 aa16.72■□□□□ 0.27
SCAF1-203ENST00000598359 SLC9C2Q5TAH2 1124 aa16.72■□□□□ 0.27
SCAF1-203ENST00000598359 FASTKD5Q7L8L6 764 aaKnown RBP16.72■□□□□ 0.27
SCAF1-203ENST00000598359 CRACR2BQ8N4Y2 399 aaPredicted RBP16.72■□□□□ 0.27
SCAF1-203ENST00000598359 BOLA2Q9H3K6 86 aa16.72■□□□□ 0.27
SCAF1-203ENST00000598359 SZT2Q5T011 3432 aa16.72■□□□□ 0.27
SCAF1-203ENST00000598359 ATAD5Q96QE3 1844 aa16.71■□□□□ 0.27
SCAF1-203ENST00000598359 PTPRFP10586 1907 aa16.71■□□□□ 0.27
SCAF1-203ENST00000598359 KIF22Q14807 665 aa16.71■□□□□ 0.27
SCAF1-203ENST00000598359 TRIM47Q96LD4 638 aa16.71■□□□□ 0.27
SCAF1-203ENST00000598359 PARK7Q99497 189 aaKnown RBP16.71■□□□□ 0.27
SCAF1-203ENST00000598359 RIOK1Q9BRS2 568 aaKnown RBP16.71■□□□□ 0.27
SCAF1-203ENST00000598359 LRRCC1Q9C099 1032 aa16.71■□□□□ 0.27
SCAF1-203ENST00000598359 ZNF532Q9HCE3 1301 aa16.7■□□□□ 0.26
SCAF1-203ENST00000598359 POTEFA5A3E0 1075 aa16.7■□□□□ 0.26
SCAF1-203ENST00000598359 IGSF3O75054 1194 aa16.7■□□□□ 0.26
SCAF1-203ENST00000598359 MYCP01106 439 aaPredicted RBP16.7■□□□□ 0.26
SCAF1-203ENST00000598359 CHGBP05060 677 aa16.7■□□□□ 0.26
SCAF1-203ENST00000598359 PSMC4P43686 418 aa16.7■□□□□ 0.26
SCAF1-203ENST00000598359 HMGCS2P54868 508 aa16.7■□□□□ 0.26
SCAF1-203ENST00000598359 EVX2Q03828 476 aa16.7■□□□□ 0.26
SCAF1-203ENST00000598359 TTF1Q15361 905 aaPredicted RBP16.7■□□□□ 0.26
SCAF1-203ENST00000598359 ZNF280CQ8ND82 737 aa16.7■□□□□ 0.26
SCAF1-203ENST00000598359 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.7■□□□□ 0.26
SCAF1-203ENST00000598359 TRIM34Q9BYJ4 488 aa16.7■□□□□ 0.26
SCAF1-203ENST00000598359 MAGEB6P1A0A0J9YX57 407 aa16.69■□□□□ 0.26
SCAF1-203ENST00000598359 TCRBV5S4A2TA0A5A2 114 aa16.69■□□□□ 0.26
SCAF1-203ENST00000598359 USP17L5A8MUK1 530 aa16.69■□□□□ 0.26
SCAF1-203ENST00000598359 HLA-DOAP06340 250 aa16.69■□□□□ 0.26
SCAF1-203ENST00000598359 BCRP11274 1271 aa16.69■□□□□ 0.26
SCAF1-203ENST00000598359 ARHGEF6Q15052 776 aa16.69■□□□□ 0.26
SCAF1-203ENST00000598359 METTL16Q86W50 562 aaKnown RBP16.69■□□□□ 0.26
SCAF1-203ENST00000598359 FOXP4Q8IVH2 680 aaPredicted RBP16.69■□□□□ 0.26
SCAF1-203ENST00000598359 SH3TC2Q8TF17 1288 aa16.69■□□□□ 0.26
SCAF1-203ENST00000598359 PAG1Q9NWQ8 432 aa16.69■□□□□ 0.26
SCAF1-203ENST00000598359 AGTPBP1Q9UPW5 1226 aa16.69■□□□□ 0.26
SCAF1-203ENST00000598359 CEP290O15078 2479 aa16.69■□□□□ 0.26
SCAF1-203ENST00000598359 FMNL1O95466 1100 aaPredicted RBP16.68■□□□□ 0.26
SCAF1-203ENST00000598359 ATP5JP18859 108 aa16.68■□□□□ 0.26
SCAF1-203ENST00000598359 SLC9C1Q4G0N8 1177 aa16.68■□□□□ 0.26
SCAF1-203ENST00000598359 LCORLQ8N3X6 602 aa16.68■□□□□ 0.26
SCAF1-203ENST00000598359 ARMC5Q96C12 935 aa16.68■□□□□ 0.26
SCAF1-203ENST00000598359 MYH1P12882 1939 aa16.67■□□□□ 0.26
SCAF1-203ENST00000598359 OSBPP22059 807 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms